Pyrgilauda ruficollis (rufous-necked snowfinch): 121360160
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Entry
121360160 CDS
T07608
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04120
Ubiquitin mediated proteolysis
pruf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121360160 (SYVN1)
04120 Ubiquitin mediated proteolysis
121360160 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121360160 (SYVN1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121360160 (SYVN1)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121360160 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
zf_RING_Vps8_fungal
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
121360160
NCBI-ProteinID:
XP_041335625
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQNENPWDNKAVFMLYTELFTGLIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPPQPPPEPPAAAAAAAQPPNFA
QGMLPPFPPGMFPFWPPVGPFPPGPAAAQAPPGTEAAAAGAAPGELNRPQGCPLCRGFGI
GDLGDPRIEDSGIRGFGDLGIWGSGIWGPQAEPSPGVPPMPVPPAGFAGLTEDELRAMEG
HERQHLEARLQCLHNIHTLLDAAMLQINQYLGVLASLGYWDGLGRSPRHRDPREPPEAAV
KPAPAEDEEEAAEGSEPREGPDTAELRRRRLQRLGTPPH
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacggcgctggtcatggccggcagcctggcgctcaccacggccgtggtggcc
cacgcctactacctgaagcaccagttctaccccaccgtggtgtacctcaccaagtccagc
cccagcatggccgtgttgtacatccaggcttttgtgctggtgttcctgctgggcaagttc
atgggcaaggttttcttcgggcagctgcgcgcggccgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagc
ccgcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgtgtggattttatggagaggagccccaacatctcgtggctcttccacttccga
atcgtctccctgatgttcctgctgggaatcctggacttcctcttcgtcagccacgcctac
cacagcatcctgacccgcggcgcctccgtccagctggtcttcggcttcgagtacgccatc
ctgatgaccatggtgctgaccatcttcatcaagtacgtgctgcactccgtcgacctgcag
aacgagaacccctgggacaacaaggccgtgttcatgctctacaccgagctcttcaccggg
ctgatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccgctcttcgccatccgccccatgtacctggccatgaggcagttcaagaaggccgtcacc
gacgccatcatgtcccgccgggccatccgcaacatgaacacgctgtaccccgacgccacg
gccgaggagctgcaggccatggacaacgtgtgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcgtggttc
cagcggcagcagacgtgccccacgtgccgcatggacgtgctccgcgcctcgctgcccccg
cagccgccccccgagcccccggcagcggcagcggcagcggcgcagccccccaactttgcg
caggggatgctccctcccttcccgccggggatgttcccgttctggccgcccgtggggccc
ttcccgcccggccccgccgctgcccaggccccgcccggcaccgaggccgcggccgcgggg
gccgctcccggtgagctgaaccgtccccaggggtgtcccctatgccggggatttgggatt
ggggatttgggggatcccaggattgaggattcggggattcggggatttggggatttgggg
atttgggggtctggtatctggggaccccaggctgagccgtccccaggggtgccccccatg
cccgtgccccccgccggcttcgcggggctgacggaggacgagctgcgggccatggagggc
cacgagcggcagcacctggaggcgcggctgcagtgcctgcacaacatccacacgctgctg
gacgccgccatgctgcagatcaaccagtacctgggcgtgctggcctccctcgggtactgg
gatggactggggaggagcccccggcaccgggaccctcgggagcccccggaggcagcggtg
aagccggccccggccgaggatgaggaggaggcggccgaaggctccgagccccgcgagggc
cccgacacggccgagctgcggcggcggcgcctgcagaggctggggacccctccccactga
DBGET
integrated database retrieval system
