Pyrgilauda ruficollis (rufous-necked snowfinch): 121359880
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Entry
121359880 CDS
T07608
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121359880 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121359880 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121359880 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pruf00535
]
121359880 (COL9A2)
Proteoglycans [BR:
pruf00535
]
Extracellular matrix (ECM) proteoglycans
Others
121359880 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
121359880
NCBI-ProteinID:
XP_041335080
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MARATTLVSQLWLLLQASCLCLAQLRGPPGEPGPRGPPGPPGVPGADGIDGDKGPVGSAG
SPGEPGAPGPDGPPGKPGIDGLTGAKGEPGPTGRPGIKGQPGLPGPPGLPGPSLPGPPGL
PGQVGLPGEIGVLGPKGDPGPDGPRGPPGPPGKPGLPGHLQGVEGSADFLCPTSCPPGPK
GPQGLQGLKGHRGRPGALGEPGKQGEPGPKGDVGASGEQGVPGPPGPQGLRGYPGMAGPK
GETGPAGYKGMVGSIGAAGRPGREGPKGPPGGPGDKGELGGRGIRGPQGDIGPKGENGLP
GIDGKDGTPGIPGVKGGTGQAGRPGTPGHRGQAGLPGQPGSKGGPGDKGESGPRGHPGVT
GAPGQLGEPGPRGEQGPQGVPGPKGDRGERGLVGPPGEPGRVGPKGEQGPPGIPGPQGLP
GVKGDKGSPGKTGPKGSIGDPGVHGLAGLKGEKGESGEPGPKGQQGIQGDLGFPGPSGDA
GAPGIRGYPGPPGPRGLVGERGVPGMPGPRGTAGRDAGDQHIVDVVLKMLQEQLAEVAVS
AKRAALGGVGAMGPPGPPGPPGPPGDQGPHGPMGPRGVPGILGAAGQIGNVGPKGKRGEK
GERGEVGRGHPGMPGPPGIPGLPGIPGHAVDGKAGERGLPGSPGEAGRPGSPGPAGLPGF
CEPAACLGASAYAAARLTEPGSVKGPSF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgccaccaccctggtgtcgcagctctggctcctgctccaagcctcctgcctc
tgcctggcccagctccgagggcccccaggagagcctggcccacgagggccccccggtccc
ccaggagtgccgggagccgatggcatcgatggtgacaaaggccctgtaggatctgctggc
tccccgggcgagcctggagctcctggtccggatggacccccagggaagccgggaattgat
ggcctgacgggagccaaaggggagccaggacccactggcaggccaggaattaaaggccag
cctggactcccagggccaccagggctccctggtccttcactgccaggaccccccgggctt
ccaggccaggttggacttcccggggagatcggagtgctgggacccaagggtgaccctgga
cccgatggcccgaggggtcccccaggccctccagggaaacctggacttccaggacacctc
caaggcgtggaaggcagcgctgatttcctgtgccccaccagctgccccccaggtcccaag
ggcccccagggactgcagggactgaagggacacagaggccgccccggtgccctcggagag
cctggcaagcagggagagccgggccccaagggggatgttggtgcctctggagaacaagga
gtcccaggccctccgggacctcagggcctcagggggtatcctggcatggcaggacccaag
ggggagacgggccctgctggctacaagggcatggtcgggagcatcggagccgccgggcgg
ccgggcagggaaggccccaagggaccacctgggggccctggtgacaagggagagctgggt
ggccgtggcatcaggggaccgcagggtgacatcggccccaagggggagaatggtctcccg
ggcatcgatggcaaggatggcaccccaggtatcccaggagtgaagggtggcacaggacag
gccggacgcccgggaacaccgggacaccggggacaagctggtttgccgggccagccggga
agcaaaggtggcccaggtgacaagggtgaatcgggtcctcggggccaccccggtgtcacc
ggtgccccagggcagcttggcgagcccggacctcggggtgagcagggcccgcagggtgtc
cccgggccgaagggtgacaggggcgagcgtggcctcgtgggaccccccggggagccgggc
agagtggggccaaagggcgagcagggcccaccaggcatcccaggaccccaaggcttgcct
ggagtcaaaggagacaagggctctccagggaaaaccggccccaaaggcagcattggagat
ccaggtgtccacggcctggcagggctcaagggagagaagggggagtcaggagagccagga
cccaagggacagcaaggcatccagggagacctcggctttcccggcccctcgggggatgca
ggagcaccgggaattcggggctatcccggcccgcccggcccgcgggggctggtgggggag
cgtggagtgccgggaatgccgggcccgaggggcacagccggcagggacgctggggaccag
cacatcgtggacgtggtgctgaagatgctgcaagagcagctggcagaggtggccgtgagc
gccaaaagagccgccctgggtggggtcggggccatgggaccccccggcccccccggcccc
ccagggccacccggtgaccagggaccccacggccccatgggaccccgaggtgtccccgga
atcctgggagctgccgggcagatcggcaatgtcggacccaaaggaaagagaggagagaag
ggcgagcggggagaggttggccgtggccacccaggaatgccgggtcctccagggatccca
ggtctcccgggcatcccaggccacgctgtggacggcaaggcgggcgagcggggcctgccg
ggctccccgggcgaggcgggccggccgggctccccggggcccgcgggcctgccgggcttc
tgcgagccggccgcgtgcctgggagcctcggcctacgcggccgcacgcctgacggagccg
ggcagtgtcaagggcccctcgttctga
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