KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121359554
Entry
121359554         CDS       T07608                                 
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
  KO
K24357  collagen type XX alpha
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
SSDB
Motif
Pfam: fn3 VWA Collagen Pur_ac_phosph_N Ig_DSCAM-DSCAML_C VWA_2 FN3_Tor_3rd DUF4998 CBM_4_9
Other DBs
NCBI-GeneID: 121359554
NCBI-ProteinID: XP_041334509
LinkDB
Position
Unknown
AA seq 1470 aa
MLIHTWVFLACLPVVSHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGNISGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELRNASQTR
NNRRNAGAVSGKNLTSSAAEHSGVAEATPPPLNTALSHPAKDRAEKKRQKGIQPKSSGET
TRNQPSVEASVPETASTTPKSSQHTPANVERESPGKEKPPKDSLRRGSQFQCDTPAMTDI
VLLVDGSWSIGRNNFRLIKEFLSNLISPFSIAEDKIRVGLSQYSSDPRTEWDLSAYSTRE
QLLEAVRNLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAEKLVILLTDGKSQDDANLAA
QTLKNLGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVGKLTRVLCTRIK
ERSHKETTGSTVKDTPVNTGPQLSPTDLKISAVTSKSMHLAWSPPLRPPKKYRVVYYPSK
GGAPKEVVLEGAVSSLQLSNLTSHTEYLVSVIPVYDSAAGDALRGVTSTLPLSSPRSLRV
SELSHNSLRLSWEAAQGATHYLVLCSAAPDGAEDYTTEVKVTQPEVLLEGLSPSTGYSVA
VYAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEPAAPAVRAHHLTYVSSR
GGNAGQVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPPPRALKV
TELSGNSLRLQWEAVAASDVVVYQIKWSTASGEKPQELSLAGNVATAVLSGLQKNTDYKI
SIWAYYKDGARSDTVSVHHRTNSRSPPTNLFIDSETPSSLQVHWTPPDGRVQHYKITYSP
VSDAAAQQTIMAPGKSSSVTLQSLLPDRAYKVTISAIHYTGESESTSTTGRTAPVLSKFP
SIRGFVPPKAEACPTITSTEGSIRGFDMMEVFGLVEKEYSSIKGVAMEPFVFSGSRTFTL
FRDIQLTQRTSDVHLFAIPPEHTIVILLRLLPDTPKEPFAVWQVTDEDFQPLLGVNLDPS
KKSLTYFNHDYKADLQEVSFDEQEVKKIFYGSFHKVHVAVSHFKVKLYVDCKKTAEKPLN
TLGSISTAGFIMLGKVTRTRGPRSGSVPFQLQSLQILCSSVGAEQDRCCDLPALRDEDTC
PTLAPACSCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPAGPSGQQG
SPGSQGITVQGPVGPPGIKGEKGDTGIPGMQGIPGVQGAPGRDGLQGAKGVRGLEGTAGP
PGPPGPRGFQGATGTRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVSQAC
ERMIQTHVLKFDSFIHEHARKPVPIWEERLKPGEPGPPGPPGPPGNSGERGEKGTPGQPG
KDGYPGERGAPGPKGEKGMSGASEEGSQGPRGRTGPPGEVVQGKPGPKGYPGNAGPPGFP
GVRGQPGQPGPPGGCDFSGCYEADRRDFVP
NT seq 4413 nt   +upstreamnt  +downstreamnt
atgctgattcacacttgggtctttcttgcctgcctgcctgtggtgagccatgtctgggga
cgcgtgggccaagggtcgggccggctgaaactcactgtcctttcagaagaccggctccag
atgaagtggaaagagactgaggggaatatcagtggctacaaagttcgggtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaagactcccaaagccacagtggga
gggctgagccccaccaaggaatacaccctgcaggtctacgtgctcaatggctcccaggaa
gccctgtttgccaagaggaaatttgtgatagaggagctcagaaatgcatcccagacaaga
aacaaccgaaggaacgcaggagctgtgtcaggaaagaatctcacctcctcggcagctgag
cacagtggggtggctgaggccaccccaccacccctgaacactgccctgtcacacccagca
aaggacagagctgaaaagaaaaggcagaaggggattcagccaaagagctcaggagaaacg
acaaggaaccagcccagtgtggaggccagcgtgccagaaacagcatcaacaaccccaaaa
tcatcccagcacactcctgcaaacgtggagcgagagtctccaggaaaagaaaaaccccca
aaggattcactgagacgaggctcccagtttcagtgtgacacacctgccatgactgacatt
gtcctacttgtggatggctcctggagcatcgggcgcaacaatttcaggcttattaaggag
ttcctgagcaatctgatttccccattcagtattgcagaagacaagatcagagtagggctg
tcccagtacagcagtgacccccgcacagagtgggatctgagtgcttactccacgagggaa
cagctgctggaggccgtgaggaatctgcggtacaagggcggcaacacctttacaggtctg
gcactgacccacgtcctggagcagaatctgaaaccagatgctggtgcccggctggaggct
gagaagttggtaatcctcctgactgatgggaaatcccaggatgatgccaacctggctgct
cagaccttgaaaaacctgggcatagagatatttgccattggggtgaagaacgcggacgag
gcggagctgcggcaggtggcctcggagccgctggagctcaccgtctacaacgtgctggac
ttccccctgctcagctccctggtgggcaaactcacacgggtcctgtgcaccaggatcaag
gagaggagccacaaggaaaccacaggcagcactgtgaaagacacccctgtgaacacgggt
ccccagctcagcccaactgacctgaaaatatctgctgtgacctccaagagcatgcacttg
gcctggagccctcctctgagaccaccaaagaaatacagggttgtgtattatccatccaag
ggtggggcccccaaagaggtggttttagagggagcagtgtcctccctgcagctgtccaac
ctgacctcacacacagagtacctggtgtcggtgatccccgtgtacgacagcgccgcgggg
gacgcgctgagaggcgtcacctccacactgcctttgtcttcccctcgctccctgcgcgtc
tctgagctgagccacaacagtctgaggctgagctgggaagcagctcagggagccacacac
tacctggtgctctgctctgcagcccctgatggagcagaggactatacaacagaggtgaag
gtgacccagcccgaggtgctgctggaggggctgtcccccagcactgggtactccgtggca
gtgtatgccatgtatggggaagatgccagtgatccagccagcatccaggaaaccaccttg
gccttgagccctcccaggtacctgagcttctcggagctgagccacgcgtccgtgcgggtc
agctgggagcccgcggccccggccgtgcgcgctcaccacctcacctacgtctctagcaga
gggggcaacgctggacaggtggaagttcctggcactgcaacatccactgtcctgcgacct
ctgtcctccctcacacaatacttcatcagtgtcagatccacgtacgatgaaggggactcc
tttccaattactggcaatgtcaccaccttgaaggtcccccctcctcgtgctctgaaggtc
accgagctctctgggaacagcctccgcctgcagtgggaagctgtggctgcctcggacgtg
gttgtctatcagatcaagtggagcacagccagtggagagaagcctcaggagctctccctg
gctggaaatgtggccacagccgtcctgtctggcctgcagaagaacactgactacaaaata
tccatctgggcctactacaaagatggtgctcgaagtgacaccgtttctgttcaccacagg
accaattcccggagcccacccaccaacctcttcatcgactccgagacccccagcagcctc
caggtgcactggacccctcctgatggccgagttcagcactacaaaatcacctacagccct
gtttctgacgctgctgcccagcaaactatcatggctcctggcaaaagcagcagtgtgacc
ctgcagtccctgctgcctgaccgagcctacaaggtgacaatttcggccatccactacacg
ggagagagcgagagcacctccacgacgggccggacagctcctgtgctgtctaaattccct
tccatccgaggattcgtcccacctaaagcagaggcctgccccaccatcacctccacggaa
ggttccataagaggatttgatatgatggaagtttttggcttggtagagaaggaatattct
tccattaaaggcgtggccatggagccctttgtattcagtggctcccgcaccttcaccctg
ttcagggacattcagctcacccagaggaccagtgatgtccacctgtttgccatcccaccc
gagcacaccatcgtcatcctgctgcgcctgctgcccgacacgcccaaggagccctttgcc
gtgtggcaggtcacggacgaggacttccagcctctcctgggtgttaacctggaccccagt
aagaaatccttgacctatttcaatcatgactacaaggctgatttacaggaagtctccttt
gacgagcaggaagtgaagaagatattttatgggagctttcataaggtgcacgtggccgtg
agccacttcaaggtcaagctctatgtggattgtaagaaaacagcggagaagcccctcaac
accctgggcagcatctccactgctggcttcatcatgctgggaaaagtgacccgcaccaga
gggccccggagcggctccgtgcccttccagctgcagtctctgcagatcttgtgcagcagt
gtgggggcagagcaggacagatgctgtgatctccctgcgctgagggatgaagacacctgc
cctaccttggctcctgcctgttcttgcacttctgggcgcccaggcttgccaggaccccca
gggccccctggcagccctgggaggagaggacctcagggcgagcagggggagccaggaccc
aagggtgagccaggcccacctggacaagtaggaccagcgggtcccagtggccagcaaggc
tctccaggctcccaaggaatcacagtccagggccctgtggggccaccaggaattaaagga
gagaaaggagatactggaatccctggcatgcagggcattcctggtgtgcagggagctccg
ggcagggatggacttcaaggtgcaaagggggtgaggggactagaaggcacagctgggcct
ccaggacctcctggaccaaggggtttccaaggagccacaggcacccgaggcagcagtggt
gagaagggacctccaggtgatgttgggccaacagggctgccaggtcccaaaggagaaaga
ggagagaaaggggaaccacagtctttggccacaatttaccagcttgttagccaggcctgt
gagcggatgattcagactcatgtgttgaaatttgattcattcatacatgaacacgcaagg
aagccagttcccatctgggaggaaaggttaaaaccaggagaaccaggaccaccaggtcct
ccaggcccacctgggaacagtggagaaagaggagaaaagggcacccctggacagccaggc
aaagatgggtatccaggagagagaggtgccccagggcccaaaggagagaaagggatgtct
ggagccagtgaggaagggagccaaggacccagaggcagaacaggcccaccaggagaagtt
gtgcaggggaaaccaggtcccaagggttaccctgggaatgctggtcctccaggtttccct
ggtgtcagagggcagcctgggcagcctgggcctccggggggctgtgatttctctggatgt
tatgaggctgatagaagagattttgtcccctga

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