KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121363767
Entry
121363767         CDS       T07608                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121363767 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pruf03400]
    121363767 (APTX)
Enzymes [BR:pruf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     121363767 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     121363767 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     121363767 (APTX)
DNA repair and recombination proteins [BR:pruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121363767 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     121363767 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_4 FtsK_SpoIIIE_N
Other DBs
NCBI-GeneID: 121363767
NCBI-ProteinID: XP_041342333
LinkDB
Position
Unknown
AA seq 457 aa
MAVREGEALGQSAPASTARIESGPRPARRGRWRPRPAFASPYACALGLSRPRRHRAAPGT
GRRPGRRLPGTFRPFPPRSLRGPGPAPHRPAGGPARSTLLRFCEDSVPTPSSVMRVCWLV
GKEKCTQRVKLPHLEAVVIGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQIGVNPTSV
DLVTIGKDEVVKMKPGQVLHIVNNLYPYTVQFAEESEKTVPKADKIPHEVSCENDDTELV
PRKTMKLEVVDTQGSSTNPKLSNTSVSTHEGTSSKKESLGHWSQGLKSSMQDPKMQVYKD
EKTVVIKDKYPKARYHWLILPWDPISSLKSVTRDHLELLEHMHAIGQKMIEQCPARESLE
FRMGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSQDVIEMVRSKGKVMV
KDHTSELLKLPLRCHRCKQQLSTIPQLKEHLRKHWPK
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggctgttcgggagggggaggcacttggccaatcagcgcccgcctccaccgcccgtatt
gagagtggaccccgccccgcccggcgcgggcggtggcgtccccgcccagcgtttgcttcg
ccttacgcctgcgcgctgggcctctcccgccctcggaggcaccgagctgcaccgggtacg
ggacgccggcccggccgccgccttcccggcactttccgcccctttcctccccgctcccta
cgcgggcctggccccgcgccgcacaggccggccggcggcccagcccgctccactctactg
cgcttttgcgaggactcagtgcccactcccagctcagtgatgcgtgtgtgctggctcgtg
ggcaaagagaaatgcactcagcgagtgaaactgccacacttggaagctgtggtaattggg
cgtggcccagagactgggataacggataagaagtgttcacggcagcaagttcagttaaaa
gcagactgtaacaagggttatgtcacagttaaacagataggggtcaacccaactagtgtt
gatcttgtgactattggcaaggatgaagtggtgaaaatgaagccaggccaagttctgcat
attgtaaataacctttacccctacacggtgcaatttgctgaagagtctgagaaaactgtt
ccaaaagcagataagattccacatgaagtctcctgtgagaatgatgatacagagcttgtg
cccagaaaaaccatgaagttggaggtggtggatacacaaggcagttctacaaatccaaag
ttaagcaataccagtgtatctacacatgaaggcacttcaagcaaaaaggaatctttagga
cactggagtcagggtctaaagagctccatgcaagatccaaaaatgcaggtttacaaagat
gaaaagactgtagtcatcaaggataaatatcccaaagcgcgttaccactggcttatttta
ccatgggaccctatttcaagcctgaagtcagtcaccagggaccaccttgaactcctggaa
catatgcatgccattgggcaaaaaatgattgaacagtgccctgccagagagagcctggag
ttccgaatgggttaccatgctatccccagtatgagtcagctacatttgcatgtaatcagc
caggattttgattctccagccctgaaaaccaaaaagcactggaattcttttactacagac
tacttcttaaattctcaagatgtgatagagatggtaagaagcaagggaaaagtgatggtg
aaagaccatacctctgaacttctcaaacttcccctcagatgccatcgctgtaaacaacag
ctgtccacaatcccacagttaaaggaacatcttcggaaacattggccaaaatga

DBGET integrated database retrieval system