Pyrgilauda ruficollis (rufous-necked snowfinch): 121361576
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Entry
121361576 CDS
T07608
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04142
Lysosome
pruf04144
Endocytosis
pruf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121361576 (CLTC)
04142 Lysosome
121361576 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121361576 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121361576 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121361576 (CLTC)
Membrane trafficking [BR:
pruf04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
121361576 (CLTC)
Exosome [BR:
pruf04147
]
Exosomal proteins
Proteins found in most exosomes
121361576 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
121361576
NCBI-ProteinID:
XP_041338336
LinkDB
All DBs
Position
Unknown
AA seq
1761 aa
AA seq
DB search
MRPQIVPSGGASHPPLPLAPLAGIPPRGRPAAAGAGILPRRYPSAGGGSFRTAPLRHRGP
APPAPLSPARPGPERPAAAMAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIR
EKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKA
HTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK
QKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVR
GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGY
IHLYDLETGTCIYMNRISGETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNV
LQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRF
QSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSE
ELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNV
MRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQ
TRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVV
HTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIEL
FESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKN
FLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLD
VDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAK
IYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFK
SLSRYLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLP
NELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAIS
NELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMV
KEAIDSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTN
RLAELEEFINGPNNAHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAV
DGARKANSTRTWKEVCFACVDGKEFRLAQLCGLHIVVHADELEELINYYQDRGYFEELIT
MLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAEL
VFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLND
LLMVLSPRLDHTRAVTFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALR
TSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYA
SESKDTELAEELLQWFLQENKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQ
VMKEYLTKVDAIKEKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAP
FGYGYTAPPYGQPQPGFGYSM
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccccaaatagtcccttccggcggcgcatcacacccgccgctcccattggcgccg
ctcgccgggatccctccgcgcggccggccggcggcggcaggtgcgggtatccttccgcgg
cggtatccttccgccggcgggggcagcttccgcacggccccgctccgccatcgcggcccc
gctccgcccgcaccgctgagcccggcccggcccggcccggagcgccccgccgccgccatg
gcacagatcctgcccatccgcttccaggagcatctccagctccaaaatctgggcatcaac
ccagcaaacattgggttcagcactctgacaatggagtctgacaaattcatctgcatcaga
gagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaaccca
atccggagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcattgca
ttgaaagctgggaaaacgctgcaaatctttaacatcgagatgaagagcaagatgaaggct
cacaccatgacagatgatgtcaccttctggaagtggatctctctgaacactgttgccctc
gtgacggataatgcagtttaccactggagcatggagggggagtcccagcccgtgaagatg
tttgatcgccactccagccttgctggctgccagatcatcaactacagaactgatgccaag
cagaaatggctcttgctgactggaatatctgcacagcaaaaccgtgtagtgggggcaatg
cagctgtactctgtggacagaaaagtgtcccagcccatcgagggacatgcagccagcttt
gcacagttcaagatggaagggaatgctgaagaatctactctcttctgttttgcagtaaga
gggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaatcag
ccctttccaaagaaagctgtggacgtcttctttcctcctgaagcacaaagtgactttcct
gttgctatgcagatcagtgacaagcacgatgtggtgttcctcataacaaagtatggctac
atccacttgtatgacctggaaactggcacctgtatctacatgaacaggatcagtggagag
accatttttgttactgcacagcatgaagcaacagctggaattattggagtcaacagaaag
ggacaggtgctctcagtgtgtgtggaagaggagaacatcattccctacatcacaaacgtg
ctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcgggggctgag
gagctctttgccaggaaattcaatgcactctttgcacaagggaactattcagaggcagca
aaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccggttc
cagagtgttccagctcagccagggcagacttccccactcctgcagtattttggcattctg
ctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctccag
cagggccgcaagcagctcttggaaaaatggttaaaagaagataagctggagtgctcggag
gagctgggagatcttgtgaaatctgtggatcctacactagcacttagtgtctatctgaga
gccaacgttccaaacaaagtcatccaatgttttgctgaaacaggacaagtccagaagatt
gttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaatgta
atgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaagag
cctcttgcagatataacacagattgtggatgtctttatggaatataatttaatccagcaa
tgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtcccctgcaa
acacgtttacttgagatgaacctcatgcacgcgcctcaggttgcagatgccatcctggga
aaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaggctggt
ttgctgcagagagcactcgagcacttcacagacctctacgacatcaagcgtgcggtagtt
cacactcacctcctcaaccctgagtggttagtgaattattttgggtccttatcagtagag
gactctctggagtgtctgcgtgcgatgctgtccgctaacatccgtcagaacctgcagatc
tgtgtccaggtggcttccaaataccatgaacagctgtcaacacagtccctcattgagctc
tttgagtccttcaagagctttgaaggtttgttttatttcctgggctccattgtaaacttc
agccaggacccagatgtgcacttcaagtatattcaagctgcatgcaagacaggacaaatt
aaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaaaac
ttcctcaaggaagctaaactcactgaccagctgcctctcatcattgtgtgtgaccgcttt
gactttgtccacgacttggtgctgtatttgtatagaaataatctccaaaaatatattgag
atttatgtacaaaaggtgaatccaagccgtctgccggttgttattgggggactgcttgat
gtggattgctctgaagacgtgatcaagaacctcatccttgtagtgagaggtcaattttca
actgatgaacttgttgcagaggttgagaagagaaacaggctgaagctgcttctgccctgg
ctggaagcaagaattcacgagggctgtgaggagcctgccactcacaatgcactggccaag
atatacattgacagcaacaacaacccagagagattcctgcgtgagaatccctactatgac
agtcgtgttgttggcaagtactgtgagaagagggaccctcacctggcctgcgtggcttac
gagcgtggacagtgcgatctggagctgattaatgtgtgcaatgagaactccctcttcaag
agtctctcccgctacttagttcgtcgtaaggaccccgagctctgggccagtgtgctgctg
gaaagcaacccctacagaagacccctgattgaccaggttgtgcagactgcgctgtcagag
acccaggaccccgaggaagtctctgtcactgtgaaggccttcatgactgcagatcttccc
aatgagcttattgaactgctggagaaaattgttctggataattcagtgttcagtgagcac
aggaacctgcagaaccttctcatccttacagctatcaaggctgaccgcacccgtgtcatg
gagtacatcaatcgcctggataactacgatgcccctgatatagccaatattgctatcagc
aatgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatcagct
gtacaggtgttgatagagcacatcgggaacctggaccgtgcgtacgagtttgccgagcgc
tgcaatgaacctgcagtgtggagccagctggccaaagcacagctccagaaggggatggta
aaggaagcaattgactcctacattaaagcagatgatccttcctcatacatggaggttgtt
caagctgctaatgccagtggaaactgggaagaactggtgaagtatctgcagatggcacgc
aagaaggcccgggagtcatatgtggaaacagaattaatctttgctcttgctaaaacaaac
cgcctggcagagctagaggagttcatcaatggccccaacaatgcacatatccagcaggtt
ggtgatcgctgctatgatgagaagatgtatgaagcagccaagctcttgtacaacaacgtg
tccaacttcggccgcttggcctcaaccttggtgcacctcggcgagtaccaggcagccgtg
gatggcgctcggaaagccaacagcactcgcacgtggaaagaggtctgctttgcttgtgtg
gatggaaaagaattccgcctggctcagctgtgtgggctccatattgtagtgcatgcagat
gagctggaagagctaatcaactattaccaggatcgtgggtactttgaagagctgatcact
atgttggaagcagcactggggctggagcgagcacacatggggatgttcacagagctggca
attctctactccaagttcaagccacagaagatgagggagcacttggaactgttctggtcc
agagtcaacattcccaaggttctgagagctgcagagcaagcccatctctgggctgaactg
gttttcctgtatgataagtatgaagaatacgataatgccataatcacaatgatgaatcac
ccaacagatgcttggaaagaaggccagttcaaagatatcatcactaaggtggccaatgtg
gagctgtactacaaggcagtccaattctatttggaatttaagcctctgctgctcaatgat
ctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtcacgttcttcacaaag
gttaaacagctgcccctggttaagccttacctgcgctctgttcaaaatcacaacaacaaa
tcagtcaatgagtccctcaacaacctcttcattattgaagaagattaccaggctcttagg
acttctatagatgcttacgacaactttgacaacatttctcttgcccaacgtttggagaag
cacgagctaatagagttccggaggatcgccgcctatctcttcaaaggcaacaaccgctgg
aaacagagcgtggagctctgtaagaaggacaggctctacaaggatgccatgcagtacgct
tccgaatccaaagatactgagctggcagaagagctgctgcagtggttcttgcaggagaac
aagagggaatgctttggagcttgtctcttcacctgctacgatctcctaaggccggatgtt
gtcttggaaacagcgtggaggcacaacattatggactttgccatgccatactttatccag
gtcatgaaggaatatttgaccaaggttgatgcaataaaggaaaaggtggataaactggat
gcatcagagtctttgagaaaggaagaggagcaagctacagaaacacaacctattgtttat
ggccagccccagctgatgctgacagcaggacccagcgtggcagttcctccacaggcacct
tttggctatggctacacggcccctccgtacgggcagccgcagcccggcttcggctacagc
atgtga
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integrated database retrieval system
