Pyrgilauda ruficollis (rufous-necked snowfinch): 121360032
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Entry
121360032 CDS
T07608
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04514
Cell adhesion molecule (CAM) interaction
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121360032 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121360032 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pruf00535
]
121360032 (SDC3)
Proteoglycans [BR:
pruf00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
121360032 (SDC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
121360032
NCBI-ProteinID:
XP_041335419
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MPGEVPPPAPRGLRSLPLLLLLLLSARAALAQRWRNENYERPVDLEGSGDDDPFGEDELD
DIYSGSGSGYSEPEPGLDTAVSLTTDTLVTLPTTAAVLPVTAAQPVATPLEPSPTPQDTT
PGQATSAFLIPRTTEAPVVPSWKATTTSTTASEPPTTTTATTTTTTATTTAEATTTTTTT
TTTTATTTTTEATTTTSSTTVAMAKPTTIRRFLPPLTTKAATTRATTLETPTTPAPETST
PTEVATSRLVPTSTAKPRALPKPSTSRTAELPEKSTALPPRATTQPPTEAPQMEPGEVTT
APEKEPEVPASSGPSGDFEIREEEETTRPDLGNEVMAVVTPPAGPGPGRNVETGLMDNTI
DSGNSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPK
QANVTYQKPDKQEEFYA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggaggtgccgccgccggcgccccgggggctgcggagcctcccgctgctgcta
ctgctgctgctcagcgcccgcgccgcgctggctcagcgctggcgcaatgagaactacgag
cggcccgtggacctggagggctccggggacgacgacccctttggagaagatgagctggac
gacatctactccggctctggctcggggtattctgagccggagccggggctggacacggcc
gtgagcctgaccacggacacgctggtgacgctgcccaccacggcggccgtgctgcctgtc
accgctgcccagcccgtggcaacacccctggagccgtcccccaccccccaggacaccacc
cccgggcaggccaccagcgccttcctcatccccaggaccacagaagcaccggtggtgccc
agctggaaagccaccaccaccagcaccacggccagcgagcccccaacaaccaccacagcc
accaccaccaccaccacagccaccaccactgcagaggccaccaccaccaccaccaccacc
accaccaccacggccaccaccaccaccacggaggccaccacgaccacaagcagcaccact
gtggccatggccaagcccacaaccatccggaggttcctgcctcccttgaccaccaaggcg
gccaccacccgggccaccaccctggagacccccaccacacccgcccctgaaaccagcacg
ccgacagaggtggccacgtcacgccttgtccccaccagcacggccaagcccagggctctg
ccaaagcccagcacctcgaggactgcagagctccccgagaaaagcacggcgttgccaccc
agggccaccacgcagccgcccacagaggccccccagatggagccaggggaggtgacaaca
gcccctgaaaaggagccggaggtcccggccagcagtggccccagcggggacttcgagatc
cgggaggaggaggagacgactcgtcctgacctcgggaacgaggtgatggctgtggtgacg
ccgccggcggggccgggacccggcaggaacgtggagacagggctgatggacaacacgata
gactcgggcaactcggctgctcagctgccccaaaaaaacatcctggagaggaaagaggtg
ttgatagcggtcatcgtgggtggcgtggtgggcgcccttttcgccgccttcctggtgatg
ctgctcatctaccgcatgaagaagaaggacgagggcagctacaccctggaggagcccaag
caggccaacgtcacctaccagaagccggacaagcaggaggagttctacgcgtag
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