Pyrgilauda ruficollis (rufous-necked snowfinch): 121359882
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Entry
121359882 CDS
T07608
Symbol
HDAC1
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03082
ATP-dependent chromatin remodeling
pruf03083
Polycomb repressive complex
pruf04110
Cell cycle
pruf04330
Notch signaling pathway
pruf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121359882 (HDAC1)
03083 Polycomb repressive complex
121359882 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121359882 (HDAC1)
04350 TGF-beta signaling pathway
121359882 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121359882 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121359882 (HDAC1)
Enzymes [BR:
pruf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121359882 (HDAC1)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
121359882 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
121359882 (HDAC1)
BRAF-HDAC complex
121359882 (HDAC1)
REST complex
121359882 (HDAC1)
SHIP complex
121359882 (HDAC1)
MiDAC complex
121359882 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121359882 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121359882 (HDAC1)
Chromatin remodeling factors
NuRD complex
121359882 (HDAC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Presenilin
Fer4_2
Motif
Other DBs
NCBI-GeneID:
121359882
NCBI-ProteinID:
XP_041335082
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETXGDEEEDDPEKRI
SIRNSNKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKAEEEKEEEEKKDEKEEEKAKE
EKAATATAAAAAEPKGNGENERERERERDRNTCGACGACVSPGGAGESVGTGAARGVSGG
SGGFL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccccacaggatccgcatgacccacaacctcctgctcaactatgggctctacagg
aagatggagatctatcgtcctcacaaggccaatgcagaggagatgaccaagtaccacagc
gatgattacatcaaattcctgaggtccatccgccctgacaacatgtctgagtacagcaag
cagatgcaaagatttaatgttggggaggactgccctgtgtttgatgggctctttgagttc
tgtcagctctctgctggaggctctgttgccagtgctgtgaagctgaacaagcagcagaca
gacattgcggtgaactgggcaggaggtctccaccacgccaaaaaatcagaagcttctggg
ttctgctacgtcaacgacatcgtgctggccatcctggagctcctcaagtaccaccagcga
gtgctgtacattgacatcgacatccaccacggggacggggtggaggaggctttttacacc
acagacagggtcatgaccgtgtccttccacaaatatggagaatatttcccaggaactggg
gacctgagggacatcggggcaggcaaagggaagtactacgctgtgaattacccgctgcgc
gacggcatcgatgacgagtcctacgaagccattttcaagcctgtgatctccaaggtgatg
gagacgttccagcccagcgctgttgtcctgcagtgtggctctgattccctgtctggggac
aggctgggctgcttcaacctcaccatcaaaggccatgccaagtgtgtggagtttgtgaag
agctttaacctgcccatgctgatgctgggaggaggggggtacacgatccgcaacgtggct
cgctgctggacctacgagactnncggggatgaggaggaggatgatcctgaaaaacgcatt
tccatccgaaattccaacaagagaatctcctgtgacgaggaattctccgactccgaggac
gagggggagggagggcgcaagaacgtcgccaacttcaagaaagccaaacgtgtgaaggca
gaggaggagaaggaggaagaggagaagaaagatgagaaagaagaggaaaaagcaaaagag
gaaaaagcagcaacagcaacagcagcagcagcagcagaacccaaagggaacggggagaac
gagagagaaagagaaagagagagagacagaaacacctgcggggcgtgcggggcgtgtgtc
agtccggggggtgcgggcgagtccgtggggaccggggctgctcggggggtctcggggggc
tcgggggggttcctctga
DBGET
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