KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121361252
Entry
121361252         CDS       T07608                                 
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    121361252 (SMARCC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pruf03021]
    121361252 (SMARCC2)
   03036 Chromosome and associated proteins [BR:pruf03036]
    121361252 (SMARCC2)
Transcription machinery [BR:pruf03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     121361252 (SMARCC2)
Chromosome and associated proteins [BR:pruf03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    121361252 (SMARCC2)
   PBAF complex
    121361252 (SMARCC2)
   GBAF(ncBAF) complex
    121361252 (SMARCC2)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 Chromo CD99L2
Other DBs
NCBI-GeneID: 121361252
NCBI-ProteinID: XP_041337694
LinkDB
Position
Unknown
AA seq 983 aa
PPPPAPPGPACHGAAAAIAPPPPLSGPGGRAEPPAPQYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLGKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDPPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVTRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQQPSSASQQMLNFPDKGKEKPADMQNFGLRTDMYTKKNVPSKSKAAASATR
EWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPL
AYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKV
EEAAKVTGKADPAFGLESSGIAGTASEEPERIEESGAEEARAEAQPAEEKKEAKEPRDGT
AEEETKEKPGETPKKEEEKGKEVESEKEPDKGDGDSTGEPEKEKEVKEGPDEAPKEPPEP
EAERKAKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEI
KLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQHLQQQQQQQ
QPPLPPGAQPLPATGAQGLRLAD
NT seq 2952 nt   +upstreamnt  +downstreamnt
cccccgccgcccgccccgccgggcccggcctgtcacggcgccgccgccgccatcgcgccc
ccccctcccctcagcggccccggcggccgcgctgagcccccggccccgcagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtgttcggcaagcacgtcagcaacgcgcccctcaccaagctgccgatcaaatgc
ttcctggatttcaaggcggggggagccctgtgccacatcctggcagccgcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcgcatggaccgcaac
gtggagatgttcatgaccatcgagaaatccctggtgcagaacaactgcctggctcggccc
aacatcttcctgcaccaggagatcgagcccaaactgctggggaagctcaaggacatcgtc
aagaggcaccagggcaccgtgaccgaggacaagagcaacgcgtcccacatcgtctgcccc
gtgcctgggaacctggaggaagaggagtgggtccggcccgtcatgaagcgtgacaagcag
gtgctgctgcactgggggtactaccctgacagctatgacacctggatcccggccagcgag
atcgaggcgtccgtggaggatcccccgacaccggagaaaccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggattacgaggtgacg
gacgagaagagccccgtcacccgcaggaagaagatctcggccaagacactgacagatgag
gtgaacagccccgactcggatcggcgggacaagaaggggggtaactacaagaagaggaag
cgctcgccctcgccctcgcccacccctgaggccaagaagaagaacgcaaagaaaggaccc
tccaccccctataacaaatccaagcgcgggcaccgtgaggaggagcaggaggacctgacc
aaggacatggacgagccctcgcccgtccccaacgtggaggaggtgaccctgcccaaaaca
gtgaacaccaagaaggactcggagtcggctcccgtcaaggggggcaccatgacagacctg
gatgagcaggaagatgagagcatggagacagctggcaaggacgaggaggagaacggcacc
ggcagcaaaggggagcaggccaagaaccccgacctgcacgaggacaacgtgacagagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgcgccctgcccgagttcttcaacggcaaaaacaaatccaagacccccgaa
atatacctggcgtaccggaacttcatgatcgacacgtaccggctgaacccgcaggagtac
ctgacctccacggcctgccggcgcaacctggccggggacgtctgtgccatcatgcgggtc
cacgccttcctggagcagtggggtctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccgcccacctcgcacttccacgtgctggccgacacgccctcgggg
ctggtgccgctgcagcccaagacgccccagcagcccagctcggcctcgcagcagatgctg
aacttcccggacaagggcaaggagaagccggcggacatgcagaacttcgggctccgcacc
gacatgtacaccaagaagaacgtcccctccaagagcaaagcggccgccagcgccacgcgg
gagtggacggagcaggagacgctgctgctgctggaggccctggagatgtacaaggacgac
tggaacaaggtgtcggagcacgtgggcagccgcacgcaggacgagtgcatcctgcacttc
ctgcgcctgcccatcgaggatccctacctggaggactcggaggcctcgctgggacccctg
gcctaccagcccatccccttcagccagtcgggcaaccccgtcatgagcaccgtggccttc
ctggcctccgtggtggatccgcgcgtggcctcggccgccgccaagtcggctctggaggaa
ttctccaagatgaaggaggaggtgcccacggcgctggtggaggcccacgtgcgcaaggtg
gaggaggcggccaaggtgacgggcaaggccgaccccgccttcgggctggagagcagcggc
atcgccggcaccgcctcggaggagcccgagcgcatcgaggagagcggggcggaggaggcg
cgggcggaggcgcagccggccgaggagaagaaggaggcgaaggagcccagggatggcacc
gccgaggaggagaccaaggagaaacccggggaaacccccaagaaggaggaggagaagggg
aaggaggtggagagcgagaaggagcccgacaagggcgacggtgacagcacaggggagccc
gagaaggagaaggaggtgaaggaagggccggatgaggcacccaaggagcccccagagccc
gaggccgagcgcaaggccaaggtggagcgggacatcggcgaggggaacctgtccacggcc
gccgccgccgcgctggccgccgccgccgtcaaggccaagcacctggcggccgtggaggag
cgcaagatcaagtccctggtggcgctgctggtggagacgcagatgaagaagctggagatc
aaactgcggcacttcgaggagctggagaccatcatggaccgcgagcgcgaggccctggaa
taccaacggcagcagctgctggccgaccgccaggcgttccacatggagcagctgaaatac
gccgagatgcgcgcccggcagcagcacttccagcacctgcagcagcagcagcagcagcag
cagcccccgctgccccccggggcacagcccctgcccgccaccggtgctcagggattgcgg
ttggctgattaa

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