Pyrgilauda ruficollis (rufous-necked snowfinch): 121362806
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Entry
121362806 CDS
T07608
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121362806 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121362806 (ATRX)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121362806 (ATRX)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121362806 (ATRX)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121362806 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
121362806
NCBI-ProteinID:
XP_041340560
LinkDB
All DBs
Position
Unknown
AA seq
2450 aa
AA seq
DB search
MEVMKWNSFLSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKSIGKSREPKGSPAS
MENNKDEGSSSSERTKSLGSSRSKRKPTVVTKYVGSDDEQIADETVNEDISNENSENDVD
MQSLPKGTVVVQPEPVLNEDKDGFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACG
QQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFC
HNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNK
KKMKVENEKSKIYDHTVKFSPKKNNANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKT
KKLIETTTNLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLSLEEGLNLE
IQALNVKIKDKNTKEKKPEARSEKNEVKKDEEKEHVALKEDDTTQTRKKVVSERPDNEPM
DQSVPSVEQTDNKAPPGEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESA
MEIQMPSDEQDSGNAAADHETPNSNTKVNAPVKDTKGGTKLKSSAKGTKELIVKLTPVSL
SESTVKGEGQDSSLEKECKDDASKDVDNASKDVDESKDVDASQPGAANSDSGKQNHSAGS
EPSTENDAAPMEDSDLRRSPRVKTTPLRRPTDISPLTSNSEEDSNDTSNEKQKGKASKQP
RRKNDKRNTSDSAADGPSPNKLSKSKKPYDLGHSSDSDEVPAVLKEAGMMSRSSSDSESN
SEAPAKNQKTSDFQKSQPVKDENGKRKRKSSSSGSDLDAKTGKSAKNAAAAKKKRQNYSD
SSNYDSELEKEIQMLSKIEAAKKSKKKFSRKDDSYDSSDEEQRKKVSSKRKVNLKKKRGK
SSEEDDDGEKSSPEKEINHSTKDKKTGKRSAAKDKISRDSKEKSAKGKWDESSDAEKSSL
EKEESPEVKKKDLKKKKTQDDSSSESTEKSSKKEHKLESSKDRLKNKKGSESKAKKSEKL
KTKGFKKDQDDSSSDLDKSSPEKGSSNSSENDKIKKEPVFTEKRKLRERVAKRVHIDFSS
DTEKSPQKEESSDDDAMRRKKRTETKEKRKISHKKKISKKEQNDSSSSDEESYEDTKKKV
KRGSVKESKKSNLKKKVAKKKVVVTSSSQSDKEENDDQNSTGDGSSDEQKIRPVTESLML
SADAGFCQSSGDEGDALSRTIPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDTSSD
EQPEEGKKKPAKQTENTGDDGEKEKEDKKSEKEEPNSESDSEEEETSKKPRYRHRLLRQK
LTVSDGESGEEKKVVKPKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRP
RTRSAKKAEAEENQRSYKQKKKRRRIKVQEDSSSENENKSNSENEDNDDSKSPGKGRKKI
RKIIKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLD
EDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGK
TLQVVSFLHTVLLCDKLDFRTGLVVCPLNTALNWLNEFEKWQEGLEDEEKLEVYELATVK
RPQERSYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDE
GHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRF
INPIQNGQCADSTPVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMT
PIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKG
YFDEDSMDDFIASDSDETSMSLSSDDYAKKKKSKGKKVTKECSSSGSGSDNDVEVIKVWN
SRSRGGGEGNVEDLTNNPASTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKM
VLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKSERDQPPIYKGEGKWFRNI
DYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNP
SYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTM
NELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHK
EEEELTEEERKAAWAEYEAEKKGMTMRFNMPTGTNTMPTNFNSQTYIPYNLGALSAMSNQ
QLEDLINQGREKVVEATNSVAAARIQPLEDIISAIWKENLTLTESQVQALALNRQASQEL
DVKRREAIYNDVLGKQQMLIGCVQRILMNRRLQHQYNQQQQQQMSYQQAAMGHLMMPKPP
NLIMNPSSYPAIDVRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atggaggttatgaaatggaacagctttttaagtgaaagcaagttgaatacattggtacag
aaactccatgacttcttggctcactcatcagaagaatctgaggacgcaaactctcctcca
gcattatctaaaaacaaaagtataggtaaaagtagggaacctaaaggaagtccagcttca
atggagaacaacaaggacgagggaagtagttcttcggaaagaaccaaatccttaggatca
tcccgttccaaaaggaaacctacagttgtaacaaaatatgttgggtcagacgatgaacaa
attgcagatgaaactgtaaatgaagatatttcaaatgagaactcagagaatgatgtagat
atgcaaagcttgcctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagac
aaagatggttttaaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaa
gctcccaaaaagcgtggagaagaaggactccatggaattgtgagctgtacagcttgtggg
cagcaggtgaaccattttcaaaaggattcaatctatagacaccctacactaaaagtgctt
atttgtaagacttgctacaaatattacatgagtgatgacatcagtcgtgattcagatggg
atggatgaacagtgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttttgc
cataacgccttctgtaaaaagtgcattttgcgcaacctgggccgaaaggagctctcgact
atcctggatgaaaataaccagtggcactgctatatttgccatccagagcctttgttggac
ttggtcactgcttgtgatagtgtctttgaaaatttagaacagttgcttcaacaaaacaaa
aaaaagatgaaagttgaaaatgaaaaaagtaaaatatatgaccacacagtcaagttttct
ccaaagaaaaataatgcaaactgtaatggggaagaaaaaaaattagataattcatattca
ggttcactaacatattcttataaagcactaatggtgccaaaagacttgcttaagaaaaca
aaaaaactgattgaaactacaacaaatctgaattctagctttgtaagctttttgaaaaat
gctgcagaaaatgtagaaataagcccaactgtgcaactgtgccagctgaaagcttttaaa
tctgtgctgagtgacatgaaaaaagctcatctgtcactagaagaaggcctaaacctggag
attcaagcactgaatgttaaaatcaaagataaaaataccaaagagaaaaaaccagaggct
agatcagaaaaaaatgaggtgaaaaaagatgaagaaaaggaacatgtggcattaaaagag
gatgacaccacacagacacggaaaaaagtcgtgtcggagcggcctgacaatgagcccatg
gatcaaagtgttccctcagtggagcagacagataacaaggcacctcctggggaggagaag
aagtctggcagaaatgaagaaccacagtatgagcccaatagtacagaggctttagacatg
gatatcgtgtccatcccctcatccgttcctgaagatatttttgagactctggaatctgct
atggagattcagatgccatcagatgagcaggacagtgggaacgcagcagcagatcatgag
actccaaattcaaatacaaaagtcaacgctcctgtgaaagataccaaaggtggtaccaag
ctaaaatcgtcggctaaaggaacaaaagagctcattgtaaaattgactcctgtttccctt
tcagagtccacagttaaaggtgaaggtcaagacagcagtctagaaaaggagtgtaaagac
gatgcatctaaagatgttgataatgcatctaaagacgttgatgaatctaaagacgttgat
gcatctcaacctggggcagcaaactctgattctggaaaacaaaaccacagtgctggcagc
gagccctccacggagaacgacgctgcgcccatggaggactcggatctccggaggtcgccc
cgtgtcaagaccacccctctgaggcggcccacggacatcagccccctgacatccaactca
gaagaggacagcaatgacacgagcaatgaaaaacagaaggggaaagcatccaagcaaccc
aggaggaaaaacgataaaagaaatacttctgacagtgctgctgatggtcccagtcccaac
aaactttccaaatccaaaaagccatatgacttaggtcacagctcggactctgatgaggtg
ccagctgtccttaaagaagcaggaatgatgagtcgcagctcctcggacagtgagagcaac
agtgaagcaccagcaaagaatcaaaagacttcagattttcaaaagagtcaaccagtgaag
gatgaaaatgggaaacgaaaaaggaagagttccagttctggttcagatttagatgctaaa
acaggcaaatcagctaaaaatgctgctgctgctaaaaagaaacgacaaaactactctgat
tcttcaaactatgattctgagttggaaaaagagatacaaatgttgagtaaaattgaggct
gcaaagaaatcgaagaaaaaattctcaagaaaagatgatagttatgattcctctgatgaa
gagcagaggaaaaaagtaagcagtaagagaaaggtaaatctgaagaagaagagaggtaaa
tcttctgaagaagatgatgatggtgagaagtcttctccagagaaggaaattaatcactct
actaaagataaaaaaacaggtaagaggtcagctgctaaggacaagataagcagagactca
aaagaaaaatctgcaaagggaaaatgggatgagtcatctgatgctgagaagtcttcacta
gaaaaagaggagagtcctgaagttaagaagaaggatttgaaaaagaaaaagacacaggat
gattcttcttctgagagtactgagaaatcgtcaaagaaagagcacaagttggaatcttcg
aaagacagactcaagaacaaaaaaggatcagaaagcaaagcaaagaaatctgaaaaattg
aaaacgaaaggtttcaagaaagaccaagatgattcctcttctgatcttgataagtcatct
ccagagaaaggaagtagcaattcttctgaaaatgacaaaattaaaaaggaaccagtgttt
acagaaaagagaaaattgagagagagagtagctaaaagagtacacattgatttttcctct
gatactgagaaatctccccagaaagaggagagttctgatgatgatgccatgcggcgtaag
aaacgaactgaaacgaaagaaaagaggaaaataagccacaaaaagaagatttccaagaaa
gaacagaatgactcatcctcttctgatgaggagtcttacgaagacactaagaaaaaggtt
aaaagaggatcagtaaaagaaagtaaaaagagcaacttaaaaaagaaagtggcaaaaaag
aaggtggttgtcacttcctcttcccagtctgataaggaggaaaatgatgatcagaattcc
acaggcgatggaagcagcgacgagcagaagatcaggcccgtgactgaaagcttgatgctg
tctgctgacgcaggattttgtcagtcatcaggagatgagggagatgctctatcaaggact
atcccaatggaggaggaggaagatgatgatgatgacgaccctgagaatagaattgccaag
aaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatacgtcttcagat
gagcagccggaggaaggaaagaagaaacctgcaaagcaaactgaaaacacaggagatgat
ggagagaaggaaaaggaagacaagaagtctgaaaaggaagaacctaattctgagtcagat
tcagaggaggaagaaacatccaagaagcccagatacagacacagactgctgaggcagaag
ctcactgtgagtgatggggagtcgggagaagaaaagaaggtggtgaaaccaaaagacaaa
aaagaaggggggaagcgcagaaatagaaggaaagtgagcagtgatgactccaatgactct
gagttccacgagtctgcagtgagtgaggaggtcagtgagtctgaggatgaccaaaggcca
aggacaagatctgccaaaaaagctgaggcagaggaaaaccagcgcagctacaaacagaaa
aagaaacgaaggaggataaaggttcaggaggattcatcgagtgaaaatgagaataagagt
aactctgagaatgaggacaatgatgactcaaaatctcctggaaaaggcaggaagaagatc
aggaaaattattaaagatgataagcttagaacagaaacacaaaatgcgcttaaagaagaa
gaagaaagaagaaaacgtatagcagagagagaacgggagagagagaaattgagagaggtg
atagagattgaggatgcctcacctctgaaatgtcccatcacaaccaagctggttttagat
gaagatgaagaaaccaaagaacccttagtgcaggttcacaggagtatagtgaccagactg
aaaccacaccaagtagatggtgttcagttcatgtgggattgctgctgtgaatctgtaaaa
aaaaccaagacatctcctggctctggctgcattcttgctcactgtatgggcctgggaaaa
acattacaggtagtaagttttctccacacagtcttgctatgtgacaaactggattttcgg
acaggtctggttgtgtgtccactcaacactgccttgaactggctgaatgagtttgaaaaa
tggcaagaaggtttagaagatgaggagaaactagaggtctatgagctggcaactgtgaag
aggcctcaggagaggagctacatgctgcagcactggcaggatgagggaggtgtgatgatc
attggctacgagatgtatcgaaacctggcacaaggcaggaatgtgaagagtagaaaactt
aaagaaatatttaataaagctttagtcgacccaggtcctgactttgtggtgtgtgatgaa
ggacacatattgaaaaatgaagcatctgctgtctccaaggcaatgaattctattaaatct
aggagaagaataattctgacaggaacaccactgcagaataatcttatagaatatcactgc
atggttaacttcattaaggagaatttgcttggctcaattaaggagttccggaatcggttc
atcaaccccatccagaacgggcagtgtgcagactccacccccgtggatgtcagggtgatg
aagaaacgtgctcacatcctctatgagatgttggctggctgtgttcagaggaaggattac
acagcattaaccaagttcctgcctcccaaatacgagtacgtgctcgaggtgaggatgacc
cccatccagtgcaagctgtaccagtattacctggaccatctgacaggtgtaggtggtggc
aatgaaggtggaagaggcaaagctggagctaaactattccaggatttccagatgttgagc
agaatctggactcacccttggtgtttgcagctggactatattagcaaagaaaataagggc
tattttgatgaagacagcatggatgacttcatagcctcagattccgatgaaacttccatg
agcttaagttcagatgattatgcaaagaaaaaaaaatccaaggggaaaaaggtgacaaaa
gagtgtagctcaagtggcagtggcagtgataatgatgttgaagtcattaaagtctggaat
tcaagatctcgtggaggtggggaaggaaatgtagaagatcttacaaacaacccagcatca
acaaagtcagatgaaggcaaagctacatcctcttccaatcctggtagcccagctccagac
tggtacaaagattttgtcactgatgcagatgctgaggtgttggaacattctgggaaaatg
gtgctgctctttgaaatcctccgaatggcagaggagctgggagacaaagtcctagtgttc
agccagtccctgatatctctggatttgatagaagatttcttggagctggctaacagggag
aaatctgagagagatcagcctcctatctacaaaggtgaaggaaaatggttcagaaatatt
gattattatcgcttggatggctcaaccacagctcagtccagaaagaaatgggctgaggag
tttaatgatgaaactaatgtgagaggccgcttgtttatcatatccactaaagcaggttcc
ctgggaataaacctggtggctgctaacagagtcatcatctttgatgcctcctggaacccc
tcctatgacatccagagcatcttcagggtgtatcgcttcgggcagaacaagcctgtgttt
gtgtacaggtttttggctcagggaaccatggaggacaagatctacgaccggcaggtgacg
aagcagtcgctgtccttcagggtggtggaccagcagcaggtggagcggcacttcaccatg
aacgagctcaccgagctctacaccttcgagccagacctgctggatgaccccaactccgag
aagaagaagaagagggacacccccatgctgccaaaagacaccatcctggcagagctgctc
cagatcaacaaggagtacatagttgggtaccacgaacatgattcactcctggaccataag
gaggaagaggaactcactgaagaagagaggaaggcagcctgggcagaatatgaagcagaa
aagaagggcatgaccatgcgtttcaacatgcccacagggaccaacacaatgcccacaaat
ttcaactctcagacatatattccttacaatttgggtgctctgtcagcaatgagcaaccaa
cagctggaggacctcattaaccaaggaagagagaaggtagtggaagcaaccaacagtgtg
gctgcagcaagaatccagccccttgaagacatcatttcagccatatggaaagaaaactta
accctgacggagagccaggtgcaggccctggccctgaacagacaggcgagccaggagctg
gatgtgaagcgccgagaagccatttacaacgacgtcctcgggaaacagcagatgttaatc
ggttgtgtccagaggatcctgatgaacaggcggctccagcaccagtacaaccagcagcag
cagcagcagatgtcctaccagcaagcagccatgggccacctcatgatgccaaagcctcca
aatttaatcatgaatccttccagctacccagccatagatgtgagaggaatgtatcagtca
gtgtctggtgggatgcagccaccacccctacaacgagcaccacccccaatgagaggcaaa
aatccagggccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
