Pyrgilauda ruficollis (rufous-necked snowfinch): 121359776
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Entry
121359776 CDS
T07608
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121359776 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pruf03041
]
121359776 (USP39)
Spliceosome [BR:
pruf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
121359776 (USP39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
121359776
NCBI-ProteinID:
XP_041334923
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MCRTKPWLMSSRPPGRQRQPGAAVVAAASIPVPAAGVGTGGAAPLRAPGAAARRQGTPQR
AGAVAHCHSAAAAHAHSNADRFAPRAAHAQIARTAAMSSRGRRDRDPREPREPRGASAAR
ASSRSRRDADGERPRGRRDAERERARREAAEALPVDLARVKREPGTGTGTGGGVWGGSGT
AAPVRVKREREPDGDSDPEPEPAVRYGRFDPEDQRSRHCPYLDTINKSVLDFDFEKLCSI
SLSHINVYACLVCGKYFQGRGLKSHAYIHSVQLSHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTAQHIAHLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNV
PPLRNYFLEEENYRHIQRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDGVEFLSWFLNALHAALGGTKRKKKTIVTDVFQGSMRIFTKKLPHPDLP
AEEKAQLLQNSEYQERMVESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGST
EKEYKTYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSE
EVQATHSHTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSE
AYIQIWKRREEDETNQQGA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgcacgaagccgtggctcatgtctagccgtccccccggccggcagcgccagccg
ggggccgccgttgtggccgccgcctccatcccggtaccggcggccggggtcggtaccggg
ggcgcggcgcctttaagagcccccggtgccgccgcgcgccggcaggggacgccgcagcgc
gcaggcgcggtagcacattgtcactcagcggcggccgcgcatgcgcacagtaacgcagac
cgatttgcccctcgcgcggcgcatgcgcagatcgcccgaaccgccgccatgtcgagccgc
gggaggcgggaccgcgacccccgggagccccgggagccccgcggggcctccgccgcccgc
gcctcctcccgcagccgccgcgacgccgatggcgagcgcccgcggggccggcgggacgcc
gagcgggagcgcgcgcggcgggaggcggcggaggcgctgccggtggatctcgcgcgcgtc
aagcgggaaccgggcaccggcaccggtaccggcggcggcgtctggggaggctccggcacc
gccgcgcccgtgcgggtgaagagggagcgggagccggatggagattccgaccctgagccc
gagcccgccgtgcgctacgggcgcttcgaccccgaggaccagcgcagccggcactgcccc
tacctggacaccatcaacaagagtgtcctggacttcgactttgagaagctctgctccatc
tccctgtcccacatcaacgtctacgcctgcctggtctgcgggaagtacttccagggccgc
gggctgaagtcgcacgcctacatccacagtgtgcagctgagccaccacgtgttcctcaac
ctgcacacgctcaagttctactgcctgcccgacaactacgagatcatcgactcctccctc
gaggacatcacgtatgtgctgaagcccaccttcacagcccagcacatcgcccacctggac
aaacaggccaagctgtcccgggcctacgatggcaccacgtacctgcctggcatcgtgggg
ctcaacaacatcaaggccaacgactatgccaacgctgtgctgcaggccctgtccaacgtg
cctcccctgaggaattacttcctggaggaggagaactaccggcacatccagcgcccgccc
ggggacatcatgttcctgctggtgcagcgcttcggggagctcatgaggaagctctggaac
cccaggaacttcaaggcacacgtgtccccccacgagatgctgcaggccgtggtgctgtgc
agcaagaagaacttccagatcaccaagcagggggatggggtggagttcctgtcctggttc
ctgaacgcgctgcacgccgcgctgggcggcaccaagaggaaaaagaagaccatcgtcacc
gacgtgttccagggctccatgcgcatcttcaccaagaagctgccacaccctgacctgccc
gcggaggagaaggcgcagctgctgcagaacagcgagtaccaggagcgcatggtggagtcc
accttcctgtacctgaccctggacctgcccacggcgccgctctacaaggacgagaaggag
cagctcatcatcccccaggtgcccctgttcagcatcctggccaagttcaacggcagcaca
gagaaggagtacaagacctacaaggagaacttcctgaagcgcttccagctcacacgcctg
cccccctacctcatcttctgcatcaagcgcttcaccaagaacaacttcttcgtggagaag
aaccccaccattgtcaacttccccatcacgaacgtggacctgcgggagtacctgtcggag
gaggtgcaggccacgcactcccacaccacctacgacctcatcgccaacatcgtgcacgac
gggaagccctcggagggctcctaccgcatccacgtcctgcaccacggcacagggaagtgg
tacgagctgcaggacctgcaggtgaccgacatcctgccccagatgatcaccctgtccgag
gcctacatccagatttggaagcgacgcgaggaggatgagacgaaccaacaaggcgcctga
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integrated database retrieval system
