Pyrgilauda ruficollis (rufous-necked snowfinch): 121361372
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Entry
121361372 CDS
T07608
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121361372 (EBF1)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121361372 (EBF1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
121361372
NCBI-ProteinID:
XP_041337940
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All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDASTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccagcggagtgggagcagcatgaaggaagagcccctc
ggcgcggggatgaacgcggtgcggacgtggatgcagggagccggcgtcctggacgccagc
acggccgctcagagcggagtgggtctggcccgggctcacttcgagaagcagccgccttcc
aacctgaggaagtccaactttttccacttcgtcctggctctgtacgaccggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaggaagccaac
agcgaaaagaccaacaacgggatccactaccgcctgcagctgctctacagcaatgggatc
aggacggagcaggatttctacgtgcgactcatcgactccatgaccaagcaggcaatagta
tatgaaggccaagacaagaacccagaaatgtgccgagttctgctcacgcatgaaataatg
tgcagccgctgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaaatttttcctcaaatgtaaccaaaattgcctaaaa
aatgcaggaaaccctcgagacatgcgtcgattccaggtcgtggtgtctacaacagtcaat
gttgatggccatgtgctggcagtgtcagacaatatgtttgtgcacaacaattccaagcac
gggcggagagctcgaagactcgatccctcggaaggtacgccttcttatctggaacatgca
gctacaccatgtatcaaagccatcagtccaagtgaaggatggactacaggaggtgccact
gtcatcatcataggagacaatttctttgatgggttacaggtcatattcggcaccatgctg
gtttggagtgagctgattactccacatgccatccgtgtacagacgcctccccgacacatc
ccaggggttgtagaagtcacattgtcctacaagtctaagcagttttgcaagggaacgcct
ggaagattcatttacacagctctgaacgaacccaccattgactatggtttccaaaggtta
cagaaggttatcccccggcaccccggtgaccccgaacgcttgccaaaggaagtaatactt
aagagggctgctgatttagtagaagcactctatggtatgccacataataaccaggagata
atcctgaaaagagctgcagacatcgccgaagcgctctacagcgtcccccgcaaccacaac
cagctccccgccctcgccaacacctccgtccacgcgggaatgatgggggtgaattccttc
agtggccagctcgctgtcaatgtctctgaagcctcccaagccaccaaccagggtttcact
cgcaactccagcagtgtgtcacctcatggctacgtgccaagcaccaccccgcagcagaca
aactacaactctgtcacaacaagcatgaatggctatgggaatgctggaatgtcaaattta
ggcggttctccgaccttcctgaatggatctgctgccaattctccctatgccattgtgcca
tcaagtccgacgatggcctcctccactagcctcccctccaactgtagcagctcctctggg
attttctccttctcaccagccaacatggtctcagcggtgaaacagaagagtgcgtttgcg
cctgtcgtgagaccccaaacctccccccctcccacctgcaccagcaccaatggcaatagc
ctgcaagctatatctggcatgattgttccccccatgtga
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