Pyrgilauda ruficollis (rufous-necked snowfinch): 121360935
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Entry
121360935 CDS
T07608
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121360935 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121360935 (RAG1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121360935 (RAG1)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121360935 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121360935
NCBI-ProteinID:
XP_041337054
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MDLPEELQHTYTKFSEWKFKLFKLRSFEKTPSDDSQHIQKDQAEEAVSSNKEIILHEDEA
VPREEEMELMDNRQGLEEDAHATKTQENRAHQNNLKQLCRICGVSFKTDCSKRTYPVHGP
VDDETLWLLRKKEKTATSWPDLIAKVFKIDVRGDVDTIHPTRFCHNCWSIIHRKFSNTLC
EVYFPRNSTMEWQPHSPNCDVCHTARRGVKRKSQPPHVQRGKRVKTTGKHAQLNRGVKNQ
QLKQAQINNKNLMKEIVNCKDIHLSTKLLAVDYPVDFIKSISCQICDHILADPVETTCRH
LFCRTCILKCIRVMGSYCPSCWYPCFPTDLVTPVKSFLNILDNLSIRCPVKECDEEISHG
KYGQHLSGHKEMKEGELYSYINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEEGG
DIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRINTFLSCSQYHKMY
RTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLPLSI
DDYPVDTIAKRFRYDAALVCALKDMEEEILEGMKEKNLDDYLNGPFTVVVKESCDGMGDV
SEKHGSGPAVPEKAVRFSFTVMNISIAHGNESKRIFEEVKPNSELCCKPLCLMLADESDH
ETLTAILSPLIAEREAMKNSELLLEMGGILRTFRFVFRGTGYDEKLLREVEGLEASGSTY
ICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKPFI
ETVPSIDALHCDIGNATEFYRIFQMEIGELYKNPDVSKEERKRWQLTLDKHLRKKMNLKP
MLKMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPAKECPEL
LCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNESGN
KLFRRFRKMNARQSKVYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQNFTIDSGGSLSDS
LTQEVLENNDSAEL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggatctacctgaagaacttcagcatacatatacaaaattttctgaatggaaatttaag
ctctttaaattgcgatcatttgaaaaaacaccctctgatgacagccagcacatacagaaa
gatcaggcagaagaggctgtttcttcaaacaaagaaatcatcctgcatgaagatgaagca
gtgccaagagaggaagagatggagttaatggacaataggcagggacttgaggaagatgcc
catgccacgaaaacacaagaaaatagagctcatcagaacaatctgaagcaactctgccgc
atctgtggggtttcatttaaaacagattgttccaagagaacctacccagtgcatgggcca
gtggatgatgaaactctttggcttctgagaaagaaagaaaaaacagcaacctcttggcca
gatcttattgctaaggttttcaagattgatgtgcgaggggatgtcgacactatccatccc
actcgattttgtcacaactgttggagtattatacatagaaaattcagtaatactctatgt
gaagtgtattttcctaggaacagcacaatggagtggcaaccccattccccaaactgtgat
gtctgccatactgccagacgaggagtcaagagaaaaagccagcccccacatgtgcaacgt
ggcaaacgtgtcaaaaccactgggaaacatgctcagctaaacagaggtgtaaagaaccaa
caactcaaacaagcacagataaacaacaaaaatttaatgaaagagattgtcaattgcaag
gatatacatctcagcaccaagctgcttgcagttgattacccagtagacttcattaaatcc
atttcttgccagatttgtgatcatattttggcagatccagtggaaacaacatgcagacac
ttgttttgcagaacttgcattcttaaatgtatcagggttatgggcagctattgcccctcc
tgttggtatccttgctttcctactgatctggtaaccccagtgaaatccttcctgaacatc
cttgataatctgagtataagatgccctgtaaaggaatgtgatgaagaaatctcgcatgga
aaatatggccaacacctctctggccacaaggagatgaaagaaggagagctctatagctac
atcaataaaggtggccgaccgaggcagcacctcctgtctttgacaaggagagctcagaaa
catcgtctgagggaactgaaacgtcaagtcaaggcttttgccgagaaagaagagggtggt
gatataaaggctgtatgtatgactttgttcctgctagctttgagagcaaaaaatgaacac
aaacaagcagatgaactggaggctataatgcaagggaggggatctggacttcatcctgct
gtctgtctggccatccgaatcaacacatttctcagctgtagtcagtatcataaaatgtac
agaacggtaaaagccgtcactggaaggcagatcttccagcctttgcatgctcttcgcact
gctgaaaaagccctcctaccaggttatcacccatttgagtggaaacctcccctaaaaaat
gtatccactaacacagaagtgggaattatagatggactatcaggactgccactctcaatt
gatgattaccccgtagacacaattgcaaagagattccgatacgatgcagccttggtctgt
gccttaaaggacatggaagaggagatcttggaaggcatgaaagaaaaaaacctggacgac
tatttgaatggccccttcactgtggtagtaaaagagtcctgtgatggaatgggagatgtc
agtgagaagcatggaagtgggccggctgtcccagagaaggctgttcgcttttccttcaca
gtcatgaacatttctatagcacatgggaatgaaagcaagaggatctttgaggaagtaaag
ccgaattcagagttgtgctgtaagcccttgtgccttatgctggctgatgaatcagatcat
gaaactctgacagcaatcctgagccccctcatagcagaaagagaggctatgaaaaacagt
gaactgctgcttgaaatgggaggcatcctgagaacatttaggtttgtctttaggggtaca
ggatatgatgagaaactcctgcgggaagtggaagggctggaggcctcaggttccacttat
atttgtaccctgtgtgatgcaactcgcttggaggcatcccagaatctggtcttccactcc
ataaccaggagccatgctgaaaatctggagcgatatgaaatatggaggtccaacccgtat
cacgagtctgttgatgagctccgtgacagagtgaagggtgtttcagccaaaccttttatt
gagactgttccctccatagatgcattgcactgtgacattggcaatgcaacagaattctac
aggattttccagatggagattggtgaactttacaagaatcctgatgtgtctaaagaggag
aggaagaggtggcagttgactcttgacaaacacctcagaaaaaagatgaacttgaagcct
atgctgaagatgagtggaaattttgctagaaagctcatgtccaaagagactgtagaggca
gtatgtgaattaattaagtgtgaggaaaggcatgaagctctaaaagaactaatggacctt
tatctgaagatgaagccagtgtggcgatcctcatgcccggccaaggagtgcccagaactg
ctgtgccagtatagctacaattcacagcgttttgcagagctcttatctacaaagttcaag
tacagatatgagggcaagattacaaattatttccacaaaacacttgctcatgttcctgaa
atcattgaaagagatgggtccattggggcctgggcaagtgaaggaaatgagtctggaaac
aaactgtttaggaggttccgaaaaatgaatgccaggcagtccaaggtctatgagatggag
gatgtcttgaagcaccactggctatatacctccaagtacctccagaagttcatgaatgct
cataaaacattaaaaagccagaacttcaccattgattcagggggtagtttaagtgactcc
ttgacacaggaggtcttggaaaacaatgattcagcagaactctaa
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