Pyrgilauda ruficollis (rufous-necked snowfinch): 121362568
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Entry
121362568 CDS
T07608
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121362568 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pruf01007
]
121362568 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pruf03016
]
121362568 (KARS1)
Enzymes [BR:
pruf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
121362568 (KARS1)
Amino acid related enzymes [BR:
pruf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
121362568 (KARS1)
Transfer RNA biogenesis [BR:
pruf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121362568 (KARS1)
Prokaryotic type
Other AARSs
121362568 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
121362568
NCBI-ProteinID:
XP_041340106
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MLSSGAARLRSWVWRAAPALRRQQALHDQSSELKRRLKAERKTAEKEAKQKEQSEKHSNK
PSLTSEDNVATDEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDLSLSDFIEKYNHL
QPGDHLTNITLRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYFRVNSK
LRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLI
LNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLY
MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITE
KLLSGMVKHITGGYKITYHPDGQDGQAYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFE
TEETRRFFDNLCVERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKW
HRSLPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCT
ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDSKKEAQPVEGTSV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctccggcgctgcgcggctccgcagctgggtctggagggccgcgcccgcgctc
cgacggcagcaggcgcttcatgaccaaagcagtgagctgaagagacgtttaaaggctgag
cgaaaaacagctgaaaaagaagcaaagcagaaagagcaaagtgaaaagcattcaaataag
ccttccttgacttctgaggataatgttgctactgatgaggagagcttggatccaaatcaa
tactacaagatccgtagtcatgcagtccaacagcttaagggctccagtgaagatccctat
ccccacaagttccacgttgacttatctctctcagattttatagagaagtacaatcatctg
cagccaggggatcacctgacaaatattaccttgagagtggcaggtcgaatccatgcaaag
cgtgctgctggagggaaactgattttctatgatcttcgtggtgaaggagtcaagctgcag
gtcatggcaaattccagcctctacaaatccgaggaagaatatttccgtgttaacagcaag
ctgcgtcgtggagacattattggtgtagaggggaatcctgggaaaacaaggaaaggggaa
ctgagtattattccttatgaaatcactctcttgtctccatgcctgcacatgttgcctcat
cttcattttggcctcaaagataaggaaaccagatatcgtcagagatacttggatttaatt
cttaatgattatgtgaggcagaaatttataacccgtgcaaagatcatcacttatcttcgt
agctttctggatgaattgggctttcttgaggttgaaactcctatgatgaatgtaattcca
ggcggagctgtggcaaagccatttatcacataccacaatgaactggatatgaatttgtat
atgagaattgctccagaactttaccataagatgttggtggttggtggtctggacagagta
tatgaaattgggcgtcagttccggaatgaaggaattgatttgactcacaaccctgagttc
acaacttgtgaattttatatggcttacgcagactaccatgacttaatggaaattacagag
aagttgctttcagggatggtgaaacatattactgggggttacaagatcacttaccatcca
gatggtcaagatggacaggcttacgagatagattttactcctcccttccggcgaattagc
atggtgtatgatctggaaaaggtcctgggagtgaagtttccatcaactgaatgttttgaa
actgaagaaactcgcaggttctttgataacctttgtgtggagagaaatgttgaatgtcca
cctcccaggacaacagccaggcttcttgacaaattagttggagaattcctggaagttacc
tgtatcaaccctacattcatctgtgatcacccacaggtcatgagtccacttgccaaatgg
catcgctctcttccaggactaacagaacgctttgaactcttcgtaatgaagaaggaagtg
tgcaatgcctacacagaactcaatgatccgttccgacagcgtcagctttttgaagatcag
gccaaggcaaaagctgcaggtgatgatgaagccatgtttattgatgaaaacttctgcacc
gcactggagtatggtcttcctcctacagctggctggggcatgggaattgatcgcttgacc
atgttccttacagattccaataacatcaaggaggtgctgctcttccccgccatgaaaccg
gaggacagcaagaaagaggcgcagcccgtcgagggcacctctgtgtga
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