Pyrgilauda ruficollis (rufous-necked snowfinch): 121363885
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Entry
121363885 CDS
T07608
Symbol
LARP4B
Name
(RefSeq) la-related protein 4B isoform X1
KO
K18763
la-related protein 4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121363885 (LARP4B)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121363885 (LARP4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
Peptidase_M4
Motif
Other DBs
NCBI-GeneID:
121363885
NCBI-ProteinID:
XP_041342568
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MGCCFSKELSNSTSEEKTSLLQKSVEEEAPKSRISKTLSSIFGTVKSQDLHTVGRTVNGA
AVTVGIERVCSDDCAVSDSKSGFWGRKGKYSSYNSMGNTPHASPRRTYGRPFSFFNSFSH
LLKVSGTYGNLQRSEEKKDKIIKKRAPKKLNSNGQRVNNIEKNNSNINNENAASQEHCLF
DHISNSHVADIVDKGLQSEISLNRNSLEDYAVTCDHSRQNETTVNAEDSKSDSLQKVSSS
YREMSSTFSCLDVDNSQNVKDKEFYSICVVDAEDLKGDEEVPATVHEEPAADVDNSAVTD
EGMCTMARPLDRGKEFPVQQLAQVEAKFNSQKELFEYKKEDRSEMEKKDTKEYCSLDIQR
SFDNLLTDRCQVQRLNTDSTVTDALKAKVPGEIIPENQQEEVYIMGSAASWNESLHTACD
SVKPVDAAGEDQYSPNSEKVKNSDHISSVLLNAGVSNSGKTEGSNHSDVVPLVVPLTGHP
SSVEQINTKQVVDNIGGKFKLSLEFHEMDKVEKLDEEVCFLEPESELHSNVEKKTLERTY
GGSQTFSPDSSEHHSSFEESLKEGEECTGTVLHSCEALNMTETQLNLEEGSDFQTPIKDC
AEIRASSEAAIHSGMEEDVCVSATELKGDFLEEAGNLSRTRSGISDGTVTSHAHNPSTDE
MFLKENSLECQVSQELVENKVCKYSNSDNKTSVSSVECEHVNIIDMNSRQDEQQDVCSFH
TVENQWSAETESAKISGHVVESVKQTKFESQLNKSIDNKAENVKQNLDANIVDCDKDLFN
CSEGLPDSQNAPSDSTVPAVTDSCMYRRVKLKDATKNLEDANKLLNKDHNFLPVLCQNAC
SHEHDKPAEEPELCHCASPEPGVGNTQVSIGSFTEERPEINEKSMCDINECNLKDGEVNQ
CASIHANENLTGFGLSAENLEPFTRGNLKQLQAKTTELKNTSYILNTQMNDLTTSWEQMQ
PDHRIFSNKELGVCVDPKQVDKYAATPSYEIPSASPGAAGFQQGREQCVLGLMADGSSDQ
KQSCDLDRQNPHVEMWSHFINLQTGNADWTNQLLSDTVPSGNGEYLVGFLWNNAASNDNM
KNDRLCIVNGNFQNEPENLTSASYAVETYPYQLLAPEYAGTWGWHNKDELESTKVSELNP
NAKVWGNHMLHLEASGATDGSVSKTWEEIPDQPPDSCKEGLDANGDGDKKHQNAVLTELP
EPNPAVPGSEQADMNPLALDHSEYESMHETTQTGGNEQLQPEGQEDLRELLKKTLEFCLS
RENLASDMYLISQMDSDQYVPIMTVANLDHVKKLSTDMDLIVEVLRSLPLVQVDEKGEKV
RPNQNRCIVILREVPESTPIEEVEALFKGDNLPKFINCEFAYNDNWFITFESEADAQQAY
RYLREEVKTFQGKPIKARIKAKAIAINTFLPKNGYRPLDMNLYTQQRYTTSFYIPPVYSP
QQHFPLYSLIGPQTWSATHSYLDPSLVTPFPNTGFINGFTSPTFKPAASPLTTLRQYPPR
NRNPSKSHIRHTIPSAERGPGLLDSPTIFNFSADRLINGVRSPQTRQPGQSRTRVQSATT
SYTKREVGTGRMEQTSVDSSPGLGRGRKNSYGYRKKREDKFTRGQTQSPPPPKPPSPSFE
LGLSSFPPLPGAAGNLKTEDLFENRLSSVVIGTSKERNINVDASTNTIPSGIPREPLPVP
STLPRTFERSPSPPQPTEDSKVVDKQQRETQSTERLSSSTLSTACKSVQVNGSAIELRKP
SYAEICQRTTKDPPTLQPQKEQKPNTVACGKEEKKPTETIEKNREPPPAKSHPGQPKDQR
RQSGRRSSPPAVGKRLNKEQSTPPKSPQ
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctgcttcagtaaagaattgagtaacagcacgagtgaggagaaaaccagcttg
ttacaaaaatctgtggaagaggaagcaccaaagtcaaggataagtaaaactttatcttca
atttttggaactgtgaaaagccaggatctgcatacagtgggaaggacagttaatggggca
gctgtgacagtcggcattgaacgtgtttgtagtgatgattgcgcagtgtcagattctaaa
tctggtttttggggtagaaaaggaaaatattcgtcatataacagcatggggaatactccc
catgcgagccctaggaggacgtatggcagaccttttagcttctttaattcctttagtcac
ctcttgaaagtctctggtacatatggaaatctgcagagaagtgaagaaaagaaagataag
attattaaaaaaagagcacctaaaaaacttaatagtaacggtcagcgtgtgaacaatata
gaaaagaataatagcaatattaataatgaaaatgcagcttcacaagagcattgcttgttt
gatcatatttctaattcacatgtagcagatatcgtagacaaaggcttacagagtgaaatt
tccttaaatagaaattccctggaggattatgcagttacatgtgaccattcaaggcaaaat
gaaacaacagtaaatgctgaagacagcaagagtgacagcttacagaaagtttcaagttca
tatagagagatgtcttcaacattttcctgtcttgatgtagacaacagtcaaaatgtgaaa
gacaaggagttttacagcatttgtgttgtagatgccgaagatctgaaaggggatgaagag
gtgccagctactgtgcatgaagagcctgcagcagacgtagataactcagctgttactgat
gaaggaatgtgcaccatggcacgacctctagacagagggaaggaatttccagtgcaacaa
ttggcacaagtggaagctaagtttaattcacagaaagaactgtttgagtataaaaaagag
gatagatcagaaatggagaaaaaggatacaaaggaatattgtagcctagacatccagcgt
tcttttgataacttactgaccgacaggtgtcaggtgcagaggttaaatactgacagtaca
gtaacagatgcattaaaagcaaaagtgcctggtgaaatcatccctgagaatcagcaagag
gaggtatatatcatgggtagtgctgccagttggaatgaatcactgcatactgcttgtgat
tctgtaaagcctgtggatgctgctggagaggaccaatacagccctaactcagaaaaggtg
aaaaacagtgatcatatttccagtgtattgttaaacgctggagtatctaattcaggaaaa
actgagggaagtaatcattctgatgttgtaccacttgttgtgccactaactgggcatccc
tcaagtgtagagcaaataaatactaaacaggtggtagacaacatagggggtaaatttaaa
ttatcactagagtttcatgaaatggacaaagtagaaaaacttgatgaagaagtctgcttt
ctagagccagaaagtgaactacactcaaatgtggaaaagaaaacacttgaaagaacatat
ggtggtagccaaacattttcaccggactctagcgaacatcacagcagttttgaagaatcc
ttgaaagagggagaggaatgcactggtacagttttgcatagctgtgaagctttgaacatg
actgaaacacagctaaacttggaggaaggctctgattttcaaactcccatcaaggattgc
gctgaaatcagggcatcatctgaagcggcaatccacagtggcatggaggaggatgtctgt
gtgagtgccactgaactaaaaggtgactttcttgaggaagctggtaacttgagcagaact
agatcagggataagcgatggcactgtgacatctcatgcacataatccaagcacagatgaa
atgttcctaaaggaaaacagcctagagtgtcaggtttcacaagagttagtagagaataaa
gtgtgcaaatattcaaattcagataacaaaaccagtgtctcttctgtggaatgtgagcat
gtgaatataatagacatgaacagcagacaagatgaacaacaggatgtgtgttccttccac
acagtggaaaatcaatggagtgcagagactgagtcagccaaaatatctgggcatgtagta
gaatctgtaaaacagacaaaatttgaaagtcaactaaataagtccattgataacaaggca
gaaaatgtaaaacagaatctggatgctaacattgttgattgtgataaagacctcttcaat
tgcagtgaaggcttgcctgacagtcagaatgctccctctgactccactgtacctgcagtc
acggacagttgtatgtacaggagggtaaaattaaaagatgccactaaaaatctggaagat
gccaataaactcttaaataaggaccataactttttgcctgtattgtgtcaaaatgcatgt
tctcatgagcatgacaaaccagcagaagagcctgaattgtgtcactgtgccagtccagag
ccaggagttgggaacactcaagtttctattgggtcttttactgaggaacgaccagaaatt
aatgaaaaaagtatgtgtgatataaatgaatgtaatctcaaggatggtgaagtaaaccag
tgtgccagcatccacgcaaatgagaacctcactggttttggtttatcagctgagaatcta
gaaccttttaccagggggaatttgaagcagttacaagccaagactactgagctgaaaaac
accagttacatattaaatactcagatgaatgacttgaccacaagctgggaacagatgcag
ccagatcataggattttctcaaacaaagagcttggagtttgtgttgacccaaagcaggta
gacaaatatgctgctactccttcctatgaaatacccagtgcctctcctggtgcagcagga
tttcagcaaggcagagagcagtgcgtgttaggtctgatggcagatggatcaagtgaccag
aagcagtcctgtgacctggacagacaaaatccccacgttgaaatgtggtcacatttcatc
aatcttcagactggcaatgctgattggacaaatcagctgctttctgacacggttccttct
ggtaatggtgaatatctagtaggctttttatggaataatgcagcttctaatgataacatg
aagaatgacagactgtgtatagttaatggaaacttccagaatgaacctgaaaatttaaca
agtgcttcatatgcagtggaaacctacccatatcagctgctagcaccggaatatgctggt
acgtggggatggcacaataaagatgaacttgagtcaaccaaggtttctgagttaaacccc
aatgcaaaggtgtggggaaatcatatgttacacttggaagcaagtggtgccactgatggt
agtgtgagcaaaacgtgggaagaaatacctgaccagcctccagattcctgtaaagaagga
ctggatgccaatggcgacggtgacaaaaagcatcagaatgcggtgctgacggagctgccg
gagccgaacccagccgttccgggctcagagcaggcggacatgaaccctttggctctcgat
cattccgagtatgagtctatgcacgaaaccacccagacaggtggaaacgaacagttgcag
ccagaaggtcaggaagatttacgagaattactgaaaaagacactggaattctgtttatcc
agagaaaatcttgccagtgacatgtaccttatatcacagatggacagtgatcagtatgtg
ccaataatgacggtagcaaatcttgatcatgtcaagaaactcagtactgatatggatttg
attgttgaagtgctgagatcgttgcctttagttcaagtggatgaaaagggggaaaaagtt
cggccaaatcagaatcgctgtattgtgattttacgtgaagtacctgaatctactcccatt
gaagaggttgaagcacttttcaaaggagacaatttgcctaagttcatcaactgtgagttt
gcctataatgacaattggttcatcacatttgaatcggaagctgatgcacagcaggcttac
agataccttagagaagaagtgaagactttccaaggaaaaccaattaaggcaaggataaaa
gcaaaggcaatagctataaacacatttttgccaaagaatggatatagacctctggatatg
aacctctacacgcagcagcgctacacaacatccttttacatacctccagtatacagtccc
cagcagcacttcccactgtacagcttaattggcccacagacctggtcagccacacacagc
taccttgacccttcattggtaacaccgtttccaaatactggatttatcaatgggttcaca
tctccaaccttcaagcctgctgcttctccactcacaacactcagacaatatcctcccagg
aacaggaatcctagcaagtcacatatacgacatacaatacccagtgcagaaaggggacct
gggcttctagacagtcctacaatattcaacttttctgctgatcgtttaatcaatggcgtc
aggagtccacagacgcggcagccgggacaaagcaggacacgggtgcagagcgctaccacc
agttacaccaagagggaagtgggaaccggccggatggaacagaccagcgttgactcgtcc
cctggattagggagaggaaggaaaaactcatatggctaccgaaagaaaagggaggacaag
tttacaagaggccaaacacagtctccaccacccccaaaacctccatctcccagctttgaa
ttgggtttatctagctttcctccattacccggggctgctggcaatttaaagactgaagac
ctgtttgaaaacagactgtccagcgtggtaataggaacatcaaaagaaagaaacattaat
gtggatgcaagtacaaacactattccatcaggaattcctcgagagccgttaccagttcct
tctacattgcccaggacctttgaaaggtctccttcgccaccccagcctactgaggactcc
aaagttgtggataaacagcagagagagacacagagtacagaaagactttcttcttccact
ctgagtactgcatgtaaatcggtacaagtcaatgggtctgccatagaactgcgaaaacct
agttatgcggaaatttgccagagaacaactaaggatcctcctacattgcaaccccagaaa
gaacagaagccaaacactgtagcatgtgggaaagaagaaaaaaagcccacagaaacaata
gagaaaaacagagaacctcctcctgcgaagtcacatcctggacaacccaaagaccagaga
agacagtcaggacgcagatcgtcccctccagcggttggcaaacgcttaaataaagaacag
agtacccctccaaaatctcctcagtga
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integrated database retrieval system
