Pyrgilauda ruficollis (rufous-necked snowfinch): 121362042
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Entry
121362042 CDS
T07608
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121362042 (FUBP1)
03041 Spliceosome [BR:
pruf03041
]
121362042 (FUBP1)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121362042 (FUBP1)
Spliceosome [BR:
pruf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121362042 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
121362042
NCBI-ProteinID:
XP_041339164
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MADYSTVPPPAAGAPGGGGGGAGGVNDAFKDALQRARQIAAKIGGDAGTAMNSNDYGYGG
QKRPLEDGDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQI
SRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGP
GNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYK
VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQN
DAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGR
GQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPN
MKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGPPGPPGPGAPMG
PYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSAAWAAYYA
HYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQAVPAPAG
APPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKKQQTFNH
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgccccctcctgccgcgggcgcgcccgggggaggtggcggc
ggggctggaggagtgaacgatgcctttaaagacgcgctgcagagggctaggcagattgca
gcgaaaattggaggagatgctggcacagcaatgaattcaaacgactacggttatggaggg
cagaaaagacctcttgaggatggagatcaaccagatgctaagaaagttgctccccagaat
gactcttttggaaatcagctaccaccgatgcatcagcaacaaaggtctgtgatgacagag
gagtacaaagttccagatgggatggttggattcataattggcagaggtggagagcagatc
tcacgcatacagcaagagtctggctgtaaaatacagattgcacctgatagtggaggcctg
cctgaaagatcatgtatgctgactggaacaccagagtctgttcagtcagcaaaaagattg
cttgatcagatagttgaaaagggaagacctgcacctggatttcatcatggtgatggacct
ggaaatgcagtccaagaaattatgattccagcaagtaaagcaggattagttattgggaaa
ggtggagagacaattaaacaattacaggagcgggcaggtgtcaaaatggtcatgatccaa
gatggtccacagaacactggtgcagacaagccccttaggataactggagacccttataaa
gttcagcaagccaaggaaatggtgctggagttaattcgtgatcaaggtggctttagagag
gtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgttccaatacca
cgatttgctgtaggtattgtaattggaagaaatggagagatgattaaaaagatccagaat
gatgctggtgttaggatccagttcaagccagatgatggaacaactccagatagaatagcc
cagatcacagggcctcctgacagatgtcagcatgctgcagaaattattaccgatctcctt
cgcagtgttcaggctggtaaccctggtggaccaggacctggtggtcgaggaaggggtaga
ggccaaggcaactggaacatggggcctcctggtggattacaggagttcaattttattgtc
cctactggcaaaactggattaatcattggaaaaggtggtgaaactattaaaagtataagc
caacagtctggtgctagaatagaacttcagagaaatcctccacctaatgcagatccaaac
atgaagatgtttactatccgtggaacaccccagcaaatagattatgcacgacaacttata
gaagaaaagattggaggtccagtgaatccattgggtccacctgttccccatggtccccat
ggtgttgttcctggcccgcatggacctcctgggccaccaggtcctggtgctcctatggga
ccatataatccagctccttataacccaggccctcctggtcctgcacctcatggtcctcca
gctccatatgctccacagggatggggaaatgcttatccacactggcagccaccaaaccca
ccagacccaggtaagccaggaacagatcccaattcagcagcgtgggcagcttattatgct
cactattatcagcagcaagcacagccaccacctgcagcccctcctggtggaccagctaca
acccaaaccaatggacaaggagatcagccaaatccagcaccagcagggcaggttgattat
accaaggcctgggaggagtactacaaaaaaatgggtcaagctgttcctgcccctgctggg
gctcctccgggcgggcagccagattacagcgcagcgtgggctgagtactacaggcagcag
gcagcgtactacgctcagacaagtccacagggaatgccacagcatcctccagcaccacag
tgccttcccagaccttccaccttaggttctgctgcaaaaaagcaacagacatttaatcat
cactga
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