Pyrgilauda ruficollis (rufous-necked snowfinch): 121363802
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Entry
121363802 CDS
T07608
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121363802 (TNRC6C)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121363802 (TNRC6C)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121363802 (TNRC6C)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121363802 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
DUF4718
THOC7
Motif
Other DBs
NCBI-GeneID:
121363802
NCBI-ProteinID:
XP_041342394
LinkDB
All DBs
Position
Unknown
AA seq
1976 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEPIKTSLSQPQPAGTGTSTSTSTLTNSSNG
KRASANGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPAGALSAPGPAPGTAAAAGAS
PPPPPPPPQQGAAAQQHPGKAQPDLSHSGLGDHYENSHWGQQPAFRSEGNCSWDKVIIDR
TDKEAWPSITGAETESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGAN
GALVQSTSNQSALGAGGANGNGSSARVWGVAAGSSSGLAHCSASGGDGKMDNMMGDGRSQ
NCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNP
TGTLGAWGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNG
LPNWGMAVGMGAIIPPHLQGLPGANGTAVSQVSGGSGEGMGSSVWGMSPGNPATGNSNSG
FSQGNGDTVNSALSAKQNGSSSAVQKEGNGANAWDSGPPSGPGVLAWGRGGGGVGSVHSG
AWGHPNRGASNGVNGEWGKPPNQHSNSDINGKGSTGWDSSSVTSPNPAMQQGNEQMNSWA
KAAASGTTASEGSNDSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSN
TGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSV
SGWVNSPPAAVPTNTGWGDNNNKAPNGPGGWGESASSTTVNNAAAAKSGHTWSGTANQED
KSPTWGEPQKPKSQNWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGWDSDNRSG
SGWNDSTKSGTSGWGNGTNSKANTGTSWGESLKPGPQQNWANKPQDNNVSNWGGAASVKQ
TGSGWVGGPVPAKQKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDR
NNPIIQSSTTTNTTTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPAGWGEMPAVHTKSEA
SWGEPSSPSAAVDNGTSAWGKPPSSGTGWGENPAEPAGTYGRTNAPAAAPALCKPASKSM
QEGWGSGGDDVNLSTSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKPKTNPRLSL
GTFWRTEKKRLLKDIVIEKLHKDLLKGMKTSSKQDEAWIMNRLIKQLTDMGFPREPAEEA
LKSNSMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPISKESSMDRPTFLD
KLTLSFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSSRQI
PSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKN
IGLSPAQLTSPINNPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVAR
TINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGLPDLQTK
EQQSSPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTHPNSMDNLSSAA
SSLDQNSSKHGAIPGGLSIGPPGKSSLDDSYGRYDLMQNSESPASPPVAVPHSWSRAKSD
SDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLK
SGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSGPISHTQ
ASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDSSGRTSS
WLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVL
GNTTILAEFAGEEEVNRFLAQGQALPPTSSWQSNTGSTPGRLGSSGSSHGLVRPDAGHWN
PPCLGGKGSSDLLWGGVPQYSSSLWGPPSADDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgaacaaaaaaccaaagtgccagaacctattaagaccagtttaagccagccc
caacctgccggtaccggtaccagtacttccaccagcactctcaccaacagcagcaatggc
aagcgcgcgtctgccaacgggcagcagcctgcggcgtcccgatacctgccccgagaggtg
cctccccgcttccgccagcaggaacagaagcagctcctaaagcgggggcagccactgccc
gccggggctctgagtgcccccggcccggcgccgggcacggcagcagcagcgggagccagc
cctcctcctcctcctcctcctcctcagcagggagcagcagcacagcagcatcccggcaag
gcgcagccagatctcagccacagtggattgggagaccattatgagaattcccactgggga
cagcagcccgctttcaggagtgaaggcaactgcagctgggataaagtgataatagacagg
actgacaaggaagcgtggccttccattaccggagctgagactgagtctgcctcagaatgt
actacagacactgactctgcctccaactgtggctcagagaacagtagcatggctacaggg
agtgcccaaggcaacttcactggacatacaaagaaaactaatggcaataatggcgccaac
ggagcactcgtccaaagcacttctaaccagagtgcccttggagctggtggagccaacggc
aacggcagctcggccagggtgtggggggtggctgcaggctccagctctggcctagctcac
tgctctgccagtggtggggatggaaagatggacaacatgatgggagacggtagaagtcag
aactgctggggtgcttccaactcgaatgctggcattaatcttaaccttaaccctaatgcc
aatccagctgcctggcctgtacttggacatgaaggaactgtgggagcaggcaacccttcc
agtatttgcagtccagtcagtgccataggtcagaacatgggcaaccagaatgggaaccca
acaggcaccttaggtgcttggggaaacttgctgccgcaagagagcacagaaccacaaacg
tccacttctcagaatgtgtctttcagcgtacaacctcagaaccttaacactgatggacca
aataacactaaccccatgaactcttcaccaaaccctatcaatgcaatgcagacaaacgga
ctgccgaactgggggatggccgtgggcatgggggccatcatcccgccccacctgcaaggc
cttcctggtgctaacggaacagcggtttctcaagtcagcgggggcagtggtgaaggaatg
ggcagttcagtatgggggatgtccccaggtaatcctgccacaggaaacagcaattctggg
ttcagtcaggggaatggagacactgtgaactcagcattaagtgctaaacaaaacggatcc
agcagtgctgtgcaaaaggaaggaaacggagcgaacgcgtgggactcggggcctccctct
ggccccggggtcctggcttggggcaggggcggtggcggggttggcagtgtgcattctgga
gcctggggccaccccaaccgcggcgccagcaacggtgtcaacggggagtggggcaagccc
ccaaaccagcattccaatagcgacatcaatgggaaaggatcaacagggtgggatagctcg
agtgttaccagtccgaatcctgccatgcagcagggcaatgaacaaatgaactcttgggcc
aaagctgcggcatctggcaccacggctagtgaaggaagcaacgacagcggtgggagtcaa
aatgaaggcagtactgggagggagggggctggagagggcaggaggagagacaaagggatg
atagaccaagggcaagttcagttgccaagaaatgaccttgaccccagggtcctgtccaat
acggggtggggacagacccctgtgaagcaaaacactgcctgggaatttgaagagtcccca
aggtctgaacggaagaatgacaatggaactgaggcctggggttgtgcagctactcaatct
tcaaactcaggggggaagaacgatgggtccatcatgaacagtacaaatacctcttcagta
tctgggtgggtcaactctccaccggcagctgttccaacaaatacaggttggggagacaat
aacaacaaagcaccaaatggcccaggggggtggggagagtcagcaagctctactactgtt
aataatgctgctgctgccaaaagcggccacacttggagtgggaccgcaaatcaggaggac
aaatcacctacctggggtgaacctcagaaacccaaatctcaaaactggggagatggacag
aaatcaaatccaagctggacttcaggaggtggagactggacagattcatcatctgttcct
ggacacttgggtgatgggaagaagaatggatctggatgggattctgacaatagatcgggg
tctggctggaatgattccacaaagtctgggaccagtgggtgggggaatggcacaaacagc
aaggctaatacaggtacaagttggggggaatctttaaagccaggcccccaacaaaattgg
gctaataaaccccaggacaacaatgtgagtaactggggaggagctgcttctgtaaaacag
acggggtcagggtgggttggtgggccagtgccagccaaacaaaaagagaactgtgaggca
actggctgggaagagccatctccaccgtccattcgccgcaagatggaaatcgatgatggt
acctcagcttggggcgacccaaattacaacaacaacaagactgtaaacatgtgggataga
aataatcctataattcagagcagtaccacaaccaacaccaccaccactagcaccattatc
aacaccaacatggttgaacctcagccatcgcaccagtcaagtgcccagccgaaccggtcc
ccgctgcttggcccagcaggctggggagagatgcctgctgtccacaccaagagcgaagct
tcctggggagagccctcctccccttctgctgcagttgacaatggcacttcggcgtggggg
aagccccccagcagtgggaccgggtggggagagaatcctgccgagccagcagggacctat
ggaagaacaaacgctccagctgctgccccagcactgtgcaaaccagcttcaaaatctatg
caagaaggctggggcagtggtggggatgatgtgaatctcagtactagtcagtgggaagat
gaagaaggagatatgtggaataatactgcttcacaagagagcagctcatcctgtaattcc
tgggggaatgccccgaagaaaggacttcaaaagcccaaaacaaatccgcgcttgtccctt
ggtactttctggagaactgaaaagaagagacttcttaaggatattgtgatagaaaagctg
cacaaagatcttttaaagggcatgaagacatctagcaagcaggatgaggcctggatcatg
aaccgtctgataaaacagctcacagacatgggcttccctagagagccagcggaagaggcc
ttgaagagcaacagtatgaatcttgatcaggccatgagtgctctgctggaaaagaaggtg
gaaatggacaagcgtggaatgggagtgaccgactataatggaatggtcaccaaacccctt
ggctgccgcccaccaccaatctccaaagagtcttccatggaccgccccaccttccttgac
aagctcaccctttctttctccaatcaggatggcggcctagtggaagagcccactacttca
ccatttttgccttcaccaagcctgaagctccccctttcaaacagtgcactccctaatcag
accctgggcgggattgcctcagggctgggcatgcaaaacttgaattcttctagacagata
ccgagtggcaatctgggtatgtttggcaatagcggagcagcacaagccaggaccatgcaa
cagccgcagcaaccgccagtgcaacctcttaattcatcccagcctagtcttcgtgctcaa
gtgcctcagtttctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaac
attggtctcagccctgcacagttaacctcgccaattaataatcctcagcatatgacgatg
ttgaaccagctctatcagctgcagctggcgtaccaacgtttacaaatccagcagcagatg
ttacaggctcagcgtaacgtttccggacccatgagacaacaggagcagcaagttgcacgt
acaatcaataacatgcagcagcagatccagcagcaccagcgccagctggcccaggccctg
ctcatgaagcagcagcctccccctccacatctatctttgcacccctctgcaggcaaatca
gccatggatagcttttcaccccatccccaggctcccggccttcctgacctgcagaccaaa
gagcaacagtcttcaccgaacacctttgctccttaccctcttgctggactgaacccgaac
atgaatgtaaataacatggacattactggtggtttgtcagtgaaggacacttctcagtcc
cagtctcgccttcctcagtggacacaccccaactcaatggataatctgtctagtgctgct
tcttctcttgaccagaactccagcaagcacggtgctatccctggaggtttgagcattggt
cctccgggaaagtcctccctcgatgactcctacggccgctatgatctgatgcagaacagt
gagtctcctgccagcccacctgtagctgttcctcacagctggtcacgtgccaaatccgat
agtgataagatttccaatggctccagcatcaactggccaccagagtttcacccaggagtg
ccatggaaaggactgcagaatattgatcctgaaaatgaccccgatgttactcctggcagt
gttccaactgggcctaccataaacaccacgatacaggatgtgaatcgctatctgctcaag
agtggagggtcatccccaacatcatctcagaatgccacgctgccttcatcgagtgcctgg
ccgcttagtgcctccggctacagtagctctttcagcagcattgcatctgcacctagcatt
gcaggtaaactgtcagacatcaagtccacgtggtcctctggcccaatctctcacacccaa
gcctctctgtcccacgaactctggaaggtacccagaaacactacagctccaaccagacct
cctccaggcttaaccaacaccaagccatcctccacgtggggtgccagtcccctgggctgg
accagctcttactcctctggttctgcatggagtactgacagctcagggagaacaagcagc
tggctggttcttcggaacctcaccccccagatcgatggctccacgctgcgcacgctgtgc
ctgcagcacggccctctcatcacattccacctgaacctgacccaaggcaacgctgtggtc
cgatacagctccaaggaggaggcagccaaggcccagaagtctctgcacatgtgtgtcctg
ggcaacaccaccatcctggcggagtttgctggcgaggaagaagtgaaccgtttcctggcg
caggggcaggcgctgccgcccacctccagctggcagtccaacactggatccacgcccggc
cgcctgggctcctcgggcagctcccacgggctggtgcgccccgacgccggccactggaac
cccccgtgcctggggggcaagggcagcagcgacctgctgtggggaggggtcccccagtac
tccagcagcctttggggaccccccagcgccgacgacggcagagtcatcgggagccccacg
cccctcaacaccctcctgccgggggatctgctcagcggggagtccatctag
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