Pyrgilauda ruficollis (rufous-necked snowfinch): 121360939
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Entry
121360939 CDS
T07608
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04150
mTOR signaling pathway
pruf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121360939 (LRP5)
04150 mTOR signaling pathway
121360939 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121360939 (LRP5)
Membrane trafficking [BR:
pruf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121360939 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
121360939
NCBI-ProteinID:
XP_041337060
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MEAAAAAPLPLLLLLRLLAASVLRCEPGSAGASPFLLFANRRDVRLVDAGGTKLESTVVV
SGLEDAAAVDFQYSQGIVFWTDVSEEAIKQTYINQTGNVVQNVIISGLVSPDGLACDWIG
KKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERA
GMDSSMRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTH
PFALTLSGDTLYWTDWQTRSIHACNKRTGEKRREILSALYSPMDIQVLSPDRQPYFHTPC
EENNGGCSHLCLLSPRDPFFSCACPTGVQLEDDGRTCKAGAEEVLLLARRTDLRRISLDM
PDFTDIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGTGAQTLVTTEINHPD
GIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWG
ESPKIECAYLDGSERRVLVNTSLGWPNGLALDLEKNKLYWGDAKTDKIEVINVDGTMRKT
LLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKIKASRDIIIDQLPDLMGLKATSVTKA
FGTNSCAENNGGCSHLCFFTPQEARCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRIS
LETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDY
PEGMAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTE
WGGKPRIVRAYMDGTNSITLVDKVGRANDLTIDYVDQRLYWTDLDTSMIESSNMLGQERE
IIADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTSGKNRTLIQGHLDFVMDILVFHSSR
QDGLNDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSSPASFLLFSQKSAISRM
IPDDQQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGTQPFTVMSTPN
QSQNPEKQPHDLSIDIYSHTLYWTCEATNSVNVHRLNGESIGMVLRGDHDRPRAIVVNAE
RGYMYFTNMQERAPKIERAALDGTEREVLFTTGLIRPVALVVDNKLGKLFWVDADLKRIE
SCDLSGANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKVNGYKRTRIQGRIAH
LTGIHAVEELDMEEFSVHPCSRDNGGCSHICIAKGDGTPRCSCPEHLVLLQNLLTCGEPP
TCSPDQFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSASQFQCEKGQCIDAHLRC
NGEIDCQDKSDEADCDTICLPNQFRCASGQCILLKQQCDSFPDCIDGSDELMCEKSKPAS
DESQPHSSAIGPVIGIILSLFVMGGMYFVCQRVVCQRYAGPNSPFPHEYVSGTPHVPLNF
IAPGSSQHGTFTGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQI
LNPPPSPATDRSLYNAEMFYSSNIPSNTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSRW
KANKYYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcggccgcgccgctcccgctgctgctgctgctgcggctcctcgccgcc
tcggtgctgcgctgcgagccgggctcggccggggcgtctccctttctgctgtttgccaac
cggcgggatgtgcggctggtggatgctggaggcacgaagctggagtccacggtggtggtc
agtggtttagaggatgctgctgcggttgacttccagtactcacaaggcatcgttttctgg
acagatgtgagtgaagaagccatcaagcaaacttacattaaccaaactgggaatgtggtg
cagaatgtcatcatttctggtctggtttccccggacggcctggcgtgtgattggattggg
aaaaaactttactggacggattcagaaaccaataggatagaagtagctaatctcaatgga
acatctagaaaagtcctcttctggcaagaccttgatcagcccagggcaatagctttggat
ccggctcatggatacatgtactggactgactggggtgaaaccccccgaatagaacgggca
ggaatggacagcagcatgcggaagataattgttgattctgacatttactggccaaatgga
ctcacgatagatctcgacgaacagaaactttactgggctgatgccaaactgagtttcatt
catagggcaaatctggatggttcctttaggcaaaaggttgttgaaggtagccttactcat
ccctttgccctgacgttgtctggggacacgctgtactggacggactggcagacgcgctcc
atccacgcctgcaacaaaaggacgggagagaagaggagggagatcctgtctgccctctac
tcgcccatggacatccaggtcctgagccccgaccggcagccctactttcacactccatgt
gaggaaaacaacggtggttgctcccatctgtgcctgctgtctccaagggaccccttcttc
agctgtgcctgtcccactggtgtgcagctggaagacgatggcaggacgtgcaaagcaggt
gctgaggaagtcctgctgctcgccagaagaactgacttgaggaggatttccctggacatg
ccggatttcactgacattattctgcagatagacaacatcagacacgcgatcgccatcgac
tatgaccctgtggaaggctacatctactggactgatgatgatgtccgggccattcgtcgg
gcctatctcgatggcactggagcccagactctggtgaccacggagatcaaccatccagat
gggattgctgtggactgggtggccaggaacctctactggactgacactggtacagaccgc
atcgaagtgacgcggctgaacgggacgtcgaggaagattcttatctcagaaaacctagat
gaacctcgagccatagtgctcaatcctgtaatgggctacatgtattggacagactggggt
gaaagtccaaagatagaatgtgcttatttggatggctcagaaaggcgagttctggtgaat
acttctcttgggtggcctaatggcttggcactggatcttgagaaaaacaagctttactgg
ggagatgcaaaaacagataaaatagaggtcataaatgttgatggaacaatgaggaaaacc
ctcttagaagacaagcttccacacatatttgggttcacactgctgggagactacatctac
tggactgactggcagagacgaagcattgaaagagtgcacaagataaaggccagcagagac
atcattattgatcagctgccagatttaatgggccttaaggcaacgagtgtcaccaaggca
tttggaactaattcatgcgcagagaacaatggaggctgcagccatctgtgtttctttacg
ccccaggaggccaggtgtgcctgtcccatcggccttgagctgttgagtgacatgaagact
tgcatcattcctgaagccttcttagttttcacaagcagagcagcaattcataggatttcc
cttgaaaccaataataatgatgttgctattcctcttactggagtcaaggaagcatctgct
ctggattttgatgtctctgataacagaatctattggactgatgttagtttgaagaccata
agtcgagctttcatgaatgggagctctgttgaacatgtgattgagtttgggctagattat
cctgagggaatggctgtggactggatgggcaagaacctctactgggcagacactggaacc
aatcgcatcgaagtcgcccgcctggatggacagtacaggcaggtccttgtgtggaaggac
ttggacaacccaaggtctctggcacttgatcccaccaaaggatacatgtactggactgag
tggggaggcaaacccaggatcgttcgagcctacatggatgggacaaacagcatcactttg
gtggacaaagtggggcgtgccaatgacctcactattgattatgtggaccaaaggctctac
tggactgacttagacacaagcatgattgagtcatcaaatatgctgggacaagaacgagaa
atcatagcagatgatctacctcatccatttggattaacccagtacagtgactacatctac
tggacagactggaatcttcacagcatagagagagcagacaagaccagtgggaagaacagg
acccttattcagggccatctggattttgtgatggacatattggtcttccattcttctcgt
caggacggcttgaatgattgtgtgcagaataatggccattgtggtcacttgtgccttgcc
atcccaaatggatttaggtgtggctgtgctgctcattacaccttggatcccaacagcagg
aactgtagttccccagccagtttcctgctatttagccagaaatctgccatcagcaggatg
atacctgatgatcagcaaagcccagatatcatcctacccatgcatggtctgaggaacgtc
aaagctattgattacgatcccttagataaattgatctactgggtggatggacgccagaat
attataaaaagagccaaagatgatggcacccagcctttcactgtaatgagtaccccaaac
caaagtcagaacccggagaagcagccccacgacctcagcatcgatatctacagccacacc
ttgtactggacctgtgaggccacaaattccgtcaacgtgcaccggctgaacggggaatcc
atcgggatggtgctgcggggggaccacgacaggcccagagccatcgtggtgaacgcagag
cgcgggtacatgtacttcaccaacatgcaggagagagctcccaagattgagcgtgcagcc
ctggatggcacagagagagaagtgctttttacaactggcttgatccgaccggtagcactg
gtggttgacaacaaacttggaaagcttttctgggtggatgcggatctgaagcgcattgag
agctgtgacctgtcaggtgccaaccgggtgaccctggaggactccaacattcttcagccc
atgggactcactgtgctgggaaatcacctgtattggattgatcgtcagcagcagatgatt
gagagagtggagaaagtgaatgggtacaaaaggactagaattcaaggcaggattgctcac
ctaacgggcattcatgctgtggaagagcttgatatggaagaattctctgtgcatccatgc
tcccgtgacaatggtgggtgttcgcacatctgcattgccaaaggggatggaactccaaga
tgttcatgccctgagcaccttgtgcttctacagaatctcttaacatgtggagaacctcca
acttgttccccagaccagtttacatgtgcaactggagagattgactgtatcccaatggca
tggaggtgtgatgggtttcctgaatgtgatgaccagagtgatgaagacagctgccccata
tgctctgcatcccagttccagtgcgagaagggacagtgcattgatgctcacttgcggtgt
aatggagaaattgactgtcaagataaatctgatgaagcagattgtgatacaatttgtctg
cccaaccagttccgatgcgcgagcgggcagtgcatcctcctgaagcagcagtgtgactcc
tttccggactgcatcgatggctctgacgagctcatgtgtgaaaaatcgaagccagcatca
gacgagtcccagccacacagcagtgccattggtcctgtcattgggataatactgtccctt
tttgtcatgggaggaatgtacttcgtgtgccagcgcgtggtgtgccagcgctacgccggg
cccaacagtccctttccacacgagtatgtcagtggtaccccccacgtccctctcaatttc
atcgctccaggaagttctcagcatggcacttttactggcatctcttgtggaaagtccatg
attagctccatgagcctcatgggaggaagcagtggtgccccattgtatgacagaaaccat
gtcactggagcatcttcaagcagctcatccagcactaaagccactttctatccacagatt
ttgaaccctcctccttccccagctaccgatcgctccttatacaatgcagagatgttttat
tcctcaaacattccttcaaacacaagatcttacaggccgtacctgatacgagggatagct
ccacccacaaccccatgcagcacagatgtctgtgacagtgactataccacgagtcgatgg
aaggccaacaaatactatatagatttaaattcagactcagacccttatccccctccaccc
acacctcgcagtcagtacatgtcggcagaggaaagttgccctccatctcctgccaccgaa
cgaagctattttcacctctacccccctccaccctctccttgtacagactcttcatga
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integrated database retrieval system
