Pyrgilauda ruficollis (rufous-necked snowfinch): 121363094
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Entry
121363094 CDS
T07608
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121363094 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pruf01009
]
121363094 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pruf04515
]
121363094 (PCDH11X)
Protein phosphatases and associated proteins [BR:
pruf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121363094 (PCDH11X)
Cell adhesion molecules [BR:
pruf04515
]
Cadherins
Protocadherins
121363094 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Motif
Other DBs
NCBI-GeneID:
121363094
NCBI-ProteinID:
XP_041341124
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
SASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILG
HSDNCWMPPALMQFQQPNTSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQAGPRP
QFYNTCERHCAGEDPVKVIPLANFAASHPAPGAGSSTTFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcctgttggcctgcatcgtgttccaa
tctggcgcgcaggagaagaattacaccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatctgctcaaggatctcaacctaacgctggaccctgacgtgcccctgtcctccccg
ctgcagttcaagctggtctacaagaccggggacgtgcccctggtgagggtggaggagaac
accggggagatcttcacggctgccaaccgcatcgaccgcgagaagctgtgcgccggcatc
ttcagcgagaaccgctgcttctacgaggtggaggtggctgtgctgcccgacgaggtgttc
agactggtcaagatcagattcctgatcgaggatataaatgacaacgccccccttttcccc
tcgacagttattaacatctctatcccggagaacacggccattaattcccgctactctgtc
ccgtctgccatcgacccggacatcggcgtgaatggaatccagcactatgagctcctcaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgaccagggtcaaaatgta
tttggtcttgacataactgagacacctgagggagataagtggcctcaactgattgtccag
cagatcctggatagggagcagaaggacacctatgtgatgaaaatcaaagttgaagatggt
gggagccccccgaggtccagcactgccatcctgcaggtgacggtgacggatgtcaacgac
aaccgcccggtcttcaaggagaacgacatcgaggtcagcgtgcccgaaaatgcccccgtg
ggcacctccgtgtcccagctccacgccaccgacgcagacctgggctccaatgcacaaatc
cacttctacttcagcaaccagatctccagcctggccaaaaggctctttgccatcgataac
accactggcctcatcaccatcagggagccgctggacagggaggagtcccctgtgcacaaa
ttgactgttctggcgagcgatggcagctccacgccgtcaagagcaaccgtgactgttaat
gtcacagatattaatgacaatgtcccgtcaatagacaccaggtacatcatcaaccccgtg
aatgggacagtgcttttgtctgagaaggctccccttaatacaaaaattgccttgataaca
gtgatggacaaggatgctgatcagaatgggaaagttacctgttttacagatcatgatgtc
cctttcaggctaaaaccagtgtttgataatcagtttctcctggagacagccacatttcta
gactatgaagctacacgggaatatgccatcaaaatagtggcttcagattcagggaagcct
cccttaaaccagtctgcaatgctcctgatcaaaattaaagatgaaaatgacaacgcccca
gttttcacacagcctatcatcggcctttccatccctgaaaacaacgctcctggtactcag
ctgaccaagatcagcgctacagatgctgacagcgggcggaatgccgagatcagctacatc
ctgggctccgacgcgcccccaattttcaacctggaccgccgcacaggcatcctgacagca
gtgagaaagctggacagagaaaagcaggacaggtactctttcactgtgctggctaaggat
aatgggatgccacctttgcagaccaatgctaccgtgacggtgtcagtgctggaccagaat
gataacagccctgctttcacacataatgaatataatttctatgtgccagaaaacctgccc
atgtatggcacagtggggcttatcacagttacggatgctgacgcgggagacaacgctgca
gtcactctctctatcttaaatggtagagataatttcattatagatccactcactggtgta
ataaggcctaatattacctttgatagggagcagcaggggtcatacactttccaggtgaaa
gcagtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgataacaggcctgtttttgttattccctcatctaattattcctatgagttg
gtcccaacgtcagccagcccggggtctgtagtcactaaagtctttgcagtcgataatgac
acgggaatgaacgcagagctccgctatagcatcataggtgggaactccaggggcttgttt
accattgaccaattaacaggcaatatcactttgaaagagaaggtaattacatcagatcat
ggcttgcacagactggtgatcaaggtgaatgacctgggacagccggagtctctttacacc
atagctcttgtgcacttgtttgtgaacgagacggtcaccaacagctcctacgtgcaagag
ctggtgcgtaggaatatggaaactccagttggccagaacattggggatggtgagataacc
ccacagaccaatgattatgtcaagatcatcattgccattattgcaggcaccatgacagtt
attctggtaatttttgttaccgctttagtccggtgccgccagacgcccaggcacaaggtt
gtccaaaaaaataagcagagtggtgaatgggtttcccccaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctctccaaagagtctcctcctcaactttgtgact
attgaagaatctaagcctgatgatcctggccacgagcacataaatggcactttagacatt
cccgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaaacctgatagcccagacttagcaaagcactacaagtctgcttctccacagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaattg
cctctagataacacctttgtggtgggctgtgactcactttccaagtgctcatccagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcacacaaaagaagtgggcaggccacaaactcctttgaaagaaacc
accttggagccctggactcagccacagccccagcgccgtgtcaccttccacctgccagat
ggctcccaggaaagctgcagtgacagcgggctcggagaccacgagcccacgagcggggcc
agcgcgtcccacccgctgcccctgggcttcccccaggacgagttctacgagcaggcgtcc
cccaacagccgcacggagggagacggcaactccgaccccgagtccactatcgaagtgaac
ctgcagaaagctctggccgaagcctctgagaactgcacgcaggagtgcctcatcctcggc
cactccgacaactgctggatgccgccggccctgatgcagttccagcagcccaacacctcc
ttgccatcgtttggcttccagcaaggctggggccggggagccagacccgagggacgccac
actctcgggaggcccctgccaaaggacgacagtgacaaaggccaggcagggcccaggccc
cagttctacaacacctgcgaaagacattgcgccggcgaggatcccgtcaaggtcatcccc
ctggcaaacttcgccgcgtcccacccggcgccgggggctggcagcagcaccacgtttata
cacgagcaccagctgtaa
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integrated database retrieval system
