Pyrgilauda ruficollis (rufous-necked snowfinch): 121361788
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Entry
121361788 CDS
T07608
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03030
DNA replication
pruf03420
Nucleotide excision repair
pruf03430
Mismatch repair
pruf03440
Homologous recombination
pruf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121361788 (RPA1)
03420 Nucleotide excision repair
121361788 (RPA1)
03430 Mismatch repair
121361788 (RPA1)
03440 Homologous recombination
121361788 (RPA1)
03460 Fanconi anemia pathway
121361788 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121361788 (RPA1)
03032 DNA replication proteins [BR:
pruf03032
]
121361788 (RPA1)
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121361788 (RPA1)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121361788 (RPA1)
DNA replication proteins [BR:
pruf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
121361788 (RPA1)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
121361788 (RPA1)
MMR (mismatch excision repair)
121361788 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
121361788 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
Motif
Other DBs
NCBI-GeneID:
121361788
NCBI-ProteinID:
XP_041338734
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSVRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSARCICQVNRFIVNSLKDGRRVVILMDVNVLQTADQVGGPIGNPQPYNEG
QGQRPAAPAGNPAASKPQQQNGNLSGAGPAAPKYHAPSNQFGKASAPSGLKTPGGSQIKV
VPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADK
FFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVS
ISDLENTPKDSIVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGNE
AEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLEC
ASISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQWVTCFQDTAEFILGQNA
AFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSK
RLIANIRRNAQLG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggggccatcgcggccataatgcaaggggaggaagtcagc
aagccggtgctgcaagtcatcaatacacgggctattgccacaggaactgggcccccacgg
taccgagtgctgatgagtgatggggtgaacaccctctcctcattcatgttggcaacacag
ctgaactccctggtggaagaggaacgcttgtcagcccggtgtatttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggtgatcctgatggatgtaaacgtc
ctgcaaactgctgatcaggttggtggacctattggcaatccacagccatacaatgagggg
caagggcaacgtcctgcagctccagcaggaaacccagcagccagcaaaccacagcagcaa
aatggcaatttgtctggagcaggtcctgctgctcccaagtaccacgctccctccaaccag
tttggaaaagcaagtgctcccagtggcctgaagacacctggggggtctcagatcaaagtg
gtgccaattgccagcttgaatccataccagtccaagtggaccatttgtgctcgtgttacc
caaaaaggtcagatccgcacgtggagcaactctcgtggggaaggaaagcttttttccata
gagctggttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaag
ttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaagact
gctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgagact
tcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgtatcc
atctctgacttggagaacacgcccaaagactcgattgttgatgtaattggaatttgcaag
agctacgaagatgtcactaaaattatagtgaaagctaacaatagagaggtttcaaagagg
aacgtgcatctgatggatacatcagggaaactggtgacagctacactgtggggaaatgag
gctgaacagtttgatggttccagacaacctgtgattgccatcaaaggagcccgagtctct
gactttggtggcagaagcctgtctgtcctgtcctccagtacagttgtcatcaaccctgat
agcccagaggctttcaagctccgaggatggtttgactccgaggggcagcttctggaatgt
gcctccatctctgatgtgaggggtgggccagcagctggagcaaataccaattggaaaact
ttgtttgaagccaagtctgagaacttgggacaaggagataaggcagattattttagctgt
gtgggcacaattgtacatctgcgcaaagagaactgcatgtaccaggcatgtccctctcag
gattgcaacaagaaagtgatagaccagcagaacggactttaccgctgcgagaagtgtgac
cgcgaattccccaacttcaagtaccgcctgatgctcctggtgaccattgcagactgtctg
gagtatcagtgggtgacttgttttcaagacacagcagaattcattcttggccaaaatgca
gctttcctgggagaactgaaggaaaagaacgagcaggcttttgaagaagtgttccaaaat
gcaaacttcaacacctatgagttcaggatccgggtgaaactggagacttacaacgatgaa
tctcgtattaaggccacagcaatggacgtcaaacccgtgaactacagagaatacagcaag
aggttgattgccaacatcaggagaaatgctcagctgggatga
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integrated database retrieval system
