Pyrgilauda ruficollis (rufous-necked snowfinch): 121362084
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Entry
121362084 CDS
T07608
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04136
Autophagy - other
pruf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121362084 (ATG4C)
04136 Autophagy - other
121362084 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pruf01002
]
121362084 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121362084 (ATG4C)
03029 Mitochondrial biogenesis [BR:
pruf03029
]
121362084 (ATG4C)
Peptidases and inhibitors [BR:
pruf01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
121362084 (ATG4C)
Membrane trafficking [BR:
pruf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121362084 (ATG4C)
Mitochondrial biogenesis [BR:
pruf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121362084 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
121362084
NCBI-ProteinID:
XP_041339233
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTEESGELST
DGSNFDKISTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLMLHFLGRAWVWPEALDMDSCDSESWTSSTVRKLTASFEASLTAERDPRVLARPPAS
RDWDVTQRRNEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKMAGDWYGPAVVAHILRK
AVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSLVDSGKAGTKAVIILVPVRLGGERTN
TDYLEFVKGILSLEYCVGIIGGRPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE
SFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVKGHS
RDYDFTSSPLHEENDLFSEDEKKRLKRFSTEEFVLL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacggggacagatgaagtagaaaagatcaaatcaaagtttatgtctgcatgg
cacaacatgaaatacagctgggtgttgaaaacaaaaacttacttcagtaggaactctcca
gtctttctgctgggaaaatgttaccacttcaaaactgaggaatccggggagctctctaca
gatgggtccaattttgacaaaatcagcactgagatttcggggaacgtcgaggagttccgc
aaagatttcatttctaggatctggctgacctacagagaggaattccctcagatcaagggc
tctgctttaaccacagactgtggctggggctgcacgctcagaacggggcagatgctgctg
gctcaggggctgatgctccatttccttgggagagcctgggtgtggccagaagccctggac
atggacagctgtgactcggagtcctggaccagcagcaccgtgaggaagctcacggcctcc
ttcgaggcgtcgctcacggccgagagggaccccagggtcctggcccggccccccgccagc
agggactgggatgtcacccagaggaggaatgaggtttatcacaggaaaatcatctcctgg
tttggtgactcccccctggcagcctttgggctgcaccagctgatagagtatgggaagaag
tccgggaagatggcgggggattggtacgggcccgccgtggtcgcacacattttgagaaaa
gctgttgaagaagcaagagaccctgagctgcaaggagtaacagtctacgttgcccaggat
tgtacagtctacagctcggatgttattgacaggcagtgctctcttgtggattctgggaaa
gcaggcacaaaagctgtaattatattggttcctgtgagactcggtggagagagaacaaac
acagactacctggagtttgtaaagggaattttaagcctggagtactgtgttggcatcatt
ggtggcagaccaaagcaatcctattactttgctggattccaagatgacagtttgatttac
atggatcctcattactgccaatcttttgtagatgtcagcataaaggatttccctcttgag
tcattccactgtccttctcccaaaaagatgtccttcaaaaaaatggacccgagctgcacg
atagggttttactgtaggaccgtgcaggactttgagaaggcttctgaagaaatcaccaag
atgctgaaatcttcatccaaggagaaatatcccctgtttacttttgtcaagggtcattct
agagactatgactttacttccagtccactccatgaagaaaatgaccttttctccgaggat
gagaagaaaagactgaagagatttagtacagaggagtttgtcttgctttaa
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