Pyrgilauda ruficollis (rufous-necked snowfinch): 121362005
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Entry
121362005 CDS
T07608
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pruf03032
]
121362005 (PIF1)
03029 Mitochondrial biogenesis [BR:
pruf03029
]
121362005 (PIF1)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121362005 (PIF1)
DNA replication proteins [BR:
pruf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121362005 (PIF1)
Mitochondrial biogenesis [BR:
pruf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
121362005 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
UvrD_C_2
Herpes_Helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
121362005
NCBI-ProteinID:
XP_041339107
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MEAAELRCTAAVEQPLPGGLAPRRRVLRNATVLLGRNELRQPVLRVAGGSGATAAVLSFV
LAGDAVRLFTRFAGEGRAAVRVGPDGAQVLLSDCPPDALRRFLRLLRLKVAVGSRDAPRR
PRLLERPPPAFSVISPVQERDLLCGPGRRRPGEERGERPAEVPRAERRPPARLSAEQEAV
LGAVRSGKSIFFTGSAGEGSRRLLGTGKSFLLKRIVGSLPPNITYATASTGVAACHIGGT
TLHAFAGIGSGKAPLEQCIQLAERPGVRQHWLACRHLIIDEISMVDGKFFDKLEAVARAV
RKRDEPFGGIQLIICGDFLQLPPVCKANEETKFCFQAKSWRKCIHINMELTEVRRQTDKT
FVSLLSEIRLGRCTEEVTRQLMQTAAHKSERDGILATRLCTHKDDVEITNERRLQHLPGE
VHVFEALDSDPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFES
EQKGLPKVRFLCGVTQLIKMEKWVIKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVE
ISLSRVFESGQAYVALSRARSLAGLRVLDFDPKAVRADPAVLQFYRQLRRHQLLAQDSLH
TYSDADEKENWKCK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggagctgcgctgcacggcggccgtggagcagccgctgccggggggactc
gccccgcgccgccgcgtattgcggaacgcgaccgtgctgctgggccgcaacgagctgcgg
cagcccgtgctgcgggtggccggcggcagcggcgcgacggcggcggtgctgagcttcgtg
ctggccggtgacgccgtgcggctcttcacgcggttcgcgggcgaggggcgggcggcggtg
cgggtggggccggacggcgcccaggtgctgctgtccgactgccccccggacgcgctgcgc
cgcttcctccgcctcctgcgcctcaaggtggccgtcgggtcgcgggacgcgccgcgccgc
ccccgcctgctggagcggccgccgccggccttctccgtcatcagcccggtgcaggagcgg
gacctgctgtgcggccccggccgccgccgccccggcgaagagcggggggagcgcccggcg
gaggtgccccgtgcggagaggcggcccccggcgaggctctcggcggagcaggaggcggtg
ctgggcgccgtgcggagcgggaagagcatcttcttcaccggctctgcaggtgaggggtcc
cggcgactcctagggactgggaagtcgttcctgctgaagaggatcgtgggctccctccct
ccgaacatcacctacgccacagccagcacgggagtggcggcttgtcacatcggtggcact
actctccacgcctttgcaggcatcggctctgggaaggcacccctggaacagtgcattcag
ctggcagagaggccaggggtgcgccagcattggctcgcctgccggcacttaattattgat
gagatctcaatggtggatggcaagttcttcgacaagctggaagcagtggcaagggctgtc
agaaaacgggatgagccttttggaggaattcagctaattatctgtggggatttcttacag
ctacccccagtctgcaaggctaatgaagaaaccaaattctgcttccaggcaaaaagctgg
aggaaatgcatccacataaacatggagctgactgaagtgcggagacagactgacaagacc
tttgtctcactcctgagtgaaatccgtttaggcaggtgcacagaggaggtcaccagacag
ctgatgcagacagctgctcacaagtctgagcgtgatgggatcctggctacgaggctgtgc
acccataaagatgatgtagaaataaccaatgagagacgcttgcaacaccttccaggagaa
gtgcatgtgtttgaggctttggacagtgacccaatgctagtgaagttaattgatgctcag
tgtcctgtgggtggtagagttgagctaaagcttggagctcaggtgatgttagcaaagaat
ctggatgtgtctcaagggctggtgaatggggcacgaggtgttgttgtagggtttgaaagt
gaacagaaggggttgcctaaggtgaggtttctctgtggggtcacacagctcataaaaatg
gagaaatgggtcatcaaaggaccatcaggagttcatctgagtcgccagcaattaccttta
aaattggcatgggccatttccattcacaagagtcagggcatgtctttggactgtgtggag
atctccctgtctcgtgtctttgaaagtgggcaggcctatgtagctctctcccgagcccga
agccttgcaggtctccgtgttctggattttgacccaaaggcagtgagagctgatcctgct
gtgctgcagttctacagacagctgaggcgtcaccagcttctagcccaggattcactacac
acctattcagatgctgatgagaaggagaactggaaatgcaagtga
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