Pyrgilauda ruficollis (rufous-necked snowfinch): 121363556
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Entry
121363556 CDS
T07608
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04110
Cell cycle
pruf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121363556 (SMC1B)
04114 Oocyte meiosis
121363556 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121363556 (SMC1B)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121363556 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
121363556 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
121363556
NCBI-ProteinID:
XP_041341908
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All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MGYLKLLVVKDFKSWRGQQVIGPFMRFNCIIGPNGSGKSNIMDAVSFVMCEKTSNLRVKS
VRELIHGAHVGQPVSSTASVKIVYCEEDGEEKTFSRVIHGSCSEFLFNDKLVSRSAYISE
LEKIGVLVKARNCLIFQGTVESIAMKKPKERTQLFEQISNSWEYAEDYEKKKKKMQQAEE
DAQFNYNRKKSVAVERKQARIEKEEAEHYQMLLKELDEERIQLQLFQLYHNEKQINFLKN
NLDEKNMEAHIKKEALSTAEDSFKVKKKMFGMLNRDQQHMEKEIKTLEASLIQQRPLYIK
AKENTSYQIKKVEMSKKSLRDKEKACDKEKQNIKELEMELNDIEKAWRAFEEKIGEERIQ
RAADIELGESQLERYRELKEMARKKVAIIAQQLEKLRWEDKGDQERLKLNRRKKNEIEET
IKQTVEQVEEHEKRIEKLEEYAKVCIGSLTEKKQQEEVLAKEIENATIRTAEVNEDLSKI
VSELQNAKIDYHEGRREQMRAEILESLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSK
YMTAIVVATEKVARDCIRFLKQERAEPETFLALDYLDVKPINEKLREIKEAKMLVDVVQT
QFAPLKKVIQFVSGNALICETVKEAKHVAFDGPVRLKTVSLDGTLFLKSGVISGGSSDLR
FKARCWDEKEMNKMKERRDSLINELKDLMRIRRKEADLKQLRAQCQGTQTRLKYSQSELD
LIKKKHLANLFMEKSKLESELVNIEAQHDMLNEGIVQRKEKIEEFQKKINKVEDIVFREF
CEEIGIENIRVYEQEHVRQQEEIDKRRLEFESQRTRLNVQLEYNRDHLQKLTNSVSKLRE
TIHKDEAEIIKLKKDEEKLLKKVNELLEEQQHLKDRLSAHKAELAKSQNEVEECRKVILT
LNREATKLQREATALETSLEEMRLRGHNLLLECKVQDLKIKLLSGSLDDISEVELGTVED
TQTLSGIYEREERIQIDYSPLEVDLKELESDKDIEDQVKQMQQEIKTKEVTLMKTAAPNL
RAEEKLLIARDKFQESIDAFEASKKEARICKQEFEEVKRRRYELFSRCFEHASIAIDRIY
KKLCRNSSAQAFLSPENPEEPYLEGIGFHCVAPGKRFMPMDSLSGGEKTVAALALVFAVH
SFRPAPFFVLDEIDAALDNTNIGKVSSFIREQAHEQFQMIVISLKEEFYYKADALIGVCP
EYNDIMFSQVLTLDLTEYPEEEEQDTTEKPSHGSLFD
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctgaagctgctggtggtaaaggacttcaagtcgtggagggggcagcaggtt
atcggacccttcatgaggttcaactgcatcatcgggcccaatggttcaggaaaatctaac
ataatggatgctgttagctttgtgatgtgtgaaaaaacatcaaatttgcgagttaaaagt
gttcgagaacttattcatggagcacatgttgggcagcctgtttcttccacagctagtgtg
aagatagtatattgtgaggaagatggggaagaaaaaacattttcaagagttatccatggt
agttgttctgagtttcttttcaatgacaagcttgtcagccgatctgcatacatatctgag
cttgagaaaataggcgttcttgtcaaggccaggaattgccttatttttcagggaacagta
gagtcgattgcaatgaagaagccgaaggagagaactcaactttttgaacaaatcagtaat
tcatgggaatatgctgaagactatgaaaaaaagaagaagaaaatgcagcaagcagaagag
gatgcacagtttaattataacaggaaaaaaagtgtggcagtagaacgcaaacaagcaagg
atagaaaaagaggaggcagagcattaccagatgttactcaaggaactggatgaagaaagg
atacagctgcagctttttcagctttatcacaatgaaaaacaaattaactttctgaaaaac
aatttggatgaaaagaatatggaggctcatatcaagaaagaggctctttctacagcagaa
gattcttttaaagtcaagaagaaaatgtttgggatgctaaacagggaccaacagcatatg
gaaaaagaaattaagactctggaggcgtcactgattcagcagagacccctctatataaaa
gcgaaggaaaacacatcctaccaaatcaagaaagtagaaatgtctaaaaaatctctaagg
gacaaggagaaagcctgtgataaggaaaagcagaacataaaagaactagagatggaattg
aatgatattgagaaggcatggagagcgtttgaggagaaaattggagaagagagaatacag
agagcagcagatattgagctgggagaaagtcagttagagcggtacagagagctaaaggaa
atggcaagaaagaaagtagctataatagcccagcagctagaaaaacttcgttgggaggat
aaaggagatcaagaaaggctgaaacttaatcgcaggaagaaaaatgaaattgaggaaacc
attaaacagactgtggagcaggtagaagagcatgaaaaacgcatagagaagttggaagaa
tatgctaaagtatgcattggatcactaacagaaaaaaaacagcaggaggaagtgctggct
aaggaaattgagaatgcaacaatacgaacagctgaagtgaatgaagacttgagcaaaata
gttagtgaactgcagaatgccaaaattgattaccatgaaggaaggcgtgagcagatgaga
gcagagatcctggaaagtctaaaaaggctctacccggattctgtgttcggaagattgctt
gacctgtgtcatcctattcataaaaaataccagcttgctgttaccaaggtgttcagcaaa
tacatgactgctattgttgttgccactgaaaaagtagcaagagattgcattcggttccta
aaacaagaacgagctgaacctgaaacttttcttgctttggattaccttgatgtaaaacca
attaacgagaagttaagggagataaaagaggctaaaatgttggtggatgttgtacaaaca
cagtttgctccactgaaaaaagtgattcagtttgtgagtggaaatgccttgatctgtgaa
acagttaaggaagcaaaacacgttgcatttgatggaccagtgaggttgaaaacggtgtct
cttgatggaactttatttttgaaatctggagtgatttctggaggatcaagtgatttaaga
tttaaagctagatgttgggatgagaaagaaatgaataaaatgaaagaaagaagagatagc
ttgattaatgagttaaaggacttaatgaggatcagacggaaggaggctgacttgaagcag
ttgcgtgctcaatgccaaggaactcagacacgacttaaatattcccagagtgaattagac
cttattaaaaagaaacatcttgctaatctcttcatggaaaaatcaaaactggaaagtgaa
ctggtaaatattgaggctcagcatgatatgctgaatgaaggaatagtgcaaagaaaagaa
aaaatagaagagtttcagaaaaaaattaacaaggttgaagatattgttttccgggaattc
tgtgaagaaattggtatagaaaatattcgtgtgtatgaacaagaacacgtgagacaacaa
gaggagattgataagagaagactggagtttgaaagtcagaggacacggctgaacgttcag
ctggagtataatcgtgatcatctacaaaaattaacaaactcagtcagcaagttgagggag
acaattcataaagatgaagctgagattatcaagctaaagaaggatgaggaaaagcttctt
aaaaaagtaaatgaacttttggaggagcagcaacaccttaaggatagactaagtgctcat
aaagctgagcttgcaaaaagccaaaatgaagttgaagagtgcagaaaggtgatattaact
cttaatagagaagccacaaagttgcagagggaagctacagctctagaaacctcgctggaa
gagatgagattaaggggacataatctgctgcttgaatgcaaggtgcaggacttgaaaatt
aagttactgtctggatcactggacgacatcagtgaagtagagctaggaactgtagaagac
acccagactctatcagggatctatgaaagggaagagagaattcagatagactacagcccc
ctagaagtcgacctaaaggaactagaatctgataaagacatagaggatcaagtaaagcaa
atgcagcaagaaatcaaaactaaagaggtcacattaatgaagacagctgctccaaacctg
agagcagaagagaagttactgatagctcgggacaagttccaggaatccatagatgctttt
gaggccagcaaaaaggaggccagaatatgcaagcaggagtttgaagaggtgaaaagaagg
agatacgagctgtttagccggtgctttgagcatgcctccatagccattgacaggatctac
aagaagctttgcaggaacagtagtgctcaggccttccttagtccagaaaatcctgaggag
ccctatctggaaggcattggctttcactgcgtggctccgggcaagcgctttatgcccatg
gacagcttgtcaggaggggaaaaaacagtggcagccctggctcttgtgtttgctgtacac
agctttcgtccagctcctttttttgttttggatgagatagatgctgcactggataacaca
aacattggtaaagtctcaagtttcattagagaacaggcacatgaacagttccaaatgata
gtcatttccctgaaggaagagttttattacaaggcagatgcattgattggagtgtgtcct
gagtacaatgacattatgttcagccaagtcctgaccctggatcttaccgagtacccagag
gaggaagagcaggacacgacagagaagcccagccatggttctctcttcgactag
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