Pyrgilauda ruficollis (rufous-necked snowfinch): 121361587
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Entry
121361587 CDS
T07608
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121361587 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121361587 (TRPV1)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121361587 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121361587
NCBI-ProteinID:
XP_041338361
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MSSILGKMKKFGSFDMEESEVTDEHTVTDGEDSVQETSDNPQGPLSSRVQPPKSNIFARR
GRFVMGDSDKDMAPMDSFCQMDHLTAPSVIKFHVNLERGKFHKLLSTDSITGCSEKAFRF
YDRRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKND
TIPLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARA
CGEFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTL
VEIADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAY
ILRREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEM
LLVEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVQKNEKPPFTFGYSTG
EYFRVTGEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLY
FCGQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLG
FSTAVVTLIEDDNEGQEINISDYARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTE
NYRFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENS
YLNCLRHSFRSGKQVLVGVTPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRR
NLSFSIKPGRVSGKHWKTLVPLLKDGEKRREEPQKAPEEVKLKPVLEPYFEPEDSEELKE
SIPKSA
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttggcaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacagtgacagatggggaggactctgtccaggaaacctctgacaac
ccccagggcccactcagctccagggtgcagccacccaaaagcaacatttttgcaagacgg
ggccgctttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccag
atggatcacctgacggcaccttctgtcatcaaattccatgtgaatttggagaggggcaaa
tttcacaagctcctatctacagattccatcacaggctgctcagaaaaagctttcagattt
tatgaccgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgac
ctgctactgtaccttaacagaaccttcaagcatctcacagatgaggagttcaaagagcct
gaaactggcaaaacctgtttactgaaagccatgctgaatctacatgatgggaaaaatgat
accattcccttgctgctggatattgcaaggaaaactggaaccctgaaagagtttgttaat
gcagaatatactgacaactactacaagggccagactgctcttcacattgccattgagagg
aggaacatgtacctggtgaagctcctggtccagaacggagcagatgttcatgccagagcc
tgtggggagttcttcaggaaaatcaaaggaaaatcaggcttttattttggagagctgcct
ttgtccctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccc
taccaggcagccaacattgctgctgaggactccatgggcaacatggtcctgcacacactg
gtggagattgcagataacaccaaggataacaccaagtttgtaaccaagatgtataataac
atactgatccttggtgccaaaattaatcccatcctcaagctggaagagctcaccaacaag
aaagggctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttac
atcctcagacgggagatcaaagaccctgagtgcagacacttgtccaggaagttcactgaa
tgggcatatggacctgtccactcctctctttatgacctgtcctgtattgacacctgtgag
aaaaactcagtgcttgagatccttgcctacagcagtgagacaccaaaccgtcacgagatg
ctgctggtggaaccccttaacaggctgctgcaagacaagtgggaccgctttgtcaagcac
ttgttttacttcaacttctttgtctacaccatgcacatcaccatcctcactgcagctgct
tactacagacctgtacagaagaatgaaaagccccccttcacctttggttacagcactggg
gaatattttcgagtaactggagagatcctgagtgtactgggaggcctctatttttttttc
agagggatccagtatttcgtgcagaggcgcccatcactcaggacactgatagttgatggc
tacagtgaggttcttttctttgtccactccctgctcctgctgagctctgtggtgctgtac
ttctgtggccaggagctctacgtggcctccatggtgttctccttggccctgggctgggcc
aacatgctctactacacccggggcttccagcagatggggatttactcggtcatgatcgcc
aagatgatccttagagatttatgtcgcttcatgtttgtctatctcgtattcctcttggga
ttttctacagctgtggtgactttgattgaagatgacaacgaggggcaggaaataaatatc
tctgactatgccaggtgctgccacgtgaaacggggccgcacctcctacaacagcctctac
tacacctgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagag
aattacaggttcaagtctgtgtttgtcatcctgctggtgctctatgtcatcctcacctac
atcctcctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacag
gagagcaagagcatctggaaactccagagagccatcacaatcctggacattgagaacagc
tacttgaactgtctgaggcactcgttccgctctgggaagcaagtcctggtgggggtcacc
cctgatggccaagatgattacagatggtgcttcagggttgatgaagtgaactggtccacg
tggaacactaatctgggcatcatcaatgaagaccctggctactctggggacctcagaaga
aatctcagtttctccattaagcctggcagagtttcagggaagcactggaaaacattggtt
ccacttctaaaagatggagagaagaggagagaagagcctcagaaggcaccagaagaagtc
aaattaaaacctgttttggaaccttattttgagccagaagattctgaggagttgaaagag
tcaattccaaagtcagcctaa
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