Pyrgilauda ruficollis (rufous-necked snowfinch): 121359481
Help
Entry
121359481 CDS
T07608
Symbol
COL9A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121359481 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121359481 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121359481 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pruf00535
]
121359481 (COL9A3)
Proteoglycans [BR:
pruf00535
]
Extracellular matrix (ECM) proteoglycans
Others
121359481 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
121359481
NCBI-ProteinID:
XP_041334374
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MNESCSAAPPPSPTSSPQARPLSLAPAGATGLSGGEESLLCKLRAARRRRDLLDPGGERV
WLPGGEGERQSLGTMAGISALGLLSLCQLLATASAQSLPRIGPQGPPGPPGPPGPSGKDG
IDGEPGPPGLPGPPGPKGAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALG
PAGPPGPAGKGLPGPPGPPGPSGLPGGHGFRGPSGPFGLPGFPGPPGPPGPPGLPGALPD
GGGDLQCPALCPPGPPGPPGMPGFKGHTGHKGEPGEVGKQGEKGNPGPPGPPGIPGGVGL
QGPRGLRGLPGPMGPAGDRGDIGFRGPPGIPGPPGKAGDQGSKGPQGFRGPKGDTGKPGP
KGNPGARGLIGEPGMPGKDGRDGAPGLDGEKGDAAPMGAPGEKGPNGLPGLPGRAGIKGS
KGEPGSPGETGEAGSSGEPGIPGDVGIPGERGLPGPRGATGPLGLQGPTGARGVRGFQGP
KGASGEPGLPGPTGIRGETGDRGPLGVPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGE
PGKRGELGPKGVQGPNGTAGAPGIPGHPGPMGHQGERGVPGITGKPGPPGKEASEQHIRE
LCGEMINEQIALLAANLRKPLAPGMTGRPGPAGPPGPPGSTGTVGHPGPRGPPGYRGPTG
ELGDPGPRGDPGEKGDKGPVGQGIDGPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDP
GTPGTVGAQGTPGICDTSACMGAVAASTSKKS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagctgctctgctgctccccctccttctcccacctcctctcctcaagctcgg
cccctctcccttgctccagctggagccacaggtttatctggaggcgaggagtctctgctc
tgtaagctgagagccgcgaggaggaggagggatctgctggaccctggaggagaaagggtt
tggctgcctggaggagagggagagaggcagagcctgggcaccatggctggaatctctgct
cttgggctcctctccctgtgtcagctcttggccacagcatcggctcagtcccttccaaga
attggaccacaaggccctcctggaccaccaggaccccctggaccatctggcaaggacggc
attgatggagagccaggccctcctggtttgccaggcccaccagggccaaaaggtgcacca
gggaagcctggagctgcaggtgaagctggattgcctggccttcctggagtggatggttta
acaggaactgatggcccacctggcccaaatgggcctccaggagaccgtggtgcattggga
cctgctgggccacctggaccagctggcaaaggactaccaggacctccagggcctccagga
cccagtgggctccccgggggacatggatttcggggcccttctggaccttttggtctgcca
ggattcccagggcctcctggaccacctgggcctcctggtcttccaggtgcccttcctgat
ggcggtggggaccttcagtgcccagctctgtgcccaccaggtcccccaggccccccagga
atgccaggattcaagggacacactggtcacaaaggagagcctggtgaagtaggaaaacaa
ggagaaaagggtaaccctggccctcccggccctccagggattcccggcggtgttggcctg
cagggcccaagaggactgagaggcctccctggtccaatgggtccagctggcgacagaggt
gacattggattcagaggcccacctgggatcccaggacctccaggcaaagctggagaccaa
gggagcaaaggacctcagggattccgggggcccaaaggtgacactggtaaacctggacca
aaaggaaacccaggggctcgtgggctcataggagaacctggaatgcctggcaaggatggg
cgggatggagcccctggactcgatggtgagaagggcgacgcagctcccatgggtgctcct
ggagagaaggggccaaatggacttcctggtctgcctggaagagcaggtattaaaggctca
aagggtgaaccaggcagccctggagagacgggagaggcaggttcctctggagagccaggc
atccctggcgatgttggcatccctggtgagagaggtctgccaggacccagaggagcaact
ggaccactcggcctccaaggccccacgggagcacgaggtgtccgaggtttccaggggccc
aaaggtgccagtggagagcctggccttcctggcccgactgggatccgtggagagacagga
gacaggggtcctctcggtgttcctggtcccaaggggaaccagggcattgctggagcagat
ggcctcccaggtgacaaaggagagctgggtccctttggacctcctggccaaaaaggagag
ccaggaaaaagaggagaacttggtccaaaaggtgtccaaggacctaacgggacagctgga
gcaccagggatcccaggacatccaggacccatgggtcaccagggggagaggggtgtccct
ggcatcacaggaaaacctggacctcctggcaaagaggccagtgaacaacatatcagagaa
ctctgtggggaaatgataaatgagcaaattgcactgctggctgctaacctgaggaagccc
ttggctcctggaatgacgggacggcccggcccagctgggcccccaggccctcctggaagc
acgggaactgttgggcatcctggtcctcgtgggccccctgggtacagagggccaacagga
gagcttggtgatcctggacccagaggtgaccctggtgaaaagggagacaaaggacctgtt
ggccaaggcatcgatgggcctgatggtgaccaaggactgcagggaccacctggtgtgcct
ggcattactaaaaacggccgtgatggtgctcagggtgaacccgggctgccaggggatcct
gggactcctgggactgttggggctcagggaactccaggaatatgtgacacgtcggcttgc
atgggagctgttgcagcatcaacttccaaaaaatcataa
DBGET
integrated database retrieval system
