Pyrgilauda ruficollis (rufous-necked snowfinch): 121362633
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Entry
121362633 CDS
T07608
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121362633 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121362633 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121362633 (PDLIM5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
121362633
NCBI-ProteinID:
XP_041340217
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNVPLSISRLNDGGKAAQAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVSSIQKPDHFHVTKAEPTEVVKPVPIASAVAPKVTAT
ASVAFNKTPRPFGAVTSSKVTSIPSPSSAFTPAQASAASPCAVPGVHANAKPNAEPWPPV
PGAPKPAVPVPRQHGAAPSASAADGAQDAAEGPRRGGRENQGESKQQNGKNPPKRPPRKH
IVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPENEA
GKKTNDSLEAAQPAPVRSIPACQDNVDVRPAPANSSPAAVLKPAAPLGSAKGWQPPNQAA
PLSGWTSNSIKSPGTTAPSEKAATTPQLNEQDTLVQRAEHIPAGKRTPMCAHCNQVIRGP
FLVALGKSWHPEEFNCAHCKTSMAYIGFVEEKGMLYCEVCYEKFFAPECSKCQRKILGEV
INALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFPIEAGDR
FLEALGHTWHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtcgggccggctccctggggtttcaggcttcaaggg
ggcaaggatttcaatgtgcctctgtctatctctcgacttaatgatggtggcaaggcagcc
caagcacacgtggggattggtgatgtggttctcaccattgatgggataagcacggatggg
atgactcatctagaagcacaaaacaagatcaaggcatgtacaggcaatttgaacatgact
ctgcaaagagtgtcttctatacaaaaacctgatcattttcatgtgacaaaggcagagcct
accgaagtagttaagcctgtgcccattgcctctgctgttgcacccaaagtcactgccaca
gccagcgtggctttcaataagacaccgaggccgtttggagctgtaacctcctccaaggtc
acctccatcccatcaccgtcctccgccttcacgccggcgcaggcgtcggccgcatccccg
tgtgctgtgcccggagtgcatgctaacgccaagcctaacgctgagccgtggccgcctgtg
ccgggcgctcctaaacctgcagttcctgtcccacggcagcacggtgccgccccgagcgcc
tcggccgccgacggcgcccaggacgcagccgaggggccgcgacgaggaggcagagagaac
cagggggagagtaaacagcaaaatgggaaaaacccacccaaacgccccccgcggaagcac
atcgtggacacctacacggagttctaccacacgcccacccacagcgacgccagcaagaag
cggctgatcgaggacaccgaggactggcacccgcgcacgggcaccacccagtcccgctcc
ttccgcatcctcgcccaaatcactggcacggatcacatgaaagaaccagaaaatgaagct
gggaagaagactaatgattccctggaagctgcccagcctgccccggtgaggagcatccct
gcctgccaggacaacgtggatgtgagacctgctcctgccaactcctcacctgccgcagtc
ctcaagccagcggcacccctgggttctgccaagggctggcagcctccaaaccaagcagct
cctctcagtggatggacatcaaacagtattaagtcacctggaacaactgccccgagtgaa
aaagctgcaacaacacctcagctaaatgagcaagacacgttggttcagcgagcggagcat
attccagcggggaagcgcactcccatgtgtgcacactgtaaccaggtcatcagaggaccc
ttcttggtggctttgggaaagtcatggcatccagaggagtttaattgtgcccactgcaaa
acctccatggcgtacataggatttgtggaagagaaagggatgctatattgtgaggtctgc
tatgagaagttctttgcccctgagtgttcaaagtgccagaggaagatccttggggaagta
ataaatgctttgaaacaaacttggcacgtttcctgcttcgtgtgtgtggcctgtcataac
cccatccgcaataatgtttttcacttagaagatggtgatccctactgtgagacggattac
tatgccctctttggtacaatgtgccacggctgtgaattccccattgaagctggagacagg
tttcttgaagccctgggccacacttggcatgacacctgctttgtatgctccgtatgtagt
gacagtttggagggccagactttcttctccaagaaggacaagccactgtgcaagaaacac
gcccactctatcaacatctga
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