KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121362673
Entry
121362673         CDS       T07608                                 
Symbol
KDM5A
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pruf01009]
    121362673 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pruf03036]
    121362673 (KDM5A)
Enzymes [BR:pruf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121362673 (KDM5A)
Protein phosphatases and associated proteins [BR:pruf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121362673 (KDM5A)
Chromosome and associated proteins [BR:pruf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121362673 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD_ash2p_like
Other DBs
NCBI-GeneID: 121362673
NCBI-ProteinID: XP_041340283
LinkDB
Position
Unknown
AA seq 1692 aa
MAGGGGSRYAAEFVPPPECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPPKDWQPP
FACEVQSFRFTPRIQRLNELEAMTRVKLDFLDQLAKFWELQGSNLKIPVVERKILDLYGL
SKIVANKGGFEVVTKEKKWSKVASRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
IQKPNLDLKEKVEAEDLSSDAQASPKQASRMNVMLKRARRVKSQAEAGEMSRNTELKKLQ
IFGAGPKMMGLALGAKDKEDEVTRRRKGTRSEAFGMQMRQRKGTLSVNFVDLYVCLFCGR
GNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVREY
TLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSG
FPVKDGRRKLMPEEEDYALSGWNLNNMPILEQSVLAHINADISGMKVPWLYVGMCFSSFC
WHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEDVMKELAPELFESQPDLLHQLVTIMN
PNVLMEHGVPVFRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSH
YRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVCKEMTLLIEEETRLRESVVQMGVLMS
EEEVFELVPDDERQCTACRTTCFLSALTCSCNPERLVCLYHPSDLCPCPMQKKCLRYRYP
LEDLPSLLYGVKVRAQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYPENDLF
RRLRDAVKEAETCASVAQLLLSKKQKHSRVSQDSGRTRTKLTMEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQEAMIDEIPDSSKLQELIDMGSGLYVELPELPRLKQELQQ
ARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKVEAIQNGSNYAYL
EQLESLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRTFLKKNSSYNLLQVLSPRTDI
GVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDGLEEARDAAAVVAVFKEREQKEIEA
MHALRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHSGCVPLPKTSSQKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQQSA
FNRVIGSVSSSPRQTLDYDDEETDSDEDIRETYGYDIKDNASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEDLMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHVMEDDSMDEKPLKMRGRD
SSERKRKRKLERAEQFFGDMKQKSKELKKLEKPKKKKLKLTMDKTKELNKLAKKLAKEEE
RKKKREKAVVAKVELAKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKPLQGPSSPAHASPPPFLLS
YKLPMEDLKETS
NT seq 5079 nt   +upstreamnt  +downstreamnt
atggcggggggcggcgggtcgcgctatgcggcggagttcgtgccgccgcccgagtgcccg
gtgttcgaacccagctgggaggagttcagcgacccgctcggcttcatcggccgcatccgc
ggcctggccgagaaaaccggcatctgcaagatccggccccccaaggactggcagcctcca
tttgcatgtgaagtacaaagttttcgtttcactccacgaattcagcgcctgaatgaactg
gaggcaatgacaagagtgaaactggacttcttggatcagttagcaaaattttgggaactc
caaggatccaatttaaaaatccctgtggttgagagaaaaatactggatctatatggtctg
agcaagattgttgccaacaaaggaggctttgaagtagtgaccaaagagaagaaatggtct
aaagtggcgagtcggcttggctacctgccagggaaaggcacggggtcactgctcaagtct
cactatgaacggatcctgtatccctatgagctcttccagtccggggtcagcctcatgggc
atccaaaagcctaacttggatcttaaggaaaaagtggaggctgaggacctcagttcagat
gcccaagcttccccaaagcaggcttcaaggatgaatgttatgctgaagagagccaggcgt
gtcaaatcccaggcagaggcaggagaaatgagtagaaacactgaactgaagaagctgcag
atctttggagctggacccaagatgatgggactggcattgggagcaaaggataaagaggac
gaggtgacgcgaaggcgcaagggaaccagatcagaagcgttcggcatgcagatgaggcag
cgcaaaggaactctttctgtcaacttcgttgatctctatgtttgcttattttgtggtaga
ggaaataacgaggacaaactgctactgtgtgatggatgtgatgacagctatcacaccttc
tgcttgattcctcctcttcctgatgtacccaagggtgattggaggtgtccaaagtgcgtt
gctgaggaatgcaacaaaccccgagaggcctttggatttgaacaagctgtcagggaatat
actctccagagctttggtgaaatggctgataacttcaagtctgattatttcaacatgccg
gtccatatggttcccactgagctggtagaaaaggaattctggcgattagtgagcagcata
gaagaagatgttattgtggaatatggggccgatatctcatccaaggactttgggagtggc
ttcccagtgaaggatggccgacgaaagctgatgccagaggaggaggattatgctctctct
ggttggaacttgaacaacatgcccattctggagcagtcagtccttgctcatatcaatgca
gacatctctggcatgaaggtgccctggctgtatgtggggatgtgcttctcctccttctgc
tggcatattgaagaccactggagctattcaatcaactacctgcattggggagagccgaag
acgtggtatggtgtgccctctcatgcagcagagcagctggaagatgtgatgaaggaattg
gctcctgagctctttgaatcccagcctgatctcctgcatcagctggtcactattatgaac
cccaatgtgctgatggaacatggtgtaccagttttcaggacaaatcagtgtgctggcgag
tttgttgtgacctttcctcgtgcctatcactctggatttaaccagggatataactttgct
gaagctgtgaacttctgcactgctgactggctgcccattggacgtcagtgtgtgagtcac
taccgaaggctgggacgtcactgtgttttctcccacgaagagctgatcttcaagatggct
gcagatccagagtgcctggatgtggggctggctgccatggtctgcaaggagatgactcta
ctgatagaggaagagacacggctgagggagtctgttgtacagatgggagtgttgatgtct
gaagaagaggtgtttgagctggttccagatgatgaacgtcagtgcacagcttgcagaacc
acgtgcttcctgtcagctcttacgtgttcctgtaatcctgagcgcctggtgtgcttgtat
catccttctgatttatgtccctgtcccatgcagaagaaatgtctaaggtaccgctatcca
ctagaagaccttccttctttgttgtatggagtgaaggttagagcacagtcttacgacact
tgggtcagtagagttacagaggctctgtctgccaatctcaaccacaagaaagatgtgatt
gagctgagagtaatgttggaggatgctgaagacaggaaatacccggagaacgatcttttc
cgcaggctccgagacgctgtgaaagaagcagagacctgtgcttcagtagcacagctgctt
ctgagcaaaaagcaaaaacacagcagagtgagccaagacagtggaaggacacggaccaag
ctgactatggaggagcttaaagcatttgtgcagcagctgttcagcttgccatgtgttatc
agccaggcccgacaagtaaagaatctgctcgatgatgtggaagagttccatgagcgtgct
caggaagctatgattgatgagatcccagactcttccaagctgcaggaattgatagacatg
ggctctggcctttatgttgaacttcctgaactgccaaggttgaagcaagaactgcagcag
gcacggtggctggatgaggtgaggtccaccctcttggatccccagagagtcaccctggat
gtgatgaagaagctgattgactctggtgtgggcttggcaccacatcacgctgtagaaaaa
gccatggctgagctgcaggagctgctcacagtctcagagaggtgggaggagaaggccaag
gtctgcctgcaggccagaccacgccaaagtatgatggctctggagggcatcgtgaatgag
gcaaagaacatccctgcttacctgcccaatgtgctggcactgaaagaagccctgcagcga
gctagagactggacagccaaagtggaggccattcagaatgggagcaactatgcgtacctg
gagcagctggagagcttgtctgccaagggccgccccatcccggtgcgccttgatgccctg
ccccagctggagtcccaggtggctgcagctcgtgcctggagggagcgcacaggaaggacc
ttcctcaagaagaattccagctacaacctgctacaggttctgagcccgcggaccgatatc
ggtgtttatgggagcagtaagaacaggcggaagagggcgaaggagttgatggagaaggaa
aaggagaaagatcttgacttggaatccctgagtgaactggaggatgggctggaggaggcc
agggacgctgcagctgtggtggctgtattcaaggagcgggagcagaaggaaattgaagcc
atgcacgctctcagggcagccaacttggccaagatgaccatggtggaccgaatcgaagaa
gtcaagttctgcatctgccgcaagacagccagcgggttcatgctgcagtgtgagctgtgc
aaggactggtttcacagtggctgcgtgcccctgcccaaaacgagctctcagaagaagggc
tccagctggcaggccaaagaggtgaagttcctgtgtcccctgtgcatgcgctcccgccgg
ccgcgcctggagaccatcctgtcgctgctggtgtccctgcagaagctgcccgtgcggctg
cccgagggggaggccctgcagtgcttgacagagcgagccatgagctggcaggaccgagca
cggcaggccctggccaccgacgagctctcctctgctttggccaagctctccgtgctcagc
cagagaatggtggagcaggcggctcgtgagaaaacagagaaaatcatcagcgcagagctc
cagaaggcagcagctaaccccgacctgcagggacacttgacaagttttcagcagtcagcc
tttaacagagtgatagggagcgtgtcctcatccccacggcagactttggattatgatgat
gaagagacagactctgatgaagacatcagggagacatatggctatgacataaaggacaat
gccagtgtgaagtcttccagcagcttggagcccaatttgttctgtgatgaggaaatcccc
attaaatcagaggaggtggtgacacacatgtggactgctccctccttctgtgctgaacac
gcctattcctctgcttctaaaagctgttctcaaggttctagcactccaaggaagcagcct
cggaagagcccgctggtacctcgcagcttggagccccctgtgttggagctgtcacctgga
gcaaaagctcagctggaagatctgatgatggtaggagatctactggaggtatctctggat
gaaactcagcacatctggcggattttgcaggccactcatccgccctctgaggacaggttt
cttcatgtcatggaggatgacagcatggatgaaaaaccactgaaaatgagagggagggac
tcttctgagaggaagcggaaacgaaaactggagagagcagagcagttttttggagatatg
aagcaaaaatctaaagagctgaaaaaactggaaaaacccaagaagaagaagctaaaactc
actatggataagacaaaggagctgaacaagctggcaaagaaactggctaaggaagaggag
cggaagaagaagcgagagaaggcagttgtggcaaaggtagaactggcaaaggagagcacg
gagaaaaaaagagagaagaaggttctggatattccttccaagtacgactggtcaggagca
gaagagtcagatgatgagaatgccgtgtgtgctgctcagaactgccaaaggccctgcaag
gacaaagtggactgggtgcagtgtgacgggggctgcgatgagtggttccatcaggtgtgt
gttggggtctccccagagatggctgagaatgaggattacatctgtataaactgtgcaaag
aaacccctgcagggccccagcagccctgcccacgcctcacctcctcccttcttgctgagc
tacaaactaccaatggaagatctcaaggagacgagttag

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