Pyrgilauda ruficollis (rufous-necked snowfinch): 121359871
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Entry
121359871 CDS
T07608
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121359871 (SNRNP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pruf03041
]
121359871 (SNRNP40)
Spliceosome [BR:
pruf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
121359871 (SNRNP40)
Complex C
U5 SnRNP specific factors
121359871 (SNRNP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
121359871
NCBI-ProteinID:
XP_041335068
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MKKISQTPTLFPAAWDSAPAAPGAAPAPGPDLPLVPVPAKRPRHDLPGAPGTGGAGGQPA
AGALLQAVTGEREGRVGGEPGGMEGWTQQWGWSILHFAGTPEISSIFLLWDIRKKAAVQT
FQNTYQVLAVTFNDTSDQIISGGIDNDIKVGPLVSWARGLCQGCLSLSPSAAGSASVAVR
IWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRIL
YKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatctcacagacaccaaccttgtttcctgcagcctgggattcggcccccgcc
gcccctggcgccgctcccgcgcccggccccgacctcccgctcgtccccgtgcccgccaag
cggccccgccatgacctgccgggggcgccgggcacgggcggcgcaggggggcagcctgcg
gccggagctctgctgcaggcggtaacgggggaacgtgagggcagggtgggaggagagccg
ggtgggatggagggctggacccagcagtggggatggtccatcctgcactttgctggaacc
ccagagatcagctccatctttctgctgtgggatatcaggaaaaaagctgctgtccagaca
ttccagaacacctaccaggtcctggctgtcaccttcaatgacaccagtgaccagatcatc
tctggaggcatcgacaatgacatcaaggtaggacccttggtgtcctgggcacgggggctt
tgccagggctgcctgtccctgtccccctcagctgctggctctgcttctgttgcagttcgg
atctgggacgtcaggcccttcgcccccaaggagagatgtgtgaagattttccagggaaat
gtccataattttgaaaagaaccttctgaggtgctcctggtccccagatggcagcaaaatt
gcagggggctctgctgacaggtttgtgtacgtgtgggacaccacctccaggaggatcctg
tacaagctgcctggccatgctggctctgtcaatgagctggccttccaccctgaggaaccc
atcattctctctgcatccagtgacaaaaggctctacatgggggagatccagtga
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