Pyrgilauda ruficollis (rufous-necked snowfinch): 121362388
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Entry
121362388 CDS
T07608
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121362388 (GAPVD1)
Membrane trafficking [BR:
pruf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121362388 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
SPO24
Motif
Other DBs
NCBI-GeneID:
121362388
NCBI-ProteinID:
XP_041339786
LinkDB
All DBs
Position
Unknown
AA seq
1486 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRNPP
GQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMLMDQHGDHEGSSQETIPEVQPEE
VLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQ
LTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPS
FGSHALIPTDLEAFKQRHSYPERLVRSRSSDIVPSVRRPMSDPGWNRRAGNEDRELPMAS
GSAGAAVLASQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFR
KKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYD
SAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCSAD
SVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFD
NRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTV
CVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQD
AQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREA
PWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIK
ANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacatccacacgctggcccaccacctgaagcaggagcggctgtacgtg
agctcggagaagcagctgatccagcggctcaacgccgacgtgctgaagacggcggagcgg
ctctaccgcacggcctggatctccaaacagcagcgcatcaacctcgacaggctcatcatc
accagtgctgaagcttctcctgctgaatgttgccagcacgcaaaaatcttggaggacacg
cagtttgtggatgggtacaagcagctgggattccaggagactgcttatggagaattcctg
aacagactgagagagaaccccaggcttattgcgtcctgcctggtggctggcgagaagctc
aaccaggacaacacccagagtgtcatccacacggtcttcacctccatctatggcaactgc
atcatgcaggaggacgagagttacctgctgcaggtgctgcggtacctgattgagtttgaa
ctgaaggaaagcgacaaccccaggcggctgctgagacgaggcacctgtgccttcagcatc
ttgttcaagctcttctctgaaggactcttttctgcaaaactttttcttactgctacctta
catgagccaatcatgcagcttctggttgaggacgaagaccacctggaaaccgatgcgaac
aagttaattgagagattctccccagtacagcaggaaaagttatttggagagaaaggcaca
gaaaagttcaagcagagggtccaagagatggttgactccaacgaggccaagctggtgacc
ctggtgaacaaattcattggctatctcaaacaaaacacgtactgctttcctcacagcttg
aggtggattgtgtcgcagatgtacaagacgctgtcgtgcgtggacaggctggaggttggc
gaggtcagagccatgtgcacagatctccttctggcctgtttcatctgccctgccatcgtc
aaccccgagcagtacggcatcatctctgatgctcctatcaacgaggtggcaagatttaat
ctgatgcaggttgggagacttctgcagcagctggcaatgacaggctctgaggagggagat
ccacgtacaaagagcaacctcgctaaatttgacaaaagctgtgtcgctgctttcctggac
gtggtgatcgacgggcgcgcggtggagactcccccgatgtcggccgtgaacctgctggag
gggctgagccgcaccgtggtgtacatgacctacagccagctcactgccctggtgggcttc
atgcggaacgtgatgtcaagcgatcagcttaaggaagatcggatggctttggaaaacttg
ctggcgaatttaccccagaacaagccagggaaaagcagcagccttgaaatgactccgtac
aacaccccccagctttctcctgcaaccactccagccaacaaaaagaaccgaaaccctcca
ggacagcagctggcagcgattactgcctgggacacctctgctaccaatctgtcagctcac
ataactctagtaaccccttttgccactcgaagcagaagtagatcaaacatgctgatggac
cagcacggagatcatgaaggatcctcccaggagactattccagaagtgcagccagaagaa
gtgctggtgatttctttggggacaggtccacagattactccaggaatgatgtcagaaaat
gaggtgttaaatatgcagcttgcagatggtgggcagggagatgtccccattgatgagaac
aagctccatggtaaacctgataaaaccctgcgcttttccctctgcagtgacaatctggaa
ggaatatctgaaggcccttccaatcgctccaactccgtgtcctccctggacctggagggg
gagtcggtgtcggagctgggcgcgggcccctccggcagcaacggcgtggaggctctgcag
ctgctggagcacgagcaagccacaactcaggataacctggatgacaagctccgtaagttt
gaaatccgtgacatgatgggtttgactgatgacagagacatctcagagactgtcagtgaa
acctggagcacagatgtcttgggaagtgacttcgaccccaacatcgacgaggaccggctg
caggagatcgcaggtgcagctgcagagaacatgctaggcagcttgctgtgtttgccaggt
tcaggatccgtgttgcttgatccctgcacaggttcaaccatatcagaaaccacaagtgag
gcgtggagtgtggaagtattaccaagtgattcagaggctccagatttaaaacaggaggaa
agactgcaagagctggagagctgctctgggctgggcagcacgtctgatgacacagatgtg
agggaggtcagctctcggcccagcacgcccggcctgagcgttgtgtcaggtattagtgca
acatctgaagatattcctaacaagattgaggatctcaggtctgaatgtagctctgacttt
gggggcaaagattctgtgacaagtcctgacatggatgaaacagcccatggagccagtcag
ttgacatctcctccttctcaaacagattctttgcttgcattgtttgaccctctgtcctca
aatgagggtgtgtcagctgtagtgaggcctaaagtgcactatgcaagaccctctcaccca
cctccagatccccccatcctggaaggagccgtgggaggtaacgaggcgcgactgccgagc
tttgggtcccacgctctgatcccgacagacctggaagccttcaagcagaggcactcctac
ccggagaggctggtccgcagcaggagctcggacatagtgccctcggtgcggaggcccatg
agtgatcctggctggaacagacgtgctgggaacgaggacagggagctgcccatggcctcc
ggcagcgccggggcagccgtgctggcctctcagtcgtcgtcttcatctcccagcaaggac
tcctccaggggagagattgaggaacggaaagacagtgatgatgagaagtctgacaggaac
aagccctggtggaggaaacgttttgtgtctgccatgcccaaagctcctattccatttagg
aagaaagaaaaacaagaaaaagacaaagatgacatggtgcctgacagatacgcaacgctt
caagatgatcccagcccgaggctcagtgcacaggcacaagctgctgaggacattctggac
aaatacaggaatgcaatcaagagaacgagtcccagtgaaggagccatcgtgaactacgac
agtgcagaggcaattggggatggtgagagcatgcacgactccccacgggatgaggctttg
cagaacatgtctgcagatgacctcccagactctgcaagtcaagtagcacagccacaaggt
tctgctttctcctacagggatgcaaagaagaaattgagattggctctttgttcagcagat
tctgtcgccctcccgatgctgacacactcaacaaggaatggtctcccagaccacacagac
cctgaagataatgaaattgtgtgcttcttgaaagttcagctggctgaagccatcaacctg
caggacaagaacctgatggcgcagctgcaggagacgatgcgctgcgtcagccgcttcgac
aaccgcacgtgccgcaagctgctggcctccatcgcggaggactacaggaaaagagctccg
tatatcgcgtacttaacgcgctgtcgccaaggcctgcagacgacacaggcgcacctggag
aggctcctgcagagagtcctgcgagataaagaagtggccaacagatacttcactacagtc
tgtgtgaggttactgctggagagcaaggaaaagaaaataagggagttcattcaagatttc
cagaaactcacggcagccgatgataaaacggcccaagtggaggattttctgcagttcctg
tacggggccatggctcaggatgccatctggcagaacgccagcgaggagcagctccaggac
gcgcagctggccatagagcgcagcgtgatgaatcgcattttcaaactcgccttctacccc
aaccaggacggggatattttgcgtgaccaggtccttcacgagcacatacagaggttatcc
aaagtagtgactgcaaaccacaaagcactgcagatacctgaggtgtatctgcgggaggcg
ccgtggccgtcggcgcagtccgagatccgcaccatcagcgcttacaaaaccccccgggac
aaggtgcagtgcatcctgaggatgtgctccaccatcatgaacctgctcagcctggccaac
gaggattcggtacctggggcagatgattttgttcctgttctggtctttgtcctcataaag
gcaaaccccccttgcctgctgtccactgtgcagtacatcagcagtttctatgccaactgt
ttgtctggagaggagtcgtactggtggatgcagttcacggcagccgtggagttcatcaaa
accatcgacgaccgcaagtag
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