Pyrgilauda ruficollis (rufous-necked snowfinch): 121361432
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Entry
121361432 CDS
T07608
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41 isoform X1
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121361432 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pruf03041
]
121361432 (DDX41)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121361432 (DDX41)
Spliceosome [BR:
pruf03041
]
Complex C
Other components
Complex C specific factors
121361432 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
SecA_DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
121361432
NCBI-ProteinID:
XP_041338070
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MEAAAERKRQREEPADTSDLSGEDDDDYVPYVPVKQRKQQMLQKLLQMRRKVVSEEEQRD
SGSEQRGDEDDIPLGPQSNISLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRA
LMSVKEMAKGITYDDPIKTSWRAPRYILGMSEARHDRVRKKYHILVEGEGIPPPIKSFKE
MKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLE
QEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDGLPPLRCALCIGGMSVKE
QMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYF
KGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYLL
ECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDV
LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL
MDLKALLLEAKQKVPPVLQVLHCGDETMLDINGERGCAFCGGLGHRITDCPKLEAMQTKQ
VSNIGRKDYLAHSSMDF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggcggagcggaagaggcagcgcgaggagccggcggacacgtccgacctg
tccggagaggatgatgacgactacgtgccctacgtgcccgtcaagcagcgcaagcagcag
atgctgcagaagctgctgcagatgcggcggaaggtggtgtccgaggaggagcagcgggac
agcgggagcgagcagcgcggggacgaggatgacatcccgctgggaccgcagtccaacatc
agcctgctggaccagcaccagcacctcaaagagaaggcggaagctcggaaggagtcagcc
aaggagaagcagctgaaggaggaagagaagatcctggagagcgtggcagagggccgagct
ctcatgtcggtgaaggagatggccaagggcatcacctacgatgacccaatcaaaaccagc
tggagagctcctcgctacatcctgggcatgtcggaggcacggcacgaccgtgtgcgcaag
aagtaccacatcctggtggagggggagggcatcccaccccccatcaagagcttcaaggag
atgaagttcccagcagctatcctgagaggcttgaagaaaaaaggaatccagcagccaacg
cccatacagatccaaggcatccccacaatactctcaggaagggatatgattggcattgca
ttcactggttctgggaagaccttagtgttcaccctgccggtgatcatgttctgcctggag
caggagaagaggctgccgttctctaagcgagagggaccctatgggctcatcatctgtccc
tcgcgggagctggcccggcagacccacggcatcctggagtactactgtcgtctgctgcag
gaggatgggctgcccccgctgcgctgcgccctctgcattgggggcatgtctgtcaaggag
cagatggagaccatcaaacatggagtgcacatgatggtggcaacccccgggcgcctgatg
gacctgctgcagaagaagatggtgagcctggacatctgccggtacctggccttggatgag
gctgacaggatgatcgatatgggctttgagggggacatccgtaccatcttctcctacttc
aagggccagcggcaaaccctcctcttcagtgccacaatgcccaagaagatccagaacttt
gccaagagtgccctggtgaagcccatcaccattaacgttgggcgagcgggtgctgccagc
ctggatgttgtgcaggaggtggagtatgtgaaagaggaggccaagatggtgtacctgctg
gagtgcctgcagaagacccctccacctgtgctgatcttcgcagagaagaaggcagatgtc
gatgcaatccacgagtacctgctgctcaagggtgtggaagctgtggccatccatggaggg
aaagatcaggaagaacggacaaaagccattgaggccttccgggatgggaagaaggatgtc
ctggttgccactgacgtcgcttccaagggcctggacttcccagccatccagcacgtcatc
aactacgacatgccagaggagattgagaactatgttcaccgcatcgggcgtacgggccgt
tcaggcaacaccggcatcgccaccaccttcatcaacaaggcctgtgacgagtcagtgctg
atggacctgaaggccctgctcctggaggcaaagcagaaggtgccacctgtgctccaggtg
ctgcactgtggggacgagaccatgctggacatcaatggtgagcggggctgtgccttctgt
ggcggcctgggccatcgcatcaccgactgccccaagctggaggccatgcagaccaagcaa
gtcagcaacatcggccgcaaggactacctggcccacagctctatggacttctag
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