Pyrgilauda ruficollis (rufous-necked snowfinch): 121360818
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Entry
121360818 CDS
T07608
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf00100
Steroid biosynthesis
pruf01100
Metabolic pathways
Module
pruf_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121360818 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pruf01006
]
121360818 (FDFT1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
121360818 (FDFT1)
Prenyltransferases [BR:
pruf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121360818 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
121360818
NCBI-ProteinID:
XP_041336851
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MGAGSRAVSVLRRTLTLSPPRKPPRAAGRRRGQQQQQQQRCGAPAAPPAPPPAAPRLRTA
APLCPQDSLGCGLRTCYRYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMS
IPLDVKVPMLHEFHSHLYQPDWKYTESKEKDRQVLEDFPTISMEFRNLSKVYQDVISDIC
HKMGVGMAEFLEKKVDSQREWDKYCHYVAGLVGIGLSRLFSASELEDSIVGQDTDLANSM
GLFLQKTNIIRDYLEDQLEGREFWPREVWSRYAKKLSDLAKPENIDVAVQCLNELITNAL
HHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNQQVFRGVVKIRKGQAVTLMMD
ATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKTQQVIASIRAISLPGSPMASRHHYSPIYL
SCAMLLAALSWQYLSTLSKATEEYVQAGDN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggagccggctcccgcgccgtgtccgtgctgcggcggacactgaccctgtccccgccg
cggaagcccccgcgggcagcgggccggcggcggggacagcagcagcagcagcagcagcgc
tgcggagcccccgcggcgcccccggccccgccgcccgccgccccccgcctccgaaccgcg
gccccgctctgcccgcaggactcgctgggatgcggcctccgcacctgctaccggtacctc
aaccagaccagccgcagcttcgccgccgtcatccaggctctggatggagagctgcgacat
gcagtgtgtatattctacctagttctccgtgccctggacactgtagaggatgacatgagc
atccccttggatgtcaaggtcccgatgctgcacgagttccactcccacctctaccagcca
gactggaagtacacagagagcaaggagaaggacaggcaggtgctggaagacttcccaacg
atctccatggagttcagaaacctgtccaaggtctaccaggatgtgatttctgatatttgt
cacaagatgggggttgggatggcagagttcttggagaagaaggtggattctcagcgtgag
tgggacaagtattgtcactacgttgctgggctggtggggattggcctttcccgtctcttc
tctgcatcagagctggaagattccatcgtggggcaggacacagacctggcaaactccatg
ggcctcttcctgcagaaaaccaacatcatccgtgactatctggaggaccagctggaggga
agggagttctggcccagagaggtttggagcagatatgccaagaagctctcagaccttgcc
aagccagagaacatcgacgtggccgtgcagtgcctcaacgagctcatcaccaacgccctc
caccacgtccccgacgtcctcacctacctgtcccgcctcaaaaaccaaagtgtcttcaac
ttctgcgctatcccccaggtgatggccattgccacgctggctgcctgctacaacaaccag
caggtgttcaggggggtggtgaagatccgcaagggccaggccgtcaccctcatgatggat
gccacgaacatccaagctgtcaaagccatcatgtaccagtacgtagaagagatctaccag
aagatcccgagcacggacccctcgtccaacaagacgcagcaggtcatcgcctccatccgc
gccatcagcctgcccggcagccccatggcctcccgccaccactactcccccatctacctg
tcctgtgccatgctgctggcagccctgagctggcagtacctcagcaccctctccaaggcc
accgaggagtacgtgcaggcaggagacaactga
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