Pyrgilauda ruficollis (rufous-necked snowfinch): 121361703
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Entry
121361703 CDS
T07608
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121361703 (VPS53)
Membrane trafficking [BR:
pruf04131
]
Protein recycling
Others
EARP complex
121361703 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
121361703 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
GrpE
Laminin_II
O_Spanin_T7
hAT-like_RNase-H
COG3_N
NBD94
Syndetin_C
COG5_N
MCPsignal
FUSC
Tropomyosin
Seryl_tRNA_N
Snf7
Motif
Other DBs
NCBI-GeneID:
121361703
NCBI-ProteinID:
XP_041338608
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MEEDEPELEAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINALFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRTGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPAEWCMTERIAVEFCHVTRAELSKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLADGTVQKKPEVPPPSSNPFLEDESGAEADEIVMEKSDTDKPKKPKVPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDTSLMERINLTGEMDTFSIVISN
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKR
SEQSSMLDLFRLRLPAPPPGGDGSGSLSLSAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagccggagctggaggccgggctggaggcggcgctggagctggcgccc
gccgtgcaggccgccatcgagcaggtatttcccagccaagatccactggacagagcagat
ttcaatgctgtggagtatattaatgctctctttcccactgagcaatctttggcaaacatt
gatgaagttgtgaacaagatcagactgaaaataaggaggttggatgacaacatccgaact
gtggtgaggggacagaccaacgtgggacaggatggcaggcaggccctggaagaagcccag
aaagccattcaacagctctttggtaaaattaaggatattaaagacaaggctgaaaaatct
gaacaaatggtgaaggaaatcaccagggatatcaagcagctggaccatgccaagcgtcac
ctgaccacctccatcaccaccctcaaccacctccacatgctggcagggggggtggattct
ctggaggctatgaccaggaggagacaatatggggaagttgccaaccttctccaaggtgtg
gtgaatgtgttggagcacttcaacaaatacatggggatccctcagattcgacagctctct
gaaagggtgaaggcagcacagaacgagttggggcagcagatcctggctgacttcgaggaa
gcctttccttcccaaggtacaaagaggactggtgggcccagcaatgtcctacgtgatgcc
tgcctggtagccaacgtcctggatcccaggatcaaacaggaaatcatcaagaaattcatt
aaacaacacctctcagagtatctggtccttttccaggaaaatcaagatgtggcctggctg
gacaagattgaccggcgctacgcctggatcaagaggcagctggtggattacgaggagaag
tacgggcgcatgttccccgccgagtggtgcatgacggagcgcatcgccgtggagttctgc
cacgtcaccagggcagagctctccaagatcatgcgcaccagggcgaaggagattgaggtg
aaattgcttttgtttgcaattcagaggacaaccaactttgaggggctcctggccaagcgt
ttctcaggctgcactcttgctgatggcacagtgcagaagaagccagaagtgccacctccc
tccagcaacccctttctggaggatgaaagtggggcagaggcagatgagattgtgatggag
aaaagtgatacagacaaaccaaagaagccaaaggtccctgacaatcctttccatggcatt
gtttccaagtgctttgagcctcacctttatgtgtacattgagtcccaggacaagaatctg
ggagagctgattgacaggtttgtggctgacttcaaggctcagggtccccccaagcccaac
gtggatgaaggaggagctgtgctgcccagctgtgctgacctctttgtgtactacaagaag
tgcatggtgcagtgctcccagctcagcactggggagcccatgatagccctgaccaccatc
ttccagaaatacctgcgggaatacgcctggaaaatcctctctggaaacctgcccaagaca
accagcagcagtggtgggctcaccatcacaagtttgctgaaagaaaaggaaggctctgaa
gtggcaaagtttactttagaagaactctgcctcatttgcagcatcctgagtactgcagaa
tattgcctggccaccacccagcagttggaagagaagctcaaagaaaaagtggatacaagc
ctaatggagagaatcaacctgacaggagagatggacactttcagcattgtgatctccaac
agcatccagctgttagtgcaggacctggatgcagcctgtgaccctgccctgactgccatg
agcaagatgcagtggcagaacgtggaacacgttggtgaccagagtccttatgtcacctca
gtgatcctccacatcaaacagaatgtccccatcatccgtgacaacctggcctccaccagg
aagtatttcactcagttctgcataaaatttgcaaactccttcattcccaagttcattaac
catctcttcaagtgcaaacctatcagcatggtgggtgcagaacagctgctgctggacact
cactccctgaagatggttctcctggatctgccctccattgggtcccaagtggtgaggaag
gctcctgccagctacacaaagatagtggtgaaaggcatgactcgggctgaaatgatcctg
aaggtggtgatggctccacacgagcctccagttgtgtttgtggacaattacatcaagctt
ctggctgactgcagcactgacacattccagaagatcctcgacatgaagggcctgaagagg
agcgagcagagcagcatgttggatcttttccgcctgcgcctccccgctcctccccccggc
ggcgacggctccggctccctctcgctgagcgctcccacgcccgagcaggaatcctcccgc
atccgcaaactggagaaactcatcaagaagagactctga
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integrated database retrieval system
