Pyrgilauda ruficollis (rufous-necked snowfinch): 121362640
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Entry
121362640 CDS
T07608
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04010
MAPK signaling pathway
pruf04210
Apoptosis
pruf04218
Cellular senescence
pruf04620
Toll-like receptor signaling pathway
pruf04621
NOD-like receptor signaling pathway
pruf04622
RIG-I-like receptor signaling pathway
pruf04623
Cytosolic DNA-sensing pathway
pruf04625
C-type lectin receptor signaling pathway
pruf04920
Adipocytokine signaling pathway
pruf05132
Salmonella infection
pruf05164
Influenza A
pruf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121362640 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121362640 (NFKB1)
04218 Cellular senescence
121362640 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121362640 (NFKB1)
04621 NOD-like receptor signaling pathway
121362640 (NFKB1)
04622 RIG-I-like receptor signaling pathway
121362640 (NFKB1)
04623 Cytosolic DNA-sensing pathway
121362640 (NFKB1)
04625 C-type lectin receptor signaling pathway
121362640 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
121362640 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121362640 (NFKB1)
05168 Herpes simplex virus 1 infection
121362640 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
121362640 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121362640 (NFKB1)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
121362640 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Death
Ank_5
Motif
Other DBs
NCBI-GeneID:
121362640
NCBI-ProteinID:
XP_041340237
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAAEDSYIMGVSDPQMFAVDQFMGMNALFNSTNYITADLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVLAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
SYLQAEGCEDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGLWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGGAGSGFSFPSYGYSAFGGMHFPGT
TKSNAGMKHEGLSNCTAEQDRKSCDKQNDQWDTKCDVKVEAVESAECRMSPAHKKKEDSG
FSCKAEGSKADCRWQDALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQDDN
GDNVLHLAIIHLHTELVKDLLEVMPSLNYNDIINMRNDLYQTPLHLAVITKQAKVVEDLL
KAGADVSLLDRHGNSVLHLAATEGDDKILSLLLTHEKVSPMVNLPNAEGLSAIHLVVMAN
SMSCLKQLIAAGVNINAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDYVKDDEDDDEGIVPGTTPLDMAANS
EVYDILNGKPYESAEVLEDLLTQGHLRELNENSKMQLYKLLELPDPTKNWSTLAQKLGLG
ILNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDHTEAIEIIQEALSISRRPSPLE
DSTAKALPLSSPLTFANGETGEVYNSRFQDPESTCDSGVETSFRKLSFTYSDSLSSKSSL
TLGKMALGYGHESSGQSNYIAD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagattcctatattatgggagtatctgatccccaaatgtttgcggtggat
cagttcatgggaatgaatgctttatttaacagtacaaattacatcactgcagacttacca
ctacgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagaggggattt
cgtttccgatacgtatgtgaagggccttcgcacggtggacttcctggtgcttctagtgaa
aagaacaaaaaatcctaccctcaggtcaaaatctgcaattatgttggacctgcaaaagta
attgtgcagttagtaacgaatgggaaatacgtccacttacacgctcacagcttggtgggt
aaattctgcgaggacggggtgtgcacggttctcgcaggacccaaggacatggttgtaggg
tttgcaaatcttggaatacttcatgtcacgaagaagaaagtgtttgaaactctggaaaca
cgcatgatagatgcttgcaagaagggatacaacccaggactcctggtgcatccagaactc
agctatctgcaggcagaaggatgtgaagacaggcagctaactgagcgggaaagagaaatc
atccgccaggcagccattcagcagaccaaggagatggatctgagcgtggtgcggctcatg
ttcacagccttccttcccgacagcaacggcagcttcacacgcaagcttgatcccgttata
tcagatgcaatatatgacagcaaagctcccaatgcatccaacctaaaaatcgtaagaatg
gacagaacagcagggtgtgtgacaggaggggaagagatttacctgctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaggatgagaatggtggtctgtgggaa
ggctttggagacttttctcctacagatgtacatagacagtttgctattgtgttcaaaaca
cccaagtaccgagacgtgaatatcacaaagccagcatctgtatttgtacaactgcgtcgg
aaatctgatctagaaacaagcgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcaaaggaaacgacagaagctcatgccgaacttctctgatggctatggt
ggcggcagcggcaccggaggtggtggcatgtatggaggggcaggtggtggtgctggctct
gggttcagttttccttcatatggatactctgcttttggagggatgcatttccctggcaca
acaaagtccaatgctggcatgaaacatgaaggtctatcaaattgcacagctgaacaagac
agaaagagctgtgataaacaaaatgaccaatgggacacgaaatgtgatgtgaaggtggaa
gcggtggagagcgctgagtgcagaatgtctcctgctcacaagaaaaaggaggattctggt
ttttcctgtaaggctgaaggaagcaaagcagattgcaggtggcaggatgctctgttcctg
gagaaggccatgcagcttgccaggcgccactgcaacgccctcttcgattacgccgtcact
ggagacgtgaagatgctgctggcggctcagcgccatctcaccgctgtccaggatgataat
ggggacaatgtccttcatttagcaattatccaccttcataccgagctggtgaaagacctc
ttggaagtgatgcccagtttgaattacaatgacatcattaacatgagaaatgacctctat
cagacccctctgcacctggcagtaatcacaaagcaggcaaaggtggtggaagacttgctg
aaggctggagcagatgtcagccttctggatcgccacggcaattctgtcttacatttagct
gctactgaaggagatgacaagattttgagtctactcctcacgcatgagaaggtgtctccc
atggtcaacctccccaatgctgaaggtctcagtgcaattcacctggtggtgatggcaaat
agcatgtcctgcctcaaacagctgattgctgctggagttaacatcaatgctcaggaacaa
aaatctggacgaactgcattgcacttggctgttgaacaagagaacatccccttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacatacgatgggacaactcca
cttcacatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagcaggt
gccaatcctcacattgagaactttgagccattgtttgatctagattatgtgaaagacgac
gaagatgatgatgaagggattgtgcctggaacaacaccactggatatggcagccaactct
gaggtgtatgacatattaaatggcaaaccctatgagtcagcagaggttctggaggactta
ctcacacaaggacatttgagagagctgaatgagaattccaagatgcagctttacaaacta
ttggaattgcctgatccaaccaaaaactggtccaccctagcacaaaaactgggtcttggc
attcttaataatgccttcaggttgagcccttccccatcgaagactctgctggataactat
gaggtgtctggtggtacagttcaagagctgatcactgctttgagacagatggatcacaca
gaagccatagaaataattcaggaagcactgtccatctcacgcagaccgtctcccctggag
gacagcacagcaaaagctcttccattatcatcaccgctcacctttgcaaatggagagaca
ggtgaggtctataacagcagattccaagaccctgaaagtacgtgtgacagtggtgtggag
acctccttccgcaagctgagcttcacttactcagactctctgagcagcaagtcctcacta
acacttggcaaaatggccctgggctatggacatgaaagttcagggcaaagcaattacata
gctgactag
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