Pyrgilauda ruficollis (rufous-necked snowfinch): 121361980
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Entry
121361980 CDS
T07608
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121361980 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pruf02000
]
121361980 (ABCA4)
Transporters [BR:
pruf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121361980 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
Motif
Other DBs
NCBI-GeneID:
121361980
NCBI-ProteinID:
XP_041339073
LinkDB
All DBs
Position
Unknown
AA seq
2333 aa
AA seq
DB search
MNFFRQVRLLLWKNWILRKRQKLRFLVELLWPLSLFLALVWLRKANPPYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFRSPTHGEGPGVVSNYKNSILARVYKDAQELLLETPEIH
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENVGLTDFVVYQ
LINAQVRPEQFAYGVPSLTLKDIACSEVLLDRFIIFSSRRGLPSVHKAMCALSQDSLQRV
EDALYANVDFFKLFRLLPTVLDRNSPGADLKAWGRVLSNVSQAVQKLARKPSVQDLLRVL
QPFLQDGRPESLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSGY
LYDNTTTPFCNALIQNLESNPLTKIAWHAVKPLLMGKILFAPDSPPVREIVKNANFTFEE
LERLQLLTKAWEEVGPQLWYFFQNSLQMNMIRDSLKHPTVRDFLNSQMGAEGFTAEHIIN
FLHNGSSRSREKGMVDFDWRNIFSAVDQVLRLLSQYLECLTLDKFEGYLDETQLTRQALY
LLEENKLWAAVVFSDLEPTASSLPPHVTYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTSTEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVIWCTWFLDSFSMMAVSTFLLTALIM
NGQVLHYSNPLLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIICF
VWQDRLTANLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
NMMVFDAFLYGILSWYLDNVFPGDYGLPQPWYFPVLESYWLGSRSPEAEKTATADEKSPE
SEGCVDQKTTAREKNESNSNKSEEAEKTEEKSDGQGKKDGKNKQCKHKREKEPGEQGKPK
TDVQDKDEININTFFEPEPAGLIPGVCIQNLVKIFANSPKPAVDGINITFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLVGGLDIQTHMDSIRHRLGMCPQHNILFNHLTVAEH
ILFYSQLKGRSREEAEQELETMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRPGRTIILSTHHMDEADILGDRVAIISQGKLFCSGS
PVFLKNCFGSGFYLTLVRKMRTTKMGRSTSFCSCGSQCSCSCSSCVHRGEEGAPELELDG
DLNELAEVIHHHIPEAKLIESIGQELIYLLPNKNFKQRSYASLFRELEETLDDLGLSSFG
VSDTPLEEVFLKVTAEADPEMQKTGDTQENGSALGKTPTENKPAEQTALKMSDTSRMPVG
RTGDQNEGKGSRQYKGFQLVHQQIKALLIKRFHHASRSHKDFLAQVVLPASFVLLSLVLT
AIIPPFGEYPALTLHPWIYGQQFTFFSNERPGNEQMVSLTHAFLNKPGFGIRCMKTQPLS
NYPCNNMPTAWNTPAVHPNLSRLLLSQEWSPENPSPSCKCSTHKKLTMLPECPAGAGGLP
PPQRVQRSTEILQDMTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGRLPVLH
VSGDQIVNFLCDLGRMMNVTGGQTSLAAAKEIPNFLKYMETEDNIKVWFNNKGWHAMVSF
LNVANNAILRANLRTGQDPEEHGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQERVTKAKHLQFVSGVSPVTYWLTNFMWDIVNYALSAGMVVAIFAGFK
KKAYTSPTNLPVLVALLLLYGWAVIPMMYPASSFFSIPSTAYVALSCINLFVGINSSAIT
FILELFENNPSLLKFNRTLKNVLLVLPHFCLGRGLIDLAMSQAVTEVYARFGEEHVSDPF
QWDFVGKNLVAMALQGVVFFFLNLFMHRCLFSTRWFAETAMSPIINEDEDVAEERKRIMN
GGNNTDILQLQELTKIYAGRRKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTD
VTSGDAVVAGNSILTHISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIKRV
AEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLILLDEPTTGMDPQSRRLLW
DSIVGVLRDGRAVVLTSHSMEECEALCTRLAIMVQGTFKCLGTIQELKYKFGDGYIVTLK
IKAPKSGLPPDPAPAEKFIRINFPGSFQREKHYNMLQYQICSSSLAKIFRLIISNKENLH
IEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREARVSPALHQQAAA
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttttaggcaagtcagacttctactctggaagaactggatccttcggaaaaga
caaaagcttcgttttctagtggagcttttatggcctctgtcattgtttcttgcgcttgtc
tggctgaggaaagccaatccgccgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatcagcaggaacgctgccatggttacatggcatcttctgtaacatgaacaatccc
tgtttccgcagcccaacccatggagagggtccaggtgtagtgtccaactacaaaaattcc
atccttgcaagggtatataaagatgctcaggagcttttacttgaaacccctgaaatccat
gaccttggaagaatctgggaagaactgatcattatgactcagtttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaagatggg
gagaccctcacttccttcttgctagaaaatgttggcctcacagattttgttgtttaccag
cttattaatgctcaagtgcgccctgaacagtttgcttatggtgtccctagcttgactctg
aaggacattgcttgcagtgaggtgctcctggaccgctttatcatcttcagcagccgaaga
ggtctcccttctgtacacaaggccatgtgtgccctgtcccaggacagtctacaaagagta
gaagatgccttgtatgcaaatgttgatttcttcaagctatttcggctgcttcccactgtg
ttggacagaaactcaccaggtgctgacctgaaggcctgggggagggtgctgtctaatgtc
tcccaagcagtgcaaaagctggccaggaagccaagtgttcaggaccttttgagggttctg
caaccatttctacaagatggaaggccagaatccttaggccacttggtgagttccctgtcg
gatcttttctgtggctacccagaaggaggtggatccagagtgctttccttcaactggtat
gaagataacaactacaaagctttcctggggattgactcaacaaggaagaaatctggttat
ctttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggcatgctgtgaagcccctgctgatgggaaaaattctcttt
gctcctgattcacctcctgtacgggaaattgtaaaaaatgcaaacttcacttttgaggag
cttgaacgcctccaattgttgaccaaagcttgggaggaagtaggacctcagctgtggtac
ttctttcaaaacagcctgcaaatgaatatgatccgtgactctctgaaacatcctacagtg
agggacttcctgaacagccagatgggtgcagaaggcttcacggcagaacatatcatcaac
tttctgcacaatgggtcttcaaggagccgggagaagggaatggtggactttgactggcgg
aacatattcagcgctgtagaccaggttctgcgtttgctcagtcagtatttggagtgtttg
accttggataaatttgaaggttatcttgatgaaactcagctgactcggcaagccctttat
ctgctggaggaaaacaaattatgggctgctgtggttttttcagacttagaacctacagcc
agcagtctcccaccacatgtgacatacaagatccgaatggacatagatgcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgttgatgat
ttacgttatatctggggaggctttgcatatctccaggacatgattgagcatgggattata
aagacccagaccagcactgaagtgccattgggaatttatctgcagcaaatgccatatccg
tgttttgtggatgatgtcttcatgatcaccttaaaccgcgcctttcccatcttcatggtg
ctagcttggatatattcagtctccatgactgtgaagagtatagtgctggagaaggaaatg
cgtctgaaagaggctatgaagaacaggggcataaccaatggagtgatttggtgcacgtgg
ttcctagacagcttttccatgatggctgtgagcacattcctcctcacagctctgattatg
aatggacaagtgctacattatagcaatccacttctgttctttctattcctcctgacattc
accacagccaccataatgcagtgtttcttgttcagcaccttcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctgccccacatcatctgcttt
gtctggcaagaccgtctgactgctaatctgaagatcctagcaagtttgctttctcaagta
gcttttgggtttggtacagaatacttgtcacgctatgaagagcaaggtcttggcctacag
tggggtaacatcagaaccagtcccttggaaggagatgaatatagttttcttttttccatt
aacatgatggtttttgatgcttttctctatggaatactttcttggtatcttgataatgtt
tttccaggggattatgggttaccacagccttggtatttccctgtgctggaatcctattgg
cttggctccagaagcccagaagctgagaaaacagcaactgctgatgaaaaaagtccagag
tcagaaggttgtgtggatcagaagaccacggcaagggaaaaaaatgaaagcaactcaaat
aaatctgaagaagctgaaaaaacagaagaaaagagtgacggccaggggaagaaggatggt
aaaaacaaacaatgtaaacacaaacgagaaaaagaacccggcgagcaggggaagcctaag
acagatgtccaggacaaagatgaaattaatataaataccttctttgagcctgagccagca
ggattgattccaggagtgtgcattcagaacctggtgaagatttttgcaaacagtcccaaa
ccagcagtagatgggataaatattactttttatgagggtcagatcacagccttccttggt
cacaatggagcaggaaagacaactaccatgtccatactgacaggcctcttccctcccacg
tctggaactgtgctggttggtggcctggacatccagactcacatggattccattcggcac
agattagggatgtgccctcagcacaacatcctgttcaatcaccttactgtagcagagcac
atcttgttttattctcaactgaaaggaagatccagagaagaagctgagcaagagctggaa
acaatgctggaagacatgggcctcacccataaaagaaatgaagaagctcagaatttgtca
ggtggaatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaagtagta
gtcttggatgagcccacttctggagttgatccatattccaggcgatctatctgggatctt
ctgctgaaatatcgcccaggcagaactattatcctgtcaacccatcatatggatgaggca
gacatccttggagacagagtagccatcatatcccaagggaaactcttctgctcaggctct
cctgtattcctaaagaactgttttggctctggcttttatctcacccttgttcgcaaaatg
agaaccacaaaaatgggaaggtctacatcattttgtagctgtggatctcagtgctcctgc
tcctgctccagctgtgtgcacaggggtgaagaaggagctccagagttggaactggatgga
gatctaaatgagctagcagaagtaatccaccatcatatcccagaagctaaattaattgaa
agcattggtcaggaactcatttatcttttgcccaataaaaactttaaacaacgatcttat
gccagtctcttcagagagctggaagaaacactggatgacctgggactcagcagttttgga
gtttcagacacaccacttgaagaggttttcttaaaggtcacagcagaagctgaccctgaa
atgcaaaaaacaggagatactcaagaaaatggttctgctcttggcaaaactcctactgag
aacaaaccagctgaacaaacggccctgaaaatgagcgacacttctcgaatgccagtaggc
agaacaggagatcaaaatgaaggcaaggggtcccgacagtataaaggctttcagcttgta
catcagcagatcaaagcactgctcatcaaacgcttccaccacgcctcccgcagccacaag
gacttcctagcacaggttgttctccctgctagttttgtgttgctgtctctagtacttaca
gccattattcctccatttggagaatatcctgccttaacattacacccgtggatctatgga
cagcagtttactttcttcagcaatgaacgtcctggcaatgagcagatggtctcccttact
catgctttcttgaataaaccaggatttggaattcgctgtatgaagactcagcctctttcg
aactacccgtgcaataacatgccaactgcctggaacacgcctgctgtccatcctaaccta
agccgcctcctgctgagccaagagtggagccccgaaaatccatcaccttcctgcaagtgc
agcactcacaagaaactcactatgctgccagaatgccctgcaggtgcaggaggcctccca
ccaccacagagagtgcaacgcagcacagaaattcttcaagatatgacccacagaaatatt
tcagattttctggtgaaaacatatcccactttgataaaaggaagcttgaagagtaaatac
tgggtcaatgagcagagatatggaggaatctctataggaggaaggcttccagtccttcat
gtttctggagatcaaattgtcaattttttatgtgatcttggccgaatgatgaatgtgaca
ggaggacaaacttcactggctgctgctaaagaaatccctaatttccttaaatacatggaa
actgaagataatattaaggtgtggtttaacaacaaaggctggcatgctatggttagtttc
ctcaatgtagcaaataatgcaatcctcagagctaatctaaggactggccaagaccctgag
gaacatgggatcactgctataaaccatcctctgaacctcaccaaggagcaactgtctgaa
gtcactgtactgaccacttcagtggatgctgttgttgccatctgtgtgatttttgccatg
tcctttataccagccagttttgttttatacctcatccaagaacgtgtaacaaaagccaaa
catctccagtttgtcagtggtgtgagccctgttacctattggctaactaacttcatgtgg
gacatagtgaattatgcactgagtgctgggatggttgtggctatatttgctggattcaag
aagaaagcatacacctccccgaccaatcttcctgtgctcgttgccttgctgctcctctat
ggatgggcagtaattcccatgatgtaccctgcttcttctttcttcagtatccccagcact
gcttatgttgcattgtcttgtattaatctctttgtgggaatcaacagcagtgccattaca
ttcatcctggaattatttgaaaataatccgtctttgctgaagtttaatagaacattgaaa
aatgtactgcttgtcctcccacatttttgtttgggccgtggactcatcgacttggccatg
agccaagctgtgactgaagtatatgcgaggtttggtgaggagcatgtttctgatcccttt
cagtgggactttgttggaaagaacctggttgccatggctcttcaaggagttgtgttcttc
tttctgaatctctttatgcaccgctgtttgttctccacaagatggtttgctgagactgcc
atgtcacctatcattaatgaagatgaggatgttgcagaagaaagaaaaagaattatgaat
ggaggaaacaacacagatatcttacaattacaagaattgaccaagatttatgcaggtcga
cgtaagcctgcagtggacagactctgtgttggcatccgtcccggagagtgctttggcctt
ttgggagtgaacggtgctggcaaaacaacaacattcaaaatgctgactggagatactgat
gtgacatctggagatgctgtagtggctggcaatagtatactgacccacatttctgatgtc
catcaaaacatgggatactgccctcagtttgatgccattgatgacctgctcacaggacga
gaacacctgtatttatatgcacgcttacggggggttccagcagaagaaatcaagagggtt
gctgaatggggcatccagaagctgggacttcctatgtacgcagaccacctggcagggacc
tacagtggtggcaacaagcgcaagctctccactgccattgccctgataggctgcccacca
ctcatcttgctagatgaaccgactactgggatggaccctcagtcccggcgcctcctgtgg
gactctattgttggtgtgctcagagatgggcgagcggtggttctaacctcacacagtatg
gaagaatgtgaagccctctgtactcgtttagccatcatggtacaaggtaccttcaaatgc
ctaggcacaattcaggagctaaaatacaagtttggagatggctatattgtcactctgaaa
atcaaagctccaaagtctgggctgcctccagatcctgctcctgctgagaaattcatacgc
atcaacttcccagggagtttccagagagagaaacactacaacatgctgcagtatcagatt
tgctcttcctctttggctaagattttccgattaataatctccaataaggaaaatttgcat
attgaagaatattctgtgtctcaaacaacattagatcaggtttttgtgaactttgctaaa
cagcagatggaggatgaggaaattcctttgcatccgcgtgcagctggagccagccgagaa
gccagagtgtccccagctctccatcagcaggcagctgcatag
DBGET
integrated database retrieval system
