Pyrgilauda ruficollis (rufous-necked snowfinch): 121361604
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Entry
121361604 CDS
T07608
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pruf03021
]
121361604 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121361604 (SUPT6H)
Transcription machinery [BR:
pruf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121361604 (SUPT6H)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121361604 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
121361604
NCBI-ProteinID:
XP_041338387
LinkDB
All DBs
Position
Unknown
AA seq
1721 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQETSDYLDRGQASSFGRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQWLQEK
EAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagcgaagcagaggagtcagaggaggagtacaaccaggatggg
gaggttgtacccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagctgaacctcgatgaccaggatgagcaggggaacctgaaaggattcattaatgat
gatgacgatgaggaagaggaggaggaagccagtgactctggagactccgaggatgacgtt
ggccacaagaagagaaagcgcacttttgatgaccgcctggaggatgatgactttgacctc
attgaagaaaacttgggtgttaaagtcaaaagacaaaaattcaggcgtgtgcggaaaatg
tctgatgatgaggacgatgaagcagaagattatggaaaggaagaacatgaaaaggaagcc
attgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctccacaggaagaggaagaggaggaggaggaagatgaatctgacattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggactttgactac
gatgagtttgagaagtacaacgagtacgatgaggagatggaggaggagtacgagtacgag
gatgaggagacggaaggggagacgcgcgtgcggcccaagaagacggccaagaaacgcgtc
agtcgccgcagcatcttcgagatgtacgagcccagcgagctggagagcagccacctcacg
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccagtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttataggaat
gcctttgcaacacccaccatctccttgcaggaaacttctgactaccttgaccgtggacaa
gccagcagctttggccgcaaggggcccagcaccatccagaagattaaagaagccctgaat
ttcatgagaaatcagcattttgaggtcccgttcatcgccttctacagaaaggagtatgtg
gagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgacacggctgtttgagaagatgcaggcctaccag
tatgagcaaatctctgctgacccagacaagcctttggcagatggaataagggccctggat
actactgacatggagaggctgaaggacgtgcagtccatggacgagctgaaggatgtgtac
aatcacttcctgctgtactatggcagagacatccccaagatgcagaatgctgccaaggct
gctcgcaaaaagcaaaagcgtatccgggaggatggtgaagaagaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggtttggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcacgagacagagcagttccct
gcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagcccagaagca
gtgctggaaggagctcggtacatggtggctctgcagatcgccagggagcccttggtcaga
caggtgctgagacagactttccaagaacgagctaaaatcaacatttcaccaaccaaaaag
gggaagaaggatattgatgaggcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagagatgaccagttcctgaaaatgagcctggcagaggatgaggca
ctgctcaccatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acatactttgaggaaatcaagcagttctattaccgggacgagttcagtcaccaggtgcag
gagtggaaccggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagaattaaagaacaagctcttagtggaggccaaggagtatgtcctcaag
gcttgcagccgcaaactttacaactggctgaaggttgctgcatacaggccagatcagcag
gtggaggaagatgatgatttcatggatgagaaccaagggaaggggatccgggtgctgggc
attgccttttcatcagccagggaccaccctgtgttttgtgccctcgttaatggagagggt
gaggtgacagatttcctccgactgccacatttcacaaagagaaggaatgcctggcgtgag
gaggagagggaaaagaaggcccaggatattgaaacattgaaaaaattcctcctgaacaag
aagcctcatgtggtgacaattgcaggcgagaacagggatgctcagatgctgatggaggac
gtaaagagaattgttcatgagctggaccaagggcagcagctgtcctcaattggagtggag
ctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgtcaggccgtgtccctcgctcgccgcatccaggacccc
ctcattgagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaactccac
cctctgcaggagcacgtggtgaaggaggagctgctgaacgcgctctactgcgaattcatc
aaccgtgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctctgctgcagtacgtgtgtggcctgggaccacgcaaaggcactcacctgctgaagatc
ttaaaacagaacaacacccgtctggagaacaggacccagctggtcacgatgtgtcacatg
ggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcatcactgggt
gatagcactgattcctacattgaagtcctagatggctctagggtccatcctgaaacctat
gaatgggccaggaaaatggcagtggatgccctggaatacgatgagtcagctgaggatgca
aatcctgcaggagctctggaggagatcctggaaaaccccgagcgcctgaaggacctggat
ctcgatgcctttgctgaagaactggaaagacagggctatggtgacaagcacatcactttg
tatgacattcgagctgagctaagctgcagatacaaggacctgagaaccccgtaccgttct
cccaacacagaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggtaaaatgatcatctgcaatgtgactgggattgcccacaggcgcccacagggcgagagc
tacgaccaggcgatacggaatgatgaaactggcctttggcagtgccccttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggt
caggccattggagtgaagacacgcctggataatggtgttgctggcttcatcccaacaaaa
tttcttagtgacaaggtggtcaagaggccagaagaaagggtgaaggtgggaatgaccgtc
cactgccgcatcatgaagattgacattgagaaattcagtgcagacctgacctgcaggacc
tcagacctgatggacaagaacaatgagtggaaactgcccaaagacacctactacgacttc
gactccgaggcagcagatcacaaacaggaagaagacatgaaaagaaagcagcagaggaca
acgtacatcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagca
gagaagatgatggagaccatggaccaaggggatgtgattattcggccaagcagcaaaggg
gagaaccatctgactgtcacctggaaggtcaacgatggcatttaccagcacgtggatgtc
cgggaggagggcaaggagaatgccttcagcctgggctccatgctctggattaacacagag
gagtttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgcc
agagacctgttgaaccacaaatactatcaggactgcaatggtggagacaagaagaagctg
gaagagctgctgataaagaccaagaaagagaagccaacatttattccatactttattagt
gcctgtaaagacctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaagg
atagagtatgtgacagtgacaccagagggattccgctaccggggccaagtcttccctact
gtgaatggacttttccgatggtttaaggatcattatcaggaccctgttccaggcattacc
cccagcagcagcagtcggaccaggactccagcctccattaatgctactccagctaacatc
aacctggcagacctgacacgtgcagtgaatgctctaccacagaacatgacctcccagatg
ttcagtgccattgctgctgtgacaggccagggacagaacccaaatgccaccccagcacag
tggggctccagccagtatggctacgggggcagcggaggcggcagcagcgcgtaccacgtc
ttcacaactccagcacagcagccagtggccacccctctgatgacccccagctactcctac
actactcccagccagcccatcaccacaccccagtaccagctccaggccaacaccacaccc
cagtccacccagtctcagtcacagccctcatccagctccaggcagaggcagcagccaaag
accaacagccacgctgccatcgactggggcaagatggccgagcagtggctgcaggagaag
gaggctgagcggaggaaacagaagcagaggttgaccccccgcccctctcccagccccatg
atcgagagcacgcccatgtccatcgccggggacgccacgcctctcctggatgagatggat
cgatag
DBGET
integrated database retrieval system
