Pyrgilauda ruficollis (rufous-necked snowfinch): 121361378
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Entry
121361378 CDS
T07608
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121361378 (SOX30)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121361378 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
121361378
NCBI-ProteinID:
XP_041337955
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Position
Unknown
AA seq
622 aa
AA seq
DB search
MERRVRHCRFRARASPASPPRHREVMGPLGGLRVQVQEHPSRPGHSEGAAKKSRCISAPA
AVEKEARSAIRRERDHERGSGDRQNEEKVLEQTGNKSWKRAAVQTERPNVTYEARPVKVE
KNDAPAGSLCELGNPPQDQNIPVLFQSLPPRSHVQLQGPLSSQLMHVTPVPVKQVPVQLQ
PLLQRPKIETKNVPLTVLPSDSGMPDTPFSKTKSGRVKRPMNAFMVWARIHRAAVAKANP
GANNAEISVQLGLEWSKLTEEQKQPYYEEANKIKLRHREEFPGWVYQPNKKKCSPPPGSA
VFSGTSQSTITTNPAGTLPFSSPTYSFVNTSVKNSIGRPVCESPAIRLPASSIQHAVPMT
LFQTTAASTTSVAVAVPTLPLRSVVSSQHFAEPAQTEAFVSPGLNFSLKRPAPVFAESFS
NRNPSNISSTSGRFSVSNSEIPGISVFPRGIALPQATSFIPSPAYVSAPIGQPASLFGGT
PQFPFCHPSFIPGPRCFPSSTFPLRAPFGYGNFSSSVPQCFGFYEERNQRQEVIFSTLDE
DYRFRAYSEERLCENQPVCGSPEVVSCQSTCSEERVLSPLPQLDVEVVEEVLPSPPSTPS
STYIVNVTDSDEEEEVKFFQVL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtcaggcactgccgcttccgcgcccgggcgagccccgcctcgcccccc
aggcacagggaggtcatgggccccctcggagggctgcgcgtccaagtgcaggagcacccg
agccggcccgggcacagcgagggagcggcgaagaagagcaggtgcatctcggctccggcg
gcggttgagaaagaggcccggagtgctatcaggagagaaagggaccatgaaaggggcagc
ggtgaccgccagaacgaggagaaggtcctggagcaaactgggaataagtcctggaaaaga
gctgccgtccaaacggagcgacccaacgtgacctatgaggcccgcccagtgaaggtggag
aagaacgatgccccggctggatccctgtgcgagcttgggaaccctcctcaagatcagaat
atcccggtcttgtttcagtccttacctcccaggtcccacgtacagcttcagggccctctt
tcctcgcagctgatgcatgtgactccagtgccggtaaaacaagtgccagttcaattgcag
cctctactgcagcggccaaagattgaaacaaaaaatgttcccctcacagtcctgccctcg
gattcagggatgccagacactccattcagcaagaccaaaagtggccgtgtgaagcgtccc
atgaacgcattcatggtgtgggccaggatccacagggctgctgtggccaaagccaacccc
ggggccaacaacgcagagatcagcgttcagctcggcctggagtggagcaaactcactgaa
gagcagaagcagccctattacgaggaagctaacaaaataaaactgaggcacagggaggaa
tttcctggttgggtttatcagccaaacaaaaagaagtgttctccaccacctggctctgct
gtattttcgggcacttcccagagtaccatcactacaaatccagctggcacccttcccttc
tcatcacctacttattcttttgtcaacaccagtgttaagaacagtattggacgtccagtc
tgtgagtctcccgcaatccgtctgccggcttcttccatccagcacgctgtgcccatgacc
cttttccagaccacggctgcaagcaccacctcagtggctgttgcagttccaaccctgccc
ctgcgctctgtggtttcatcacagcactttgctgaacctgctcagacagaagcttttgta
tcacctgggctcaatttctccctgaagagacctgcacccgtttttgctgagagcttcagc
aacagaaacccaagtaacatcagcagcactagtggcaggttttctgtctctaacagtgag
atcccagggatttctgtttttcctagaggcatagctcttccccaggctacctcttttatt
ccctcacctgcctacgtgtctgctcccattggacaaccagccagtttgtttggaggaacg
cctcagtttccattttgccacccttcctttatacctggacctcgctgtttcccctcaagc
acattcccactcagagctccgtttggctacgggaatttctccagctcggtgcctcagtgc
tttggcttttatgaggagaggaaccagaggcaggaggtgatattttccactctggatgaa
gactatcgtttcagggcatactcagaagagaggctgtgtgagaaccagcctgtctgtggg
agccctgaagtcgtgtcctgtcagagcacctgcagcgaggagcgagttctgagccccctg
ccgcagctggacgtggaagtggtagaggaggttttgccatcccccccatctactccctcc
agcacttatattgtcaatgtaactgacagtgatgaggaagaggaagtaaagttttttcaa
gtattgtaa
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