Pyrgilauda ruficollis (rufous-necked snowfinch): 121359740
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Entry
121359740 CDS
T07608
Symbol
CACNA1E
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04010
MAPK signaling pathway
pruf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121359740 (CACNA1E)
04020 Calcium signaling pathway
121359740 (CACNA1E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121359740 (CACNA1E)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121359740 (CACNA1E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121359740
NCBI-ProteinID:
XP_041334835
LinkDB
All DBs
Position
Unknown
AA seq
2273 aa
AA seq
DB search
MARFGEAVAGRLGSGDGGSDQNRSRQGAPAPAGGSPGAFKQTKAQRARTMALYNPIPVRQ
NCFTVNRSLFLFGEENIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPM
SRRLEKTEPYFIGIFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGTHF
NTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGKLHRACYTNNSGELEELDPPHPCGVQGCPPGYECREWIGPNDGITQFDNILFAVL
TVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERER
VENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNSGTSALDVLRRATIKRNRT
DAMSGDEHCVDISSVGNPSSHSGLKGARVDGASYLRHKERLLRISVRHMVKSQVFYWIVL
SLVALNTACVAIVHHNQPAWLTHFLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCF
DCGVTVGSIFEVVWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSI
ISLLFLLFLFIVVFALLGMQLFGGRFNFMDGTPSANFDTFPAAIMTVFQILTGEDWNEVM
YNGIRSQGGVRSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAF
NQKHALQKAKEVSPMSAPNMPAIERDRRRRHHMSMWEPRSSHLRERRRRHHMSVWEQRTS
QLRRHMQMSSQEGINKDEPPLINPHASIFRRKRPGEGVTLEKCAEEQGKGEREGPEQPVP
GANPGGGEDRTSPRAKRDVWQQKSCHGNCEPGEQDGAGGSIEDRARMRQSQRRSRHRRAR
VEGKDTAGILGSRSASQEMGLEEASAAEGTQDGDRRGDVAAAEALIPGEPEASGESIRTN
GVPAGDADLIGTTKKGSPPHVAPELSQGKTGTLTEQDCSSPDTSEQALLEHSRSVSRSEP
DLSSITPNTEKATESTAIMIDVHDSAVVQISNKTDGEASPLKEAETKEDEEEMEKKKRKK
EKSETGKAMVPHSSMFIFSTTNPVRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLT
NSDRNKVLRYFDYVFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFIVVVGALVAFA
LANALGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKL
FMFIFAVIAVQLFKGKFFYCTDSSKDTQKDCIGNYVDHEKNKMEVKCREWKRHEFHYDNI
IWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIF
VALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSP
SFEYTIMAMIALNTVVLMMKYYSAPYTYELALKYLNIAFTMVFSLECVLKIIAFGFLNYF
RDTWNIFDFITVIGSITEIILTDTKLVNTSSFNMSFLKLFRAARLIKLLRQGYTIRILLW
TFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESHINRHNNFRSFLGSLMLLFR
SATGEAWQEIMLSCLEGKGCEPDTTATSGQNENERCGTDLAYVYFVSFIFFCSFLMLNLF
VAVIMDNFEYLTRDSSILGPHHLDEFVRIWAEYDRAACGRIHYTEMYEMLTLMSPPLGLG
KRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADWQQLDSELQKE
ILTIWPHLSQKMLDLLVPMPKTSDLTVGKIYAAMMIMDYYKQSKAKKQRQQLEEQKNAPM
FQRMEPSSLPQEIISNAKALPYLQQDTLSGLSSRGGFPSLSPLSPQEIFQLACMDPAQEQ
FQEHQSLEPEVREFQRVQPSNRGSYLPVDTQDHAVSGRASSMPRLTVDPQVVTDTSSMRR
SFSTIRDKRPNSSWLDEFSMERSSDNTYKSRRRSYHSSLQLSARRLNADSGHRSEGHRSG
RERGRSKERKHLLSPDISRCNSEERSPQAQEESPERRRESRSPSEGRSQTPSRQGMGSLS
ESSIPSISDTSTPRRGRRQLPPVPPKPRPLLSYASMLRHAGDTSPPADESEGGSPLLSST
LDPNTAGPAESSSSPAGKQSRQSTPQRYISEPYLALHDDSHASDCGEEETLTFEAAVATS
LGRSNTIGSAPPLRHSWQMPNGHYRRRRRGAAQGVMCGASIDVLSDTEEDDKC
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttggggaggcagtggccggcaggctgggctccggagatgggggctccgac
cagaaccggagccggcaaggagctcctgcccctgcgggagggagcccgggagccttcaag
caaaccaaagcgcagagagcccggactatggctctgtacaaccccatccccgtccggcag
aactgcttcaccgtcaacagatcgctcttcctctttggggaagagaacatagtcaggaaa
tacgccaagaagctcatcgactggcctcccttcgagtacatgatcctggcgaccatcatt
gccaactgcatcgtgctggccctggagcagcacctccccgaggatgacaagacgcccatg
tcacggagattagagaagacagagccctacttcattgggattttctgcttcgaggctggg
attaagatcgtggccctgggcttcgttttccacaagggctcgtacctgcgcaacggctgg
aacgtcatggacttcatcgtggtcctcagcggcatcctggccacggccgggacacacttc
aacacccacgtggacctgcggacgctgcgggccgtgcgcgtgctcaggccactgaagctc
gtctcgggcattcccagcttgcagattgtcctgaaatccatcatgaaggccatggtgcct
ctcctgcagatcggcctgctgctcttttttgctattctcatgtttgccatcatcggcctg
gagttctacagcgggaagctgcaccgagcctgctacacaaacaattcaggtgaactagag
gagctggaccctccccatccctgcggggtgcagggctgccccccgggctacgagtgccgg
gagtggattggtcccaacgatgggatcacgcagttcgacaacatcctctttgctgtgctg
accgtcttccagtgcatcaccatggaagggtggaccacagtcctgtacaacaccaatgat
gccttaggagccacctggaactggctgtacttcatccccctcatcatcattggatccttc
ttcgtcctcaaccttgtcctgggagtgctgtcaggggagtttgccaaagagagagagcgt
gtggagaaccgccgagccttcatgaagctgcggcggcagcagcagatcgagcgggagctc
aacggctaccgggcatggatagacaaagcggaggaagtcatgctggctgaagagaacaaa
aattcggggacctcagccttagacgtgctcaggcgagccaccatcaagcggaaccgcacg
gatgccatgtcgggtgacgagcactgtgtcgacatctcctccgtgggtaacccctcgagt
cactctggcctcaaaggtgccagggtggacggtgcctcctatttaaggcacaaggagcga
ctcctgcgcatctccgtccgccacatggtcaaatcccaggtcttctactggattgtcctg
agcctggtggctctcaacactgcctgcgtggccatcgtccatcacaaccagccagcctgg
ctcacccacttcctctactatgcagagttcctgtttcttgggctcttccttctggagatg
tccttaaagatgtacgggatggggccacgtctttacttccactcttccttcaactgcttc
gactgtggggtcacagtgggaagcatcttcgaagtggtttgggctatattcaggccagga
acctcttttgggatcagtgtcctacgagctcttcgtctcctgcggatatttaaaataacc
aagtactgggcatccctgaggaatttggtggtctcgctgatgagctccatgaaatctatt
atcagtctgctcttcctcctcttcctcttcattgtagtctttgccctgctgggaatgcag
ctgtttggaggcaggtttaacttcatggatgggactccctcggccaactttgacaccttc
cctgcagccatcatgacggtgtttcagatcctgacaggcgaggactggaacgaggtgatg
tacaacggcatccgctcccagggaggcgtgcgctcagggatgtggtcctccatctacttc
atcgtcctcaccttgtttgggaactatactctgctgaatgtcttcttggccattgctgtg
gacaacctggccaacgctcaggagctcaccaaggacgagcaggaggaagaggaggccttt
aaccagaagcacgcccttcagaaagccaaagaagtcagccccatgtctgccccaaacatg
cctgctatcgaaagagacaggcggaggagacaccacatgtcgatgtgggagccacgcagc
agccacctgcgggagcgtcgccggcggcaccacatgtcggtgtgggagcagcgcaccagc
cagctgcgccggcacatgcagatgtccagccaggagggcatcaacaaggacgagccgccc
ctcatcaacccccacgccagcatcttccgcaggaagagacccggggagggcgtcaccctg
gagaagtgcgctgaggagcagggcaagggagagcgcgagggacccgagcagccggtccca
ggggccaaccccggcggtggggaggacaggacatcgccccgggccaagcgggacgtgtgg
cagcagaagtcttgccatgggaactgtgagccaggagaacaggacggggcaggaggcagc
atcgaggacagggcgaggatgaggcagagccagcggcgcagccggcaccgcagagcccgc
gtggaggggaaggacacggctggcatcttggggagccgctcggccagccaggagatgggg
ctggaggaggccagcgccgcagaggggacacaggatggggaccggcgtggggacgtggct
gcggcagaggcgctgattccgggggagccagaggcgagcggggagtccatcaggacaaac
ggggtccctgctggcgacgccgatctgattgggaccaccaagaagggcagccccccgcac
gtcgcgcccgagctctcccaggggaagacgggcaccctgacggagcaggactgcagcagc
ccggacacgagcgagcaggcgctgctggagcacagccgcagcgtgagccgcagcgagccc
gacctctcctccatcacccccaacaccgagaaggccaccgagagcaccgccatcatgatc
gatgtccacgactccgctgtggtacagattagcaacaagacagatggcgaagccagcccc
ttaaaggaggcagagaccaaagaggatgaggaagaaatggagaagaagaagaggaagaag
gaaaagagcgagacgggcaaagccatggtgccgcacagctccatgttcatcttcagcacc
accaacccggtgaggagggcctgccactacatcgtgaacctgcgctacttcgagatgtgc
atcctcctggtgatcgctgccagtagcatcgccctcgccgccgaggatcctgtcctcacc
aactccgaccgcaacaaagtgctgaggtactttgactacgtcttcactggtgtcttcacc
ttcgagatggtgatcaagatgattgatcagggcttgatcctgcaggatggctcctacttc
cgagacctctggaacatcctggatttcatcgtggtggtgggagcgctggtggcttttgcc
ttggcgaatgctttggggaccaacaagggccgggatatcaagaccatcaagtctctccgt
gtgctgcgggtcttgaggcccctgaaaaccatcaagagactgcccaagctgaaggcggtt
tttgactgtgtcgtgacgtctctcaagaacgtcttcaacatcctcattgtctacaagctc
ttcatgttcatcttcgctgtcatcgccgtgcagctcttcaaggggaagttcttctactgc
actgacagctccaaggacacgcagaaggactgcatagggaactacgtggaccatgagaag
aacaagatggaggtgaaatgccgggagtggaagcggcacgagtttcactatgacaatatc
atctgggctctgctcaccctgttcacggtgtccaccggcgaggggtggccccaggtgctg
cagcactcagtggatgtgacggaggaggaccgcgggcccagccgcagcaaccgcatggag
atgtccattttttatgttgtctacttcgtggtcttccctttcttctttgtcaacattttc
gtggctctcatcatcatcaccttccaagagcaaggagacaaaatgatggaggagtgcagc
ctggagaagaacgagagggcctgcattgactttgccatcagcgccaagcccctgacgcgg
tacatgccccagaacagacacaccttccagtaccgcgtgtggcacttcgtggtgtccccg
tccttcgagtacaccatcatggccatgatagccctcaacaccgtggtgctcatgatgaag
tactattctgctccatacacctatgagctggccctgaagtacctgaacattgccttcacc
atggtgttctccttggagtgcgtcctcaagatcattgccttcggcttcctgaattatttc
cgggacacctggaacatctttgacttcatcacggtcatcggcagcattacggagatcatc
ctgacggacaccaagctggtgaacaccagcagcttcaacatgagcttcctgaagcttttc
cgggctgctcggctcatcaagctgctccgccagggttacaccatccgcatcctgctctgg
acgtttgtgcagtccttcaaggcactcccctacgtctgcctgctgattgccatgctcttc
ttcatctacgccatcattgggatgcaggtttttggcaatatcaaactagatgaggaaagc
cacattaaccggcacaacaacttccgcagcttcctgggctccctcatgctcctcttcagg
agtgccactggagaggcgtggcaggagatcatgctgtcctgcctggagggcaaaggctgc
gagccggacaccacggcgacgtccgggcagaacgagaacgagcgctgcggcactgaccta
gcctatgtttacttcgtgtccttcatcttcttctgctccttcctgatgctcaacctgttt
gtggcagtcatcatggacaactttgagtacctgacacgggattcctccatcctgggccct
caccatctggatgagtttgtccggatttgggcagagtatgaccgagcagcgtgtggccga
atccattacactgagatgtatgaaatgctgactcttatgtcaccaccgctaggcctcggc
aagagatgtccttccaaagtggcctataagagactggtgctgatgaacatgcccgtggct
gaggacatgacagtccacttcacctccaccctcatggccctgatccgcacagccttggac
atcaaaattgccaaaggtggtgcagattggcagcagttggactctgagcttcaaaaggag
atcctgaccatttggcctcacctctcccagaagatgcttgacctgttggtacccatgcca
aaaacctctgacctgactgttgggaaaatatatgcagccatgatgatcatggattactac
aagcagagcaaggcgaagaagcagcggcagcagctggaggagcagaaaaatgcccccatg
ttccagcgcatggagccatcctctctgccacaggaaatcatctccaatgccaaggctctg
ccgtacctccagcaggacaccctctcgggcctgagcagccgaggcgggttcccctcgctg
agcccgctctcaccacaggagatcttccagctggcgtgcatggatccggcccaggagcag
ttccaggagcaccagtctctggagccagaggttagggagtttcaaagagtgcagccctct
aaccgtggcagctaccttcccgtggacactcaggaccacgctgtctctgggagggcctcc
tccatgcctcgtctcactgtggatccccaggtggtgacagacaccagctccatgcggaga
tcgttctccaccatccgggacaagcggcccaacagctcctggctggatgagttctccatg
gagcgcagcagcgacaacacctacaagtcccgccggcgcagctaccactcctcgctccag
ctgtctgcccggcgcctcaacgctgactcgggccaccggtccgaggggcaccgctcgggc
agggagcggggccgatccaaagagcgcaagcacctgctgtcccctgacatctcccgctgc
aactccgaggagaggagtccccaggcgcaggaggagtcgccggagcggcggcgcgagtcc
cggtcacccagcgagggcaggtcacagacacccagcaggcagggcatgggctccctgagc
gaaagctccatcccctccatctcggacaccagcacgccccggcgaggccgccgccagctg
ccgccggtgccccccaagccgcgtcccctcctgtcctacgcctccatgctgcgacacgcc
ggggacacctctcctcccgccgacgagagcgagggcggctctccgctgctctcctccacc
ctggatcccaacacggccggcccggccgagtcttccagctcgccggcggggaagcagagc
cggcagtccacgccgcagcgctacatctcggagccctacctggcgctgcacgacgactcg
cacgcctcagactgcggtgaggaggagacgctcaccttcgaggcggccgtggccaccagc
ctgggccgctccaacaccatcggctcggcgccgccgctgcggcacagctggcagatgccc
aatgggcactaccggcggcggaggcgaggggcagcgcagggcgtcatgtgcggggccagc
atcgacgtgctcagcgacaccgaggaagatgacaagtgctag
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integrated database retrieval system
