Pyrgilauda ruficollis (rufous-necked snowfinch): 121360083
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Entry
121360083 CDS
T07608
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121360083 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121360083 (TPR)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121360083 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
121360083
NCBI-ProteinID:
XP_041335511
LinkDB
All DBs
Position
Unknown
AA seq
2368 aa
AA seq
DB search
MAAVLQQLLERAELAKLPRAVQGKLERFLGDQQGEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQTLREELKKLHEQLKVLNEKNKDLEAAQDRNAAVQSQLIREKEEL
EAEKRDLVRTTERRSQEVEHLNEDVKRLNEKLTEANTEKAKLQLKLDELQTSDVSMKYRE
KRLEQEKELLLNQNTWLNAELKAKTDELLHTAREKGNEILELKCSLENKKEEVSRMEEQV
NSLKQSNENLQKHVEELLNKLKEAKEQQTSMEERFHNELNAHMKLSNLYKSAADDSEAKS
NELTGAVEELHKLLKEAGEANKAAQEHLAEVEESKATMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLHMEKLENRRIN
KYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIHRLQDSADQANKHAS
FFERESQRLEVRVKDLSQQICVLLMELEEARGNHVIRDEAVSSADISSSSEVITQHLVSY
RNIQELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLDEAVSELQQLRESRQHQ
LQLVESIIRQRDMFRILLTQTTGAIIPLQASGMLPEEICLTSTPKRPSLPQSMATPAPVS
MSESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRSQNAKISTQL
EFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAE
VRAENLKKEKDILKMSDVRLTQQRDSLLVEQRGQNLLLTNLRTIQGILERSETETKQRLN
NQIEKLEREISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETNRHINTKELLKNAQ
KESAMLKQQLNNTEAQLTSQSSQRPPGKGQPSTNEDMDDLVSRLRQAEEQVNDLRERLKT
SSSNVEQYRAMVLSLEESLNKEKQVTEEVRTTVEARLKESSEYQAQLEKKLMESEKEKQE
LQEEKRKAVENMEQQLSELKKSLSAVQSEVQEALQRASTALNNEQQARRDCQEQAMMASE
AQNKYERELMLHAADVEALQAIKEQVAKNAAVRQQLEEAAQKAESELLESKASWEERERM
IKDEASKLASRCEDLEKQNRLLHEQLESMSNKMVTSMKEAIPTAANVSLSEEGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREKVQVTAKTIA
QHEELMKKTETMNILIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANAKRVQQMSEETGR
LKAEVARTNASLTTSQNLVQSLKDEVTKIRTEKDTLQKELDAKVADIQEKVKTITQVKKI
GRRYKTQYEELKAQHDKMVAESSTLPLAEAQEDQVSAQEVQELKDTLSQAEVKTKNLETQ
VESLQKTITEKETEVRNLQEQIMQLQAELARFHQDLQEKTTQEEQLRQQITEKEEKTRKT
LLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDEPPESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVS
TPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSASGSVRSTSPNVQTSLPQPILTVQQQTQATAFVQPTQQSHAQIEPAAQEPAPA
IVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRSREEEEDNTVENSDQISEETVDAPTS
KKLRIMQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYAAMEDSEETSQSI
PIDLGSLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYDDEEEEDEDDD
EDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMGGAESNQRAADSQN
SGEGSTSAAESTFAHESLREQQPSSASERQGPRPPQSPRRPPHPLPPRLTIHAPPQELGP
PVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSP
QVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPL
QVAAPVTVFTESASADASEHASQSVPMVTTSTGSLSTTTEPGAGDDADEVFAEAESEGIT
SEAGLEIDSQQEEESVQPSDESDLPSTSQDPPSSSSADTSSTQPKSLRRVRLQPPTLRTG
VRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgcagcagctcctggagcgggccgagctcgccaagctgccccgcgcc
gtgcagggcaagctggagcgcttcttgggcgatcagcagggcgagatcgacgggctgcgg
gcccgccatgagcgcttcaaggtggacagcgaacaacagtactttgaagtggaaaagcga
ctggctcagagtcaggagagacttgtaaatgagacccaggaatgtcaaactctgcgggag
gagcttaaaaagcttcatgagcagctgaaggtgctcaatgagaagaacaaggacctcgag
gctgcccaggaccggaacgcggccgtgcagagccagttaattcgagagaaggaagaactg
gaagctgagaagagagacttggtccgaacaactgaaagacgatcccaggaagttgaacat
ttaaatgaggatgttaaacgcttaaatgaaaagctcacagaggcaaacacagaaaaggca
aaacttcagctgaaattggatgagcttcaaacatcagatgtttccatgaagtaccgggag
aaaaggctggagcaagagaaagagctgctgctgaaccagaacacgtggctgaatgctgag
ctgaaagccaaaacagatgaactgctccatactgccagggagaaaggcaatgaaatcctg
gagctcaaatgcagtctggagaacaaaaaggaggaggtttccagaatggaggaacaggtg
aacagcttgaaacagtccaatgaaaacctccagaagcatgttgaagaacttttgaataaa
ttgaaggaggcaaaagagcagcagacaagcatggaagagagattccacaatgaactgaat
gcccacatgaaattatccaatttgtataagagtgctgctgatgactcagaagcaaagagc
aatgagctgacaggagcagtggaagagctgcacaagctcctgaaggaagcaggtgaagct
aataaagcagcccaggagcatttggctgaggtggaggagtcaaaagccaccatggaaaag
gagctgagagagaagatcagtaagctggagaaggagctggagaatgccaatgatttactg
tcagctacaaagcgcaaaggagccatcctgtccgaggaggagctggcagccatgtctccc
actgctgcagcagtggccaaagtggtcaagcctggcatgaagttaactgagctgtacaat
gcctacgtagaaactcaggatcagttgcatatggagaagctggagaataggagaatcaat
aaatacttggatgaaatagtgcaggaagtagaagccaaagccccaatcctaaaacgtcag
cgtgaagaatttgagcgttcccaaaaagctgttgcgagtctgtctgcaaagcttgaacaa
gctatgaaggagatccatcgcctgcaggacagcgctgaccaagccaacaaacacgcctcc
ttctttgagagggagagccagagactggaagtgcgagtgaaggatctctcccagcagatc
tgtgtgctgttaatggaactggaagaagccagaggcaaccatgtgatccgtgatgaagca
gtgagctctgctgacatcagcagctcttctgaagtgatcactcaacacctggtctcctac
agaaatatccaagagcttcagcagcagaatcagcgtctcctggtggctcttcgggagctg
ggggaggcaagagaaaaagaggagcaagaaacaacatcatctaagatctctgagctgcag
agccagctggatgaggctgtcagtgagctgcagcagctgcgggagtcgcggcagcaccag
ctgcagctcgtggagtccatcatccgccagcgggacatgttccgcatcctgctcacccag
accacgggggccatcattcctctgcaagcttcaggtatgttaccagaggagatctgtctt
acatctactccaaagcgcccgagtttacctcagtccatggcaactcctgctccagtgtcc
atgagtgagtctgtggagactgtggaggccaaggctgctcttaaacagttgcaggaagtt
tttgagaactataaaaaagaaaaggcagagaacgacaagcttctgaatgaacagaatgaa
aagcttcaggagcaggtcacagacttgaggtcacaaaatgccaagatatccacacagctg
gaatttgcctccaaacggtacgagatgctgcaggataatgtggaaggctatcgccgggaa
atcacctcgctgcacgagagaacccagaagctcacagctaccactcagaagcaggagcag
atcattaacaccatgactcaggacctgaggggagctaatgaaaaactggcagtggcagag
gtgagagcagaaaacttgaaaaaagagaaggatatcctgaagatgtcagatgtgcgcctg
actcagcaacgtgactctctgctggttgaacaaagaggacagaacttgctgctcaccaat
ctgagaacaattcagggaatactcgagagatctgagacagaaacaaagcagagactcaat
aatcagatagagaagcttgaacgtgagatatctcagctgaagaagaaactggaaagtgag
gtggaacaaagacattcccttaccaagaatcaagaggttcatatcctggacctgaagagg
cagctggagacagagaccaaccgtcacatcaacacaaaggagctcctgaagaacgcccag
aaggaaagtgccatgctgaaacagcagctgaacaacactgaggcccagctcacatcccag
tcctcacaaaggcctccagggaaaggtcagcctagtacaaatgaagatatggatgatctt
gtaagtcgtctgagacaagctgaggagcaagtcaatgacctgagagagaggctcaagact
agttccagcaatgtggagcagtacagggccatggtccttagcctggaggaatccctcaat
aaggaaaaacaagtgacagaggaagttcgtacaacagttgaagctcgtctgaaggagtct
tcagaatatcaggcacagctggaaaagaagttgatggagtcagaaaaagaaaaacaagaa
ctgcaggaggagaagcgtaaagctgtggagaacatggagcagcagctttcagaactgaag
aagagtctgtcagctgtgcagtcagaagttcaggaagctcttcagagagccagcacagct
ctgaataatgaacagcaggccaggagggactgccaggaacaagcaatgatggcttctgaa
gctcagaacaaatatgagcgggagttgatgcttcatgctgctgatgtggaggcactgcag
gccatcaaagagcaagtcgccaagaacgcagcagtgaggcagcagctggaggaggctgct
cagaaagcagagtctgagctcttggaatccaaagcctcctgggaagagagagagagaatg
atcaaggatgaagcttcaaaacttgcatcccgctgtgaggatctggagaaacaaaatcga
ttattacatgagcagctggagagcatgagcaataagatggtgacttccatgaaagaagcc
atcccaactgcagcaaatgtttctcttagtgaggaaggcaaatcccaggaacaaatcttg
gaaattcttaggtttatccgtcgggagaaggagattgcggagacgaggttcgaggtggcg
caggtggagagcctgcgctaccgccagagagtggagcacctggagagggagctccaggag
ctgcaggacagcctcaacgctgagagggagaaggtgcaggtaacagcaaaaaccattgca
cagcatgaagaattaatgaagaaaactgagaccatgaacatactcatagaaaccaacaag
atgttaagggaagagaaggagaggctggagcaagagctacagcagatacaagcaaaggta
cgcaagctcgaggcagacatcctgcccctgcaagagtcgaatgctgagctcagtgagaag
agtgggatgctgcaggcagagaagaagctcttggaagaggatgttaaacgctggaaagcc
cggactcagcacttactgagccagcagaaggacaccgatcttgaagagtatcgaaagctg
ctctctgagaaggaggcaaatgccaagcgtgtccaacagatgagtgaagaaacaggcagg
cttaaagcagaagttgccagaactaatgcatccttgactactagccagaatcttgttcag
agcctgaaggatgaagtaactaaaataagaacagaaaaggacactttgcagaaagaactg
gatgctaaagtggctgacatacaggaaaaagtgaaaactataacacaggtcaagaaaatc
ggtcgcaggtacaagacccagtatgaggagctgaaagcacagcatgataagatggttgct
gaatcgtcaactctgcctttggcagaagcacaggaagaccaagtttctgcccaggaagta
caagagctaaaagacactctcagtcaagctgaagtgaagacaaagaatttggagactcag
gttgaaagcttacaaaagacaataacagaaaaggaaactgaagttagaaatctccaggag
cagataatgcagctacaggcagaactggcccgtttccatcaagatctgcaagagaagact
acacaggaagaacagctcaggcagcagatcacagagaaggaggagaaaacgaggaagacc
ttgcttgcagccaagcagaaaattgcacagttagctggtacaaaagagcagctgacaaag
gaaaatgaggagtggaagcagaagagcagctccctggaggagcagaagacagagctggag
gtgcggatgagcgccctgaagtcccagtacgaggggcggatctgccgcctggagagggag
ctccgggagcagcaggagcggcaccacgagcagagggatgagcccccagagtccacaaac
aaggtcccagaacagcagaggcaaatctcactcaagtctactccagcttcaggtgaaaga
ggaattgccagtacttcagatcccccaacagcaaacattaaaccaactcctgttgtgtca
actcccagtaaagtgactgctgctgcaatggctgggaataagtctactccaagagccagc
atccgtcccatggtgactcctgccacagtcaccaatcccaccactacccccacagccaca
gttatgccaacaacacaggtggagactcaggaagccatgcagtcggaaggacccgtggag
catgtgccagtgtttgggagtgccagtggctccgtgcgctccaccagccccaacgtgcag
acatccctgccccagcccatcctgactgtgcagcagcagacacaggccactgccttcgtg
cagcccacccagcaaagccacgctcagatcgagcctgcagctcaggagccagcccctgcc
atcgtggaggtggtgcagagctcccagatagagaggccctccacctccacagccgtgttt
ggcacagtttcagctacccccagttcctcactgtctaaacgctcccgagaggaagaggag
gacaacactgtggagaattcagaccagatctctgaggaaacagtggatgcacctacttca
aagaaactgagaatcatgcagagagttgggcctgaggaggaagtgacagcagaagagagc
acggatggagaggtggaggcacagacatacaatcaagactcacaagactccattggagaa
ggtgtgacacagggggagtacgcggccatggaggacagcgaggagacttcccagtccatc
ccaatagatctgggatcccttcagtcagaccaacaaaacacttcctcatctcaggatggc
cagtccaagagagatgatgtgattgtaattgatagtgatgatgaagatgacgatgatgaa
gaaaatgaaggggagcaggaagattatgatgatgaggaagaggaagatgaggatgatgat
gaagacacaggaatgggagatgaaggtgatgacagcaacgaaggaactggtagtgctgat
ggcaatgatggatatgaagcagatgatgctgagggtgctgatggtacagatcctgggaca
gagactgaagagagcatgggaggagctgaaagcaaccagagggcagcagattcccaaaac
agtggagaagggagcacgagtgctgcagagtccacgtttgcccatgagagcctgagggag
cagcagccgtcatcggcgtccgagcgccagggcccgcggccgccgcagtccccaaggagg
ccaccgcaccctctgcccccacggctcaccatccacgcccctccccaggagctggggccc
ccagtgcagagaatccagatgactcggagacagtcggtggggagagggcttcagctgacc
cctgggataggtggaatgcagcagcacttctttgatgatgaggacagaacagttccaagc
acaccaactcttgtagttccacatcgtacagatggatttgcagaagccattcattccccc
caggtagctggagttcctcggttcagatttgggccccctgaagatatgccacaaaccagc
tccagtcactctgatcttgggcagctggcatcacaaggaggtttagggatgtatgaaacc
ccactattccttgcccacgaggaggaatcagggggtcgtagtgtccccacaacaccgtta
caagtggcagcaccggtgacggtgttcacggagagcgcctcagccgacgcctcggagcac
gcgtcgcagtctgtgcccatggtcaccacctccaccggcagcctgtccaccaccaccgag
cccggcgccggcgacgacgccgacgaggtcttcgcagaggcagagtctgaaggcattact
tcagaagcaggcctagaaatcgatagccagcaagaagaagaatctgttcaaccatctgat
gagtcagatcttccttcaactagtcaggatcctccttccagttcatctgcagacacgagc
agcactcagcccaagtccctgcgccgtgtccggctgcagcccccgacgctgaggacgggc
gtgcgcggccggcagttcaacaggcagaggggtgtaactcatgccatgggaggcagagga
ggcctgaacagagggaacattagttaa
DBGET
integrated database retrieval system
