Pyrgilauda ruficollis (rufous-necked snowfinch): 121363765
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Entry
121363765 CDS
T07608
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
pruf03015
mRNA surveillance pathway
pruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121363765 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
121363765 (NCBP1)
03015 mRNA surveillance pathway
121363765 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121363765 (NCBP1)
03041 Spliceosome [BR:
pruf03041
]
121363765 (NCBP1)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
121363765 (NCBP1)
Spliceosome [BR:
pruf03041
]
Common components
Common spliceosomal components
Cap binding complex
121363765 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
ApoA-II
Motif
Other DBs
NCBI-GeneID:
121363765
NCBI-ProteinID:
XP_041342331
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQAESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgacagcgatgggcagccccacaagagacggaggacg
tccgagccgtcggagatcgaggagaggctcgagtcgctcatctgcagggtgggagagaag
agtaattcatctttggagagcaacctggagggcctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactaagaatactgtgtactgtcgcacgtctgctaccagaa
aagcttactgtttacacgacattggtgggcttgctgaatgccaggaactacaattttggc
ggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtcaacatgtat
aatgaagctgtgcatttagtacgttttctgtccgatctcgtgaattgccatgtaatagct
gcaccttcaatggtagctatgtttgagaactttgtgagtgtgacacaggaggaggacgta
ccccaggtgcgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggaattatatgagaagaaggatgctgaaatggatcgtctcttgtctcaggcagaaagt
tatctgaaacgccgccagaagattcatgtacccatgctgcaagtgtggactgctgataaa
ccacatccacaagaagagtatttagactgcctttggtctcagattcagaaattgaaaaaa
gaccgttggcaagagcggcatatcctgaggccctacttggcttttgacagcgttctctgt
gaggcactgcaacacaatctgcctcccttcacgcccccacctcacactgaagattctgtg
tacccgatgccaagggttatttttagaatgtttgactacacggatgaccctgagggtcct
gtcatgcctggcagccactccgttgagagatttgtaatagaggagaacctccactgcatc
atcaaatctcactggaaagagagaaagacttgtgctgcacagctgttgagctatccggga
aataacaagatccctttgaactaccacatagtagaggtaatatttgcagagttgtttcag
ctgccgtctccaccacatattgaagtcatgtacacaacgctgctgattgagctgtgcaaa
cttcagcctggctccttaccacaagttcttgcgcaagccacagaaatgctctacatgcgt
ttggacacaatgaacactacatgtgtggacagatttattaactggttttcgcaccacttg
agcaactttcagttccgttggagctgggaagactggtcagattgtcttactcaggacctt
gaaaaacccaaacccaaatttgtgagagaggttttggaaaagtgcatgcgactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatccc
gtgtgcatttacaaatacggagatgagagcaataggtctcttcctggatatactgtggca
ctctgtttaacaattgcaattaaaaataaggccagcaacgatgaaatcttcagcatttta
aaagatgtacctaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccct
ctgaaaatagaagtctttgttcaaactctgctccatctagctgcaaagtcttttagccac
tccttcagcgccctggcaaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaagcttcatgttctgagagttgtgtatgaagtttggaagaatcatccacagatgatt
gctgtgctcgtggacaagatgattcggacgcaaattgttgactgtgctgcagtagcaaac
tggatcttttcatcagagttggctcatgattttaccaggttttacatctgggagatctta
cattccacaattcgtaagatgaataagcatgtcctgaagattcacaaagaactggaggag
accaaagcaagattggccaggcagcacaaaagacgagacagtgatgatgacgatgacgat
gatgaccgaagcactgatcgggaagatggaccactggaagagcagatagagcgcttgcag
gaaaaagtagagtcagcccagagtgagcagaagaatctcttccttgttatattccagcgt
ttcattatgttgttaacggagcacttagtgcgctgcgagactggtggaattgatgtattt
acaccttggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtgacgctagagaacctcctgtttacagctgaactggaccac
cacattctggctgtgtttcagcagttctgtgctctgcaggcctga
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integrated database retrieval system
