Pyrgilauda ruficollis (rufous-necked snowfinch): 121361067
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Entry
121361067 CDS
T07608
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121361067 (TNRC6B)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121361067 (TNRC6B)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121361067 (TNRC6B)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121361067 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
121361067
NCBI-ProteinID:
XP_041337321
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MQADEGEVLEEGSPKVSEMEHEDFVMEGHGKTPPPGEENKQEKEQEREEQLMEDKKRKKE
DKKKKDSAQKVTDQKTKVPEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKRVAVPNGQPP
SAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPSPAAPGANPNNAQPVT
GALLQSDSGTATDSAIGGAAASNYANSTWGPGASSNSGTNANPTHIWDKVIVDGSDMEEW
PCIASKDAESSSENTTDNNSASNPGLEKNALPGSTTSNKGKGSQCQSGSAGNECNLGAWK
SDPKAKSVQSSNPAAESNNGLGNWRNLSGQDRISPGSGFSNFNPNSNPSAWPALVQEGNS
RKGTLESDSGSSNAQISTVGQTSREQQSKMENAGVNFVSGREQAQIHNTDGPKNGNTNSL
NLSSPNPMENKGMPFEMGLGNPSRSTDTPSQSTGERKTGSVGSWGTSRGSSGTETVSGQS
NSGNHGNNGKDREDSWKGASVQKPNGSRSDSWENNNRSTGGGSWNFGPQHANESKWGEGN
KLTSGVSQGEWKQLSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGR
SSSSAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSN
TGWGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNSGGWGDVPSQSNQNKSGW
GELSTPTEWKDPKNTGGWNDYKNSNSSNWGGGRQEEKSSSSWNDSSSKDQGWGGRQSNQG
WSSGKNGWGEEVDQTKNSNWESAGNKPVSGWGEGGQNEIGTWGNGANTSSASKGGWDDCK
RTSTWNETGRQPNSWNKQQQQHQQQQQQETSGSWGPPPQTPSNGRPPNSNWNNGPQPAAP
KEEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPT
PMTSKSQASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAPSNAPNAM
KSSSKSMQDGWGESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKTQ
MKCALKGGNSDSWMNPLSKQFSNMGLLSQTDDIPGSKMDLSVGGLPDKKFEVDKRAVNLG
DFNDMMRKDRSGFRPPNSKDMGTTDSGPYFEKGGNHGLFGNSTAQSRGMHTPVQPLNPSP
NIRAQVPPQFLSPQVSASMLKQFPNSGLNPGLFNMGPQLSPQQIAMLSQLPQIPQFQLAC
QLLLQQQQQQQLLQSQRKLSQAVRQQQEQQIARMVSALQQQQQQRQPGMKHSPSHPVGPK
PHLDSMVPNPLNVGLSDLQTKGQIPGYGSGGFGSSGMDYGMVGGKEAGTESRFKQWTMME
GLPSVASQDANMHKNGAIVPPGKARGGSPYNQFDIIQGDPLSSHAGPAGDSWLPAKSPPT
NKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRD
NTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPTHLSNK
MWKNHISSRNTTGLPRPPPGLTNPKPSSPWNSTAPRSVRGWGAQDSRLGSASAWSDGGSV
RPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYNTKQEAAKAQTALH
MCVLGNTTILAEFATDEEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQNQTDPVGPALN
LFGGSTGLGQWSSGGGGGSSGGDLTGASLWGPPNYSSSLWGVPSVEDPHRMGSPAPLLPG
DLLGGGSDSI
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatgagggagaagtactggaggaaggcagtcccaaggtcagtgagatggaa
catgaggattttgtaatggaggggcatggcaagactccacctcctggtgaagaaaacaaa
caagagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagag
gataagaaaaagaaggactctgctcagaaggtcacagatcaaaaaaccaaagtgcccgaa
gtgacgaaaccaagtttaagccaaccagtggctgccagcccaattggcaactctccatcg
ccaccagtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgcca
agcgccgcccgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccac
aaagtgttactgaaacgtgggcagccccctccgccatcctgcatgctccttgggggtgga
gcagggcctccctccccagcagcaccaggagcaaacccaaacaacgcacaaccagtaaca
ggagcactgctgcagagcgacagtgggactgcaacagattcagcaattggaggtgctgct
gcttcaaattatgcaaattccacttggggtcctggagcctcctccaacagcggcaccaac
gccaacccaactcacatctgggacaaggtgattgtagacgggtctgacatggaagagtgg
ccttgtattgccagcaaagatgctgagtcttcttccgaaaacaccaccgataacaacagt
gcctcgaaccctggcttggagaagaacgctctgccaggaagcaccactagtaacaaagga
aaaggaagccagtgccagtctggaagcgctggaaacgaatgtaatcttggggcctggaaa
tctgatcccaaggctaaatctgttcaatcttccaaccctgctgccgagagtaacaatgga
cttggtaattggaggaacttgagtggacaagacagaatcagtcccggttctggtttcagc
aactttaacccaaatagcaacccatctgcttggccagcactggttcaagagggcaattct
aggaaaggaactctggaatctgatagtggtagctccaatgcacagattagcacagtaggt
cagacctctagggaacagcagtcaaagatggaaaatgcgggtgttaactttgtctctggc
agagaacaggctcaaattcataacactgatggaccaaaaaatggaaacactaactccttg
aacttaagttcaccaaaccctatggagaataagggaatgccctttgaaatgggcttgggg
aacccttccaggagcactgacaccccttctcaaagcactggagaaagaaagactgggagt
gttggatcttggggtacatctagggggtcttctggaactgaaacagtctctgggcagagc
aattctggaaaccatgggaacaatggaaaggatagagaggactcctggaaaggagcttct
gttcaaaaacctaatgggtcaagaagtgattcttgggaaaacaataaccggtctacgggt
ggtgggtcttggaactttggccctcagcatgcaaatgaaagcaaatggggtgaagggaac
aaattaacatctggggtctctcagggagaatggaaacagctgtctgggtctgatgaactg
aagattggagagtggagtggtccaaaccaaccaaattctagcactggagcatgggacaat
caaaaaggccaccctcttcctgaaaaccaaggcaattcccaggctccctgttggggaaga
tcttccagctctgcaggaagtgaggttggaggtcaaagcactggaagcaaccacaaagca
ggaagtagtgacagtcacaattctggacgccgatcatacaggcctacgcatcctgattgc
caggcagtcctgcagactttgctgagcaggactgacttggacccccgagtgctttcaaac
actggctggggccagactcaaattaagcaagataccgtgtgggatattgaagagatgcca
cgacccgaggggaagtctgataaaggaactgaggggtgggagagctctgccacacagaca
aagaactcagggggctggggcgatgtacccagccaaagcaatcaaaacaagtctggatgg
ggtgagctctcaaccccaacagagtggaaggaccccaaaaatactggaggatggaatgac
tataagaactccaattcttctaactggggaggaggaaggcaagaagaaaaatcatcttcc
tcttggaatgacagctctagtaaggatcaggggtggggtggacggcaaagtaatcaagga
tggtcttctggaaagaacggttggggagaggaagttgaccaaacaaaaaacagtaactgg
gaaagtgcaggaaacaagccagtgtctggttggggtgaaggtgggcaaaatgagattgga
acttggggtaatggtgcaaatacaagctctgcttcaaagggtggatgggacgattgtaaa
agaacttcaacatggaacgagacgggtcgacagcccaactcctggaacaagcagcagcaa
cagcaccagcagcagcagcagcaggagacttctggttcctggggtccaccgccccaaact
ccaagtaatgggcggcctccaaactcaaactggaacaacggaccacagccagctgccccc
aaagaggaggagcctagtggctgggaagaaccttctccacagtcaatcagtcgaaaaatg
gatattgatgatggcacttcagcgtggggagatcctagcagttataactacaagaatgtg
aatttgtgggacaagaactcacaaggaggacaggccccacgggagcagagcctgcctact
ccaatgactagcaaatcacaagcatcagtctggagcaaaagcactccacctgctccagat
aatggtacgtccgcctggggtgagccaaatgaaaccagtcccgggtggggtgaagtagat
gacacaggagcatcgactacaggctgggggaatgcaccttccaacgccccgaatgccatg
aaatctagttctaaatctatgcaagatggctggggagagagtgatgggccagtgacagga
acacgtcattccagctgggaagaggaggaggagggaggagtctggaacacagcaggctct
cagggaagcagttcctcccacaactcaacaagctggggacaaggaggaaagaaaacacaa
atgaagtgtgcattaaaaggaggaaatagtgattcgtggatgaaccctttatccaaacag
ttttcaaatatgggcttgctaagtcaaactgacgacattccaggcagtaagatggacttg
tctgtaggtggtctcccagataagaagtttgaggtagataaacgagctgtgaatctcggg
gattttaatgacatgatgagaaaggatcgatctgggttccgtccacctaattccaaagac
atgggaaccacagatagtgggccttattttgagaagggtggcaatcatggtttgtttgga
aacagcacagcacaatcgaggggcatgcacacaccagtgcagccactaaatccttccccc
aatatccgggcgcaagtgcctccccaattcctttctccccaggtttcggcctccatgctc
aaacagtttcccaacagtggcttgaatcctggtcttttcaatatgggcccccagctttct
ccacaacagattgccatgctgagccagcttccacagattccccagtttcaattagcttgt
cagctcctccttcagcagcagcagcagcaacagctgttacagagccagagaaagttatct
caagctgtgcgacaacagcaggagcaacagattgctcgtatggtgagtgccctccagcag
cagcagcagcagaggcagcctggcatgaagcattcaccatcccaccctgttgggcctaag
ccacatttagacagcatggtacccaatcctttgaatgtgggtctctcagatttacagacc
aaagggcagatacctggatacggttcaggtggctttggctcaagtggcatggattatggc
atggtgggagggaaagaggctggaacagaatcccgctttaaacagtggactatgatggaa
gggctgccctctgtggcttcacaagatgccaatatgcacaaaaatggtgcaatagtgccc
cctggaaaggctcgtggaggatcgccctacaaccagtttgacataatccagggcgacccg
ctcagcagccatgcaggccctgctggtgatagttggttacctgccaaatctccaccaaca
aacaagatcggaagtaaatccagcaatgccagctggcctccagagttccaaccaggagtg
ccatggaaaggtatacaaaacattgaccctgaatctgacccctatgtgacccctggaagt
gtgctgggggggacagccacatctcccattgtagatactgaccaccaacttctgcgggac
aacaccacagggtctaattcttccctcaacacctcgctgccttcacctggtgcctggccc
tacagtgcctctgacaattccttcaccaacgttcatagcacttcagcaaaattcagtgat
tacaaatcaacgtggtccccagatcccataggacacaatcccactcatctctccaacaag
atgtggaaaaaccatatttcctcaaggaacactacagggctgccccgcccacctcctggc
ctgaccaaccccaaaccatcatctccatggaacagcacagcaccccgatcggtcaggggc
tggggggcacaggactcaaggcttggctctgcatctgcttggagtgatggtggctcagtt
cgtcctagctactggctggttcttcacaatctcactccacagattgatgggtcaaccttg
aggacgatctgcatgcagcatggcccactgctgacattccatctgaacctgacccagggc
accgccctcatccgatataacaccaaacaggaggcggccaaggcccagactgcactgcac
atgtgtgtgttgggaaacactaccatcctggctgagtttgccacagatgaagaggttagt
cgctttttggcacaagctcagccccctacacctgcagcaaccccgagtgcacctgcagcg
ggctggcaatccctggagacaggacagaaccagacagatccagttggacctgctttgaat
ctctttggtgggtcaacagggcttgggcagtggagcagtggtggcggcggcggcagcagt
gggggtgatctcactggcgcttcattgtgggggcccccaaactattcttcaagcttgtgg
ggggtcccaagcgtagaggatccacaccgaatgggcagccctgctcccttactacctgga
gaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
