Pyrgilauda ruficollis (rufous-necked snowfinch): 121361002
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Entry
121361002 CDS
T07608
Symbol
CD44
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121361002 (CD44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121361002 (CD44)
04090 CD molecules [BR:
pruf04090
]
121361002 (CD44)
00535 Proteoglycans [BR:
pruf00535
]
121361002 (CD44)
00536 Glycosaminoglycan binding proteins [BR:
pruf00536
]
121361002 (CD44)
Exosome [BR:
pruf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121361002 (CD44)
Exosomal proteins of other body fluids (saliva and urine)
121361002 (CD44)
Exosomal proteins of colorectal cancer cells
121361002 (CD44)
Exosomal proteins of bladder cancer cells
121361002 (CD44)
CD molecules [BR:
pruf04090
]
Proteins
121361002 (CD44)
Proteoglycans [BR:
pruf00535
]
Cell surface proteoglycans
Others
121361002 (CD44)
Glycosaminoglycan binding proteins [BR:
pruf00536
]
Hyaluronan
Cell surface receptors
121361002 (CD44)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
TMEM154
Motif
Other DBs
NCBI-GeneID:
121361002
NCBI-ProteinID:
XP_041337215
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MANFSLWTVFGLCLLKLCLAETEFNVSCRYGGVFHVEKNGRYSLTRSEAVELCRALNSTL
ATLEQLKKAHELGFETCRYGFVVGHIVIPRINPYHLCAANNTGIYKLSANTTARYDAYCY
NATETEEKTCEPVVKIDTSLLSNQDETVIDNADGSRYNADGTRHTGGESSTSGVDDENAG
SGSTHETTPMDASISRSSPLYYGSPTPVSQLPDHSSGGGEKGIPGKDYDDEFTSVSPDIS
FATVAGDFHEEDDGQYPASTTMVPSRGAKQNDSAQDPVVYPGWDEGEDYATQPAVMDRVI
PSRESNHERESSTTAAVASPDGAHHKEPTQALLPWDYEAEVSTEGITNPTDAPGDEVLHR
TTGTMIKAVTASTDILAPEDITQEVWAPHLVVTAASSPGGAHHKEPTQTPLPSDDEPVQG
TEGITNPTDMHRDEVLHRTTASVTKAGSTSSVYGNQGPHKEHFESTTSPGETATTKIDSQ
PRSARVPDWLIIVAALVVLALILAVCIAVNSRRRCGQKKKLVINNGKGAVEDRKTSELNG
DISKSQEMVHLVHKEQSNDRTQACDEFLTVNETQNHHEFDMKTGV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttctccttatggacagtttttggattatgtttgctgaagctctgtctagca
gaaacagaattcaatgtaagttgcagatatggaggagtttttcacgttgaaaaaaatggt
cgctacagtctcacacgatctgaagcagttgaactctgcagagctctcaacagcaccttg
gcaacactagagcagctgaagaaagctcatgagcttggatttgaaacttgcaggtatggt
ttcgtggtggggcatattgttatcccccggatcaatccatatcatctttgtgcagcaaat
aacactggcatttacaaactctcagcaaacacaactgcccggtatgatgcatactgttac
aatgcgacagaaacagaggaaaaaacatgtgagccagttgtaaaaatagatacttcctta
ctcagtaatcaggatgaaacagtcattgacaacgcagacggctcccgttacaacgcggac
ggcacacgtcacaccggtggagagtcctccacctctggggtggatgatgaaaatgcaggc
agtggatcaactcatgagacaactcccatggatgcctccatcagcaggtccagccccttg
tattatggaagtcctactccagtctcacagctgccagatcattcttctggaggaggtgaa
aaaggaattcctggaaaagactatgatgatgaatttacatctgtatcacctgacatctct
ttcgcgacggtggctggtgatttccatgaagaagatgacggacagtatcctgcaagtact
actatggtccccagccgtggggccaaacagaacgactcagcgcaagacccagtggtgtat
ccaggctgggatgagggagaggattatgccacacagcctgctgtaatggatagagttatt
ccttccagagagagcaatcatgaaagagagtcttccactacagcagctgttgcctctcct
gatggtgcccaccacaaagagccaactcaagcacttctgccttgggattatgaagcagaa
gtgagcactgaaggcatcacgaatcccacggatgcccctggggatgaagttctccacagg
accacaggcactatgatcaaagctgtcacagcctccactgacattctggcaccagaagat
ataacccaggaagtatgggcacctcaccttgtggtaacagctgcttcctctcctggtggt
gcccaccacaaagagccaactcaaacacctctgccttcggatgatgagccagttcagggc
actgagggcatcacaaatcccacggatatgcacagagatgaagtcctccacaggaccaca
gccagtgtgaccaaagctggctctacctctagtgtatatggtaaccaaggaccacacaag
gaacattttgaatccacgacttcccctggagagaccgccacaacaaaaatagattcacaa
ccaaggtcggcccgtgtaccagactggctgatcatcgtggctgctctcgtggtgcttgca
ttgatcctggcagtgtgcattgctgtcaacagtcgcaggagatgtgggcagaagaaaaag
ctagtgattaacaatggcaaaggggcagtggaggacaggaagacaagtgaattaaatgga
gatatcagcaaatcacaagaaatggtgcacttggttcataaagaacagtcaaatgaccga
acacaagcatgtgatgaattcctgactgtgaatgaaacacaaaatcatcacgagtttgac
atgaagactggagtgtaa
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