Pyrgilauda ruficollis (rufous-necked snowfinch): 121363281
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Entry
121363281 CDS
T07608
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pruf03016
]
121363281 (TARBP1)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121363281 (TARBP1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
121363281 (TARBP1)
Transfer RNA biogenesis [BR:
pruf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121363281 (TARBP1)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121363281 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
121363281
NCBI-ProteinID:
XP_041341408
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
METLEGNQIHVIKPVLPKLNSLYELAISGDKDCWLFHPSWHVCIYRRMFESENKTLTKEG
ILHFLELYETKHLPNSLGFSEFVIGPLMDALSESSLYSRTPGQPIGACPPLGMRLQKFLA
TYLTLLPEEEKGSFLLKFIRKITSRHWCAVPILFLSTALASIPACKVLGAEGLHALRDVL
QCTMITHQILLRGAAQCYLLQTAVHLTDVEKVSFPEVSSFLLSLRPEESLRRDTLLWTEL
CSWLQVNDRCFRKSVTSDFERQETSSLCQYVHSLVGEYLKTPASERENCFMPDWFEAKLV
STMILLAADVEQMKNKYSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQLL
LKLLQTRWLKCSNTQDDEVLFFIWKSLVTPVESILEFVLRRLTTNELSTVGDLDRCDLYL
ALIPEMVNLCLKVNWKKMSSIKNFLSSLINASIRNLQERNSEKEPKVKEQIRKVASMASL
AAVCEIMDGELKAHLESLPSVDALKKLISFSQLNEILKKPSYIEEKNSLCEETTSQGWGK
IVARYVRDQWICLRFVLNSFATLAQGNEETSVMSLSTAERSKEILQSALEALSILPSDQV
SPVFDCMKILVPKLLDSSEALCVEAFDLAWKIISSLSNTQLIFWANLKAFVQFIFDTEVL
AVAASAKGQAYTKIKEIIFKLIDLSTTKTGVFNVVLSHCCQSWIFSTVDERSALTNAFLN
AGNYSELITEACVFGTVFRKDQRHIQDVHAFIENLGEKCAANVVTESTNRDDHYVRICAV
KFLCWLDGSNTLHKTFMEDIFIKLLDKDELVSRSRTRYYANSLQHRIKNRVWQTLLVLLP
KLNQTFLCGTLDRVFQAGFSNNQASVKYFIEWIVILTLHRYPQFLHKFWDCFCYDEEKLK
KSICTFLSVLAHFDIILQNTSEKKPALKKALIVVLQWCFSHNFSVRLYALIALKKIWGMC
RMLHVEEYEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPVEDYSLETIFY
ILPRLSELAEDEWISLSKFDRFTDIPLPAAFQWCHSRRELRDLKPSDWSQQDMGSHLAEA
DSQTEWTDVQKKIIPWKNSTPSLDLEMAFQDRAAKLGKSNSRLIVVASLIDKPTNLGGLC
RTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLEQKKTEGYTII
GVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSG
ALLIWEYTRQQVIKQKQQQ
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttggaaggaaaccagatccacgtcataaagccagtattaccaaaactaaac
agtttatatgagcttgccatatcaggggataaagattgttggctgtttcacccctcgtgg
cacgtgtgcatttacagacgaatgtttgagagtgagaataaaacgttgacaaaagaagga
attcttcattttctggagctttatgaaacaaagcatcttccaaattcacttggtttctca
gagtttgttattggaccactgatggatgccctctcagaaagttccctctacagcaggaca
ccaggtcaaccaataggagcctgtcctcctttgggaatgaggttacagaagtttttggct
acttatctcactcttcttccagaagaagaaaaaggtagcttcctgttaaaatttattcgg
aagataacaagtaggcattggtgtgctgttcctattttgtttctttctacggctttggca
tctatccctgcatgtaaagtacttggtgctgaaggacttcatgctttaagagatgtcctc
cagtgtactatgattacacatcagattttgttgcgtggagctgctcagtgctatcttctt
caaacagctgtgcatttgacagatgtggagaaagtgtccttcccagaagtttcaagcttt
cttctgtcccttagaccagaggagtccctaaggagagatactttgttatggacagagctt
tgcagttggttgcaagtgaatgacaggtgcttcaggaagtctgtaacctctgattttgaa
cgtcaggagacatcatcattgtgtcaatatgtgcacagtcttgtgggagagtaccttaag
acacctgcatctgaaagagaaaattgctttatgcctgactggtttgaagctaagcttgtc
tcaacaatgattctgttggctgctgacgtggagcagatgaagaataaatacagtggaaaa
agcaacatagagtggattgaactagaggctttcttgaaccctcttctggatgtcttgatg
aaacttggcagtaatgcttacataccaacactgaaaacagataaaagccttcagcttctc
ttgaagttattgcagacccgttggttaaaatgttccaatacgcaagatgatgaagtactg
ttctttatctggaaatctcttgtgacacctgtggagagtattcttgaatttgttctccga
cggcttactaccaatgagttaagcactgttggcgacttggatcgttgtgatctgtacttg
gctttaattccagagatggtgaatttgtgcttgaaagtcaactggaagaaaatgtcatct
atcaagaatttcctttcatccctgataaatgcatctattcgtaatcttcaggagagaaat
tctgaaaaggagccgaaggttaaggaacaaattagaaaagtagctagcatggcttcactg
gcagctgtgtgtgagatcatggatggagagctaaaagcacacctggaatctctgccttct
gtggatgctctgaagaaattaatttccttttctcaattgaatgaaatattaaagaagcca
tcttatattgaagaaaaaaatagcttatgtgaagaaacaacttctcaaggatgggggaag
attgttgcacgctatgttcgtgaccagtggatttgcctccgttttgttttaaattcattt
gcaacactggctcaagggaatgaagaaacttcagtaatgtcattgtctacagctgaaagg
tcgaaagaaattctacagtctgcattagaagccctatctattcttccttcagaccaagtt
tcacctgtgtttgactgcatgaaaatccttgttcccaagcttctggactcatcagaggct
ctctgcgtagaagcatttgatttggcttggaaaattatatcctctttgagcaacacccag
ctaatattttgggccaatctaaaagcttttgttcagttcatctttgatactgaggttcta
gctgttgctgcaagtgcaaaaggtcaagcatataccaaaataaaagagataattttcaag
ctcatagatctgtccactacaaagactggagtcttcaatgtagtccttagtcattgttgt
cagtcttggatattttccactgttgatgagagaagtgccttgacaaatgctttcttaaat
gctggaaattatagtgaacttatcactgaggcttgtgtctttggaactgtatttaggaaa
gatcaaagacacattcaggatgtgcatgccttcatagaaaatcttggagaaaaatgtgca
gcaaatgttgttacagaaagtacaaatcgagatgatcactacgttcgcatttgtgctgtt
aaatttctgtgctggttggatggatcaaataccttgcataagacgtttatggaagacatt
ttcatcaaattacttgataaggatgaactggtatccagatctagaacacgctattatgca
aactctttgcagcatagaattaaaaaccgagtatggcagacactcttagttcttctccca
aagcttaaccagacttttttgtgtggaactcttgacagagtttttcaggctggattcagt
aataatcaggcatctgtgaaatacttcatagaatggattgttatcttgactctacatagg
tatccccaattccttcataaattctgggattgcttttgctatgatgaagaaaagcttaaa
aaaagcatctgcacatttttgtcagtgttggcccactttgacatcattcttcaaaatacc
tcagagaagaagccagctttgaagaaagccctcatagttgttctgcagtggtgtttcagc
cacaatttcagcgttcggctttatgcattaattgcccttaaaaaaatctggggtatgtgc
agaatgctgcatgtggaagaatatgaagccctgacaccagttattgaatctagccttcaa
caggtggaaaacatgcacggcacagggaatgccagaaggaactggcagcgaatccaagat
cacttcttctttgcaacatttcatccagttgaggattatagtctagagacaatattttac
atccttccccgcctttcggaactggccgaggatgaatggatctccctctctaaatttgac
agattcactgacattcctttgccagcagcatttcagtggtgccattcccggagggagctt
cgtgatctgaaaccaagtgactggtctcagcaagacatgggttcacatttggctgaagca
gacagccagacagagtggactgatgttcagaagaagattataccctggaagaacagtact
cctagtttagacttggaaatggcatttcaggatcgtgctgctaaacttggcaaatcaaac
agcagattgattgtggtggcttcacttattgacaaacctaccaatttaggaggtttatgt
cgtacaagtgaaatatttggggcatctgcactagttgttggcagtcttcattatatacag
gataagcagtttcagcatctgagtgtttctgcagagcagtggctccctcttgtcgaggtg
aaaccatctcagcttgttgattatttagagcagaagaaaacagaaggctacactattatt
ggtgtggagcaaacagctaaaagttttgatcttacagaatattgcttcccagagaaatca
ctattattgctgggaaatgaacatgaaggaatcccagccaacctgattcaccacctggat
gtctgtgtggaaattcctcagcagggcattatccggtcactcaatgttcatgtgagtgga
gctctgctgatctgggagtacacaagacaacaagtgatcaagcagaaacagcagcaataa
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integrated database retrieval system
