Pyrgilauda ruficollis (rufous-necked snowfinch): 121361663
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Entry
121361663 CDS
T07608
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121361663 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121361663 (RABGEF1)
Membrane trafficking [BR:
pruf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121361663 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
121361663 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
121361663
NCBI-ProteinID:
XP_041338521
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRAGAKKAAEEK
TPKQGQLGRERNADNILRDLKEIFTPSWELASPSEALAGKLKAEIQEAKAPSPSIHRQAS
IETDRVSKEFIEFIRTYQKPGQDIYKQCKLFLDTMSHKRDLSIEEQSECAQDFYQNVADR
LQTRWKVPPEKVEKAMDEVEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQM
LCVPVSEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASA
DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ
SLNLSQEDFDRFMTGQTSPKKQESDTFSPDVCLGVKQMCKSLDLLSQLNERQERIVSEAK
KLEKDLIDWTDGITKEVEDIVEKYPLEIKPKSQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaagtcagagcgcagggggatccacgtggatcagtcggagctgctgtgcaag
aagggctgtggttactatggcaatcctgcctggcaggggttttgctccaagtgctggagg
gaggaataccacaaggccaggcagaagcagattcaagaggattgggagctggcagagcgg
ctccagcgtgaggaggaagaagcctatgccagcagccagagcacccagggggctcagtcc
ctgaccttctcgaagtttgaggagaagaaaaccaacgagaaaacaagaaaggtcactact
gtgaagaagttcttcactgcttcctccagagcaggagctaagaaggcagctgaagagaaa
acccctaagcaaggacagcttgggagggagagaaatgctgataacattctcagggatttg
aaggagatttttactccctcctgggaactggcttccccttctgaagcgttggctggcaag
ctgaaagcagagatccaggaggccaaggctcccagcccttccatccacaggcaggccagc
atcgagacagaccgagtgtccaaggagttcatagaattcatcaggacataccagaagcct
ggccaggatatctacaagcaatgcaaactcttcttggacaccatgagtcataaaagggat
ttaagcattgaggaacaatctgaatgtgcccaggacttctaccaaaatgtagcagacagg
ctgcagacacgttggaaagtgccccctgaaaaagtggagaaggcaatggatgaagttgag
aaatacatcatgactcgccagtataaatatgttttttgccctgagacaactgatgatgag
aagaaagaccttgctgtccaaaagaggatcagggctctgcactgggtgactccccagatg
ctgtgtgttcctgtcagtgaggaaatcccagaagtctctgacatggttgtaaaggcaatt
acagacatcatcgagatggactccaagcgtgtccctcgggataagctggcctgcatcacc
aagtgcagcaagcacatcttcaatgccatcaagatcaccaagaacgagccagcctctgct
gatgatttcctgcccaccctgatttacatcgtgctcaaggggaaccccccacgcctgcag
tccaacatccagtacatcactcgcttctgcaaccccagcaggctgatgactggggaggat
ggatattatttcaccaacctgtgctgtgctgtggccttcattgaaaaactggatgctcag
tccttaaacctgagccaggaggattttgatcgcttcatgacgggccagacctccccaaaa
aagcaggaatctgacactttctcccctgatgtgtgcctgggggtgaagcagatgtgcaaa
agcttagacctcctctctcagttgaatgagagacaggaaagaattgtcagtgaagccaag
aagctggagaaagacctcattgattggactgatggcatcaccaaggaggtggaggatatt
gtggagaaatatcccttagaaatcaaaccaaaaagtcaagccttagcagccattgactca
gaaaacgtggagaatgacaagctgcccccaccactgcagcctcaggtttatgcagggtaa
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