Pyrgilauda ruficollis (rufous-necked snowfinch): 121360602
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Entry
121360602 CDS
T07608
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04270
Vascular smooth muscle contraction
pruf04625
C-type lectin receptor signaling pathway
pruf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121360602 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121360602 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
121360602 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121360602 (ARHGEF12)
Membrane trafficking [BR:
pruf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121360602 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
121360602
NCBI-ProteinID:
XP_041336499
LinkDB
All DBs
Position
Unknown
AA seq
1481 aa
AA seq
DB search
MSGTQSTITDRFPLKKPSRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDLAAFGHMSPIMASPHSP
GTSGNAERITSPVLMGDGVLSSRSVSESLQISEGEAESGDSGSKLDFSGDSPSRPNSDIA
DSPRSGLKERIYPDESPEKAELQDTDSQSSVGSPLARVGTQIIGAEDDDFDTEQEQINGQ
CSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVFLEFYQF
FLDRAANLKVPVPEEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLEDFRQKRS
MGLTLAEGELSRLDAERLRDRNAVEKERSCAEQILAKIEEVLMTSQPLEEDKSSTMQYVI
LTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILGPPRRPS
RHDSSAIGRAMEMQKPRHPKHSPTASSVSPEPPESSKMRQSGSSSDGTDAPYPPANAMSP
LAMGPFASPEGSKDSDTGVKQPGEAPPASDSMDGTPRTPNNTFEFPSPLENLQEEEGESE
RMVDMGTPKPFRKTDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKPYEIKRQ
EVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSDKRKIFSNLEDILGLHVALNDQM
KSVRKRNETSVIGQIGEDLLSWFSGPAEEKLKLATATFCSNQPFALEVIKSRQKKDSRFQ
TFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKAADHCRQ
ILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHEGPLTWK
VNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLNTVLVRQ
VATDNKAFFVISMSATGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVIPLPQSG
PGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNPQSSSPIMSEKAKVEGLLG
AEGQFEKVQQAELALKDSSACFEHPASSSASMPEGQWARDALRNLGLLKQLLVQQLGLAE
KGTLEDRQRLPRFRSVSQEAQTESGNELQPSESKFQQPGEDRALGRTGEAAGGHGARTAA
ECPASGDAMQLVGTEPPARGTLPMDSMNLEGSSSELEGLGAEESGEHFFDAREAHSDENP
GESELLDRKEEEEEEEEEEEEEEVQIRISGNYLILDGYGTVQESSTDEEVSALVLQCTSH
RQPALDCPQQQQQCPLSPRDTQSDGGSSPFPEELRWAGLEEPCPFLGSPQLPLEIRVQLM
QYIHNIQDALEKLKEVEEDYSVLRRQGLAGSASTGEHSDKS
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaaccttcgagacac
ggcagcattctgagcagagagtctccagcagacaagaagcagaaggttgaacgctgcagc
agcacccacgacttcgatcccacagatagctcctccaagaagacaaagtctagttctgag
gagagtagatccgagacgtatggcctggtgcagaggtgtgtggtgatccagcgggatgag
aacggcttcgggctgacggtcagcggggacaaccccgtcttcgtgcagtctgtcaaggaa
gatggagcagccatgcgggctggagtgcagacaggtgatagaattatcaaggtgaacggg
actctggtaacacactcgaaccatttggaggtggtcaagctgatcaagtctggttcctat
gtagctctcactgtccaggggcgccctccagggtcgccccagattcccttggctgattct
gacgtggatctggcagcttttgggcatatgtctcccatcatggcatccccccactcgcct
ggcacgtcagggaatgcagaaaggatcaccagcccagtgctcatgggggatggagtcctg
tcctccaggtctgtgtcagagtcgctgcagatcagcgagggggaggcagagagtggggac
agtggcagcaaactggatttcagtggtgacagcccctccagacccaacagtgacattgct
gatagccctcgcagtggcctgaaggagaggatttatccagatgagagcccagaaaaggct
gagcttcaagatactgactcccagtccagtgttggaagtcccctggcccgagtggggact
cagatcattggagcagaggatgatgattttgacacggagcaggagcagatcaacgggcag
tgcagctgcttccagaacatcgagctcctgaaatcccgcccggctcacctggctgtcctc
ctgcaccacgtggtgtcccagtttgatcctgcagcactgctgtgctacctttacacagac
ctgtacaaacagaccaactccaaagagacccggcgtgttttcctggagttttaccagttt
ttcctggacagagctgcaaacctgaaagtcccagttccagaggaaatctccttggaatta
gacaggagaaggccagagctcctccctgaagagctgcaccgccagttcatccaaaccatg
caggataaagtctgcccagaggttcagaggaacctggaagatttcaggcagaagaggagc
atggggctcaccctggccgagggggagctgagcaggctggacgcagagcggctccgcgac
cgcaacgccgtggagaaggagaggagctgtgcagagcagatcctggccaaaatcgaggag
gtcctgatgacatctcagcctctggaagaagacaagagctccacgatgcaatatgtgatc
ctcacctacatgaaacacctgggagtgaaagtcaaagagcctcggaacctggagcagaag
cggggccgcattggtttcctgccaaagatcaagcaaagcatcaagaaagagaaagaagga
gaggagaaagggaagaggagaggcttccccaacattctgggccccccgaggagaccgagc
cgacacgacagcagtgcaattggcagggccatggagatgcagaagcccaggcaccccaag
cactcacccacagcctcttctgtgagcccagagccccccgagtccagcaagatgcgccag
agcggctcctccagcgatggcacagatgccccttacccccctgccaacgccatgtccccc
ctggccatggggccctttgcctctccagagggcagcaaggacagtgacacaggtgtgaag
cagcctggggaagccccacctgccagtgactccatggatggcaccccacgtacacccaac
aacacctttgagttcccatctcctttggaaaacctgcaggaggaggagggagagtctgag
aggatggttgacatgggaacaccgaagccttttcgcaagacggacagtgttggctttgca
gatgtgcagagtgaggatgagctctatgacttcgacatggacatggaccctcccaactgg
cagcagcttgtgagcagggaggtgctgatggggctcaaaccctacgaaatcaaacgtcag
gaggtgataaatgagctgttctacacggagcgagcccacgtgcgcacgctgaaggtcctg
cacaacgtcttctaccagagggtcaccagggagggcatcctcagctccagtgacaagcgg
aaaatcttctccaacctggaggacatccttgggctgcatgttgcactgaacgatcagatg
aaatctgtccgaaaaaggaacgagacttctgtcattggccaaattggggaagatttgctc
tcctggtttagtggaccagcagaggagaagctgaaacttgccactgccaccttctgcagc
aaccagccctttgcccttgaggtcatcaagtcccgccagaagaaggactcgcgcttccag
accttcgtgcaggatgctgagagcaatcccctgtgccggcggctgcagctgaaggatatc
atccccacggagatgcagaggttgactaaatacccccttctgctggataacattgctaaa
tacacagagctgcctgaggagaaggagaaagtcaagaaagcagcagatcactgccgccag
atcctcaaccacgtgaaccaggctgtcaaagagtcagagaacaagcagcacctggaggat
tatcagcggcgactcgacctctcctacttgaagcagtcagaggatcccatgatggatgag
ttcaggaacctggatctaacaaagagaaagatgctccatgaagggcccttgacctggaag
gtgaatcgtgacaaaaccatcgatctgtacactctgctgctggaggacatcctggtgctg
ctgcagaaacaagatgacaaactggtgctgaagtgccacagcaagatcctggcatccaca
gctgacagcaaacacaccttcagccccatcatcaaactcaacactgtgctggttcgccag
gtggccacagataacaaagctttcttcgtcatctccatgtcggcgacgggggctcacatc
tacgagctggtggcacagactgtctcagagaagaatgtctggcaggaccttatagctcag
atggcaggaactgtgaagatggggagcagcagaagggtgatcccactgcctcagtcaggc
cctggcgaagaggagcgtgaggaagaggagcagcagaagctgaaagagcagcatgacatt
cctgccagcagcctgcaaagtccagataaagatttgggcctggagtctcccttaatactg
aaccctcagtcctcttcacccatcatgtctgagaaggccaaggtggaagggctgctgggg
gctgaggggcagtttgagaaggtgcagcaggcagagctggcactgaaggactcctctgcc
tgctttgaacacccagccagcagctcagcctcaatgccagaggggcagtgggcacgggat
gccctgaggaacttggggctgctgaagcagctcttggtgcagcagctgggcctggcagag
aagggcaccctggaggacagacagcgcttgcccaggttcaggagcgtgtcccaagaagcc
cagacagagagtggcaacgagctgcagccctctgagagcaaattccagcagcctggagag
gacagagcccttggcagaactggagaggccgcgggcgggcacggcgcccggactgcagcc
gagtgcccggcctcaggggatgccatgcagctggtgggcacggagccccccgccaggggc
actttgcccatggacagcatgaacctggagggctccagctcggagctggaggggctgggg
gctgaggagagcggggagcatttcttcgatgcccgggaagctcacagcgacgagaacccc
ggcgagagcgagctgctggacaggaaggaggaagaggaggaggaggaggaggaagaggag
gaggaggaggtgcaaattcggatctcaggaaattatttgatccttgatggatacggaaca
gtgcaggagagctccacggacgaggaggtgtcagccctggtcctgcagtgcacctcccac
aggcagcccgccctggactgtccccagcagcagcagcagtgtcccctgtccccaagggac
acccagtcggacgggggcagctcgcccttccccgaggagctgcgctgggcagggctggag
gagccctgtcccttcctgggcagcccccagctccctctggagatccgagtgcagctcatg
cagtacatccacaacatccaggatgccctggagaagctaaaggaggtggaggaggattac
agcgttctgcggcgccaggggctggctggctcagcctccacaggagagcactcagacaaa
agctag
DBGET
integrated database retrieval system
