Pyrgilauda ruficollis (rufous-necked snowfinch): 121360981
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Entry
121360981 CDS
T07608
Symbol
TRPM5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121360981 (TRPM5)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121360981 (TRPM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Mso1_Sec1_bdg
Motif
Other DBs
NCBI-GeneID:
121360981
NCBI-ProteinID:
XP_041337167
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MEEMETKLCSSDKEEAFKRELPYCIGEIDFTASGKNHGKFMKVQSTVHPGIIFEVMLNKW
KLPAPNLVISLVGGEEDFQMKPWLRDTLKKGFIKAAESTGAWIFTSALRVGVTRHLVQAV
RDLALASTSSTLSVIAIGITSLREIQHREILENTKSESLVHYHSEDNTQGPLYSLDHNHS
HFILVDHTAPEEPDGTAELRLALERYISEQRTGYGGTGSIEIPVLCLLVNGGPGTLERIC
SGLENSAPWLILAGSGGTADILAAFMNDPQLIMPEAVEKQFKEKFPAESFSWKAILQWTV
TIQNIISHQHLLTLHNFEQDGSEELDTVILKALVKACKSQSQEAQEYLDELKLAVAWNRV
DIAKSEIFNGDVEWKSCDLEEVMMDALVNNKPEFVKLFIDNGANIYEFLTYSRLQRLYCS
ISQKCLLYELLLKKHEESKLTLAGLTGQQQSEQKEICPLFTLSEVSRVLKDFLHDACKGF
YQDLRHGGKKKSDKTNTKRLPGPLDMNQKSENPWRDLFVWAVLQNRHKMANYFWAMGQEG
VASALAACKILKEMSRLETETKAACIMKEAKYEQLAVELFSECYHNSEERAFALLVRKNQ
YWSKTTCLQLATEADAKSFFAHDGVQAFLTKIWWGDMSTSTQILKLICAFWCPFLIYTNL
ISFSEEKQSKNEPEPFRELDSLDSERTLFFSKEEDRGNDTLEKQNPSANTAWATFTFTRW
RKFWSAPVTVFMGNVIMYFAFLFLFTYVLLLDFKPPPPQGPSVKEIVLYFWVFTLVLEEI
RQSFYTDEDTNLMKKFKLYVEDNWNKCDMVTIFLFIIGVICRMLNSTFQAGRTILAIDFM
VFTLRLIHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVTTQALLHPDDSRVE
WIFRRVLYRPYLQIFGQIPLDEIDTSRAYPRNCTFNPLQMLQENTPSCPNSYANWLVILL
LVIFLLVTNVLLMNLLIAMFSYTFQVVQGNTDIFWKVQRYNLIVEYHGRPALAPPFIIIN
HITLVLRRLFNKMEHKKKHLERDLPVGLDQKIITWELVQKEHYLVNLEQEKKESNEERLK
ATSNKVDNLSKYFSGLKEQEKRFKLLEAQICYCTAVISSMAEGLTKTNLLCTQPAPNYTC
VKTANTEAPLPQRSEREEHADQFETDIEYIDN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggaaaccaagctctgcagcagtgacaaagaggaagccttcaaaagagaa
ttaccatactgcataggagaaatagacttcacagcttctgggaagaatcatggaaagttt
atgaaggtccagagtaccgttcaccctggaattatatttgaagttatgctcaacaaatgg
aagctacctgctcccaatttggttatctctttagtagggggagaagaagattttcagatg
aagccttggctacgggacaccttaaagaaaggatttataaaggcagctgaaagcacaggt
gcctggattttcaccagtgctctgcgtgtaggagtgacaaggcacttggtgcaagcagtc
cgagatcttgccctggccagtacctcatccaccctgagcgtgattgccataggaataact
tcactcagggaaatccagcacagggaaatcctggaaaacacaaagagtgaaagccttgta
cactaccactcagaagacaacacccaaggcccactgtattccttggatcacaaccactcc
catttcattttggtggaccacacggcgccggaggagccggacggaaccgctgagctccgc
ctcgccttggaaaggtacatctcagagcagcgcacgggatacgggggaacaggtagcatc
gagatccctgtgctttgcctactggtgaatggaggaccaggcacacttgagagaatttgc
agcgggttggaaaattctgctccctggcttatcttagcagggtctggaggtacagctgac
atcttagcagcattcatgaatgacccacagcttatcatgccagaagctgttgaaaagcaa
tttaaggagaaattccctgcagagagcttctcgtggaaggccattctccagtggacagtg
acgattcagaatattatttcacaccagcatcttctaactctgcacaactttgagcaagat
ggttcagaagaactagacacagtcattttgaaagccttagtaaaagcctgtaaaagtcag
agtcaggaggctcaggaatatctggatgaactgaaactggcagtggcctggaatagggtc
gacattgctaaaagtgaaatattcaatggtgacgtggagtggaagtcctgtgacctggag
gaagtgatgatggatgctctagtcaacaacaaaccagaatttgtgaagttatttattgac
aatggggctaacatatatgaattcctgacctacagtcgtctgcagagactctactgctcc
atttctcagaaatgtctcctctatgaacttctcctgaagaagcatgaagaaagcaaactg
accttggcagggctcactggtcagcagcagagtgagcagaaggagatctgccccctcttc
actctcagcgaggtctctagagtcctcaaggatttccttcatgatgcatgcaaaggtttc
tatcaagacctcagacatggaggcaagaagaaatctgacaaaacgaacacaaagcgatta
cctgggcccttggacatgaaccagaaaagcgaaaatccttggagggatttgtttgtgtgg
gcagtacttcaaaaccggcacaagatggcaaactatttctgggctatgggtcaggagggt
gtagcttcagctctggcagcctgcaagatcctgaaagagatgtcccgcctggagacggag
accaaagcagcctgtataatgaaagaggccaagtatgagcagctcgctgttgaactgttt
agtgaatgctaccacaacagtgaggagagagcatttgctctgttggtgagaaaaaatcag
tactggagcaaaaccacgtgccttcagctggccacagaagcagatgcaaagtctttcttt
gcacatgatggtgtccaggccttcctgacgaaaatatggtggggagacatgtctacaagc
acacagatcctcaagttaatctgtgcattctggtgtcctttcctaatctacaccaattta
atatcattcagtgaagaaaaacaatcaaagaatgagccagagccattcagagagctggac
agtttggactcagagaggactctgtttttctccaaggaagaagatagaggaaatgacaca
ttggaaaaacagaacccttctgcaaacacagcatgggcaacattcacgtttacccggtgg
agaaaattctggagtgcccctgtaactgtgtttatggggaatgttataatgtactttgct
tttctctttctattcacttatgtccttttactggactttaaaccacctccacctcagggt
ccatctgttaaagaaattgtgctctacttctgggtgtttacccttgtcttggaagagatc
cgacagagtttctatacagatgaagacacaaatttaatgaaaaaatttaaactgtatgtg
gaggataactggaataaatgtgatatggtcaccatctttctcttcataattggggtaatc
tgcaggatgctgaactcaacttttcaagctggtcgtacaatactcgccattgattttatg
gtgtttacacttagacttatccatatttttgcaattcacaaacaacttggaccaaagatc
ataattgtggaaagaatgatgaaggatgttttcttctttctgtttttcttgagcgtgtgg
ctcattgcctatggtgtgacaactcaagctctgctccatcccgatgacagccgagtggaa
tggatattcagaagggttctctatcgtccctaccttcagatatttggccagattccactg
gatgaaatagacacatcacgagcatatcccaggaactgcacgtttaaccccctgcagatg
ctacaggagaacacaccatcctgccccaacagctacgccaactggctcgtcatactcctg
ctggtcatcttcctactggtcacaaacgtcctgctcatgaacctcctgattgctatgttc
agttacacttttcaagttgtgcagggcaatacagacatcttttggaaagtgcagcgctac
aacctgattgttgaataccatggccggcccgccttagcaccaccatttatcattatcaac
cacattactctggttctcagaagactcttcaacaaaatggaacacaagaaaaaacacctg
gaaagagatcttccagtgggcctcgatcaaaaaatcataacatgggagctggtgcaaaaa
gaacattatctagtaaaccttgagcaagaaaagaaagaaagcaatgaagaaaggctgaag
gccacatctaataaggtggataatttgtctaagtattttagtgggttgaaagaacaagaa
aaacgatttaaacttctggaagcccagatttgctactgtacagctgttatctcctccatg
gcagagggtttaacaaaaaccaacctcttgtgcactcaaccagctccaaactatacatgt
gtgaagactgccaacacggaagcacctttgccacaaagaagtgaaagagaagagcatgca
gatcagtttgagactgacattgaatacattgataattaa
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