Pyrgilauda ruficollis (rufous-necked snowfinch): 121360973
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Entry
121360973 CDS
T07608
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121360973 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121360973 (COPB1)
Membrane trafficking [BR:
pruf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121360973 (COPB1)
Exosome [BR:
pruf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121360973 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
121360973
NCBI-ProteinID:
XP_041337147
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFENLRPLIIEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEVSVGPAQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVSLVQEKKKQNSFNAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTIQPDDPISFMQLTAKNEMSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNVVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagagaacgtgtgttacaccttgatcaatgttcccatggactcagagcca
ccttctgaaatcagcttaaaaaatgacctagaaaaaggagatgtcaagttgaagacagag
gccttgaagaaggtaatcattatgattctgaatggtgagaagctgcctgggctcctgatg
accatcatacgttttgtgctgcctctccaagaccataccatcaaaaagctgctgctcgtc
ttttgggagatcgtgccaaagaccactccagatggcaggctcctgcaggaaatgatcctt
gtgtgtgatgcatacagaaaggatctccagcaccccaatgagtttattcgaggctccact
ctgcgctttctgtgcaagctgaaggaagccgagctgctggagcccttgatgccggccatc
cgcgcgtgcctggagcaccggcacagctacgtgcgccgcaacgccgtcctggccatctac
accatctacaggaactttgaacatcttatacctgatgctcctgaactgatccatgatttc
ttggtgaatgagaaagatgcaagctgcaaaagaaatgcatttatgatgctgattcatgca
gatcaggatcgagctttggattacttgagtacctgtattgaccaagtgcagacctttggt
gacatactgcagttggttattgttgaactaatttacaaggtctgtcacgcgaatccatca
gagagagctcggttcattcgctgcatctacaacctgctgcagtcctcgagtcctgcagtg
aagtatgaggctgcaggtactctggttacactctccagtgcacccacagcaatcaaggct
gctgcccaatgctacatagatttgattattaaagaaagtgataataatgtgaaactgatt
gtcttggatcgtttgattgagttgaaggagcatccctcccatgaacgagtgttgcaggat
ctagttatggacatcctcagagtgttgagcactccagatctagaagtgcgcaaaaagacc
cttcagctggctctggatcttgtgtcttcaagaaatgtggaggagcttgtgattgttctg
aagaaggaagtgattaaaactaataatgtgacagagcatgaagatacagacaagtacaga
cagctcctggttcggacactgcattcctgtagtgttcgcttcccagacatggctgcaaat
gttattccagtgctgatggagttccttagtgacaacaacgaagcggcagccgccgatgtc
ctggagtttgtgcgggaagcaatccagagatttgaaaacctcagacctcttattattgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttatcgaggagcattatgg
atccttggagaatattgcagtacaaaggaggatatacaaagtgtgatgacggaggttcgc
agatcactcggagagatcccaatagtagaatctgaaatcaagaaagaagctggtgagctc
aaacctgaagaagaggtgtctgtgggtccagcccaaaaattagtgacagagatgggcact
tatgcaacacaaagcgctcttagcagttcccgacctgccaaaaaggaagaagacagacct
cccctacgaggattcttgctggatggagatttctttgttgcagcttcccttgctacaact
ttaaccaagatcgctttacgttatgtgtccctagttcaggaaaagaagaaacaaaattcc
tttaatgctgaagctatgctgctgatggccactattctccacttgggaaagtcttctctt
cccaagaagccaattacagatgatgatgtggatcgtatttcgttgtgtctgaaagtgttg
tcagagtgttctcctctcatgaatgacattttcaacaaagaatgcaggcagtccctctct
cacatgctgtcagccaagctagaagaggagaaactttcccagaagaaagaatctgagaag
aggaatgtgacaattcagccagatgatcccatttccttcatgcagcttactgctaaaaat
gaaatgagctcaaaagaagaccagttccagcttagccttcttgcagcaatgggaaacaca
cagaggaaagaggctgctgatcctcttgcttccaaacttaataaggtcactcagctgaca
ggtttctcagaccctgtgtatgcagaagcctatgtccacgtcaatcagtatgacatcgtg
ctggatgtgctcgtggtcaaccagaccagtgacaccctgcagaactgcaccctggagctg
gccacgctgggtgacttgaaacttgtggaaaaaccatctcctctgacacttgctccacat
gattttgcaaacattaaagctaatgtcaaagttgcttcaacagaaaatggaataattttt
ggtaatgttgtgtacgatgtctctggagcagccagcgacagaaactgtgtggttctcagt
gatattcacattgacatcatggattacatccagcctgcttcctgcacagatgctgagttc
agacagatgtgggcagaatttgaatgggaaaacaaagtaacagtgaatacaaatatcatt
gatttaaatgaatacttacagcacatactgaagtcaaccaatatgaaatgcctgactcca
gagaaggctctttcaggctattgtggctttatggcagccaatctttacgcccgttccatc
tttggagaagatgccctggccaatgtgagcattgagaagccgattcacctggggccagag
gcgcctgtcacgggccacatacggatccgggccaagagtcagggaatggccctgagcctg
ggagataagatcaatctgtctcagaagaagacaagtttataa
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