Pyrgilauda ruficollis (rufous-necked snowfinch): 121363891
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Entry
121363891 CDS
T07608
Symbol
ITGB4
Name
(RefSeq) integrin beta-4
KO
K06525
integrin beta 4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04382
Cornified envelope formation
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
pruf04518
Integrin signaling
pruf04810
Regulation of actin cytoskeleton
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121363891 (ITGB4)
04518 Integrin signaling
121363891 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121363891 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121363891 (ITGB4)
04810 Regulation of actin cytoskeleton
121363891 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121363891 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121363891 (ITGB4)
04515 Cell adhesion molecules [BR:
pruf04515
]
121363891 (ITGB4)
04090 CD molecules [BR:
pruf04090
]
121363891 (ITGB4)
Exosome [BR:
pruf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121363891 (ITGB4)
Exosomal proteins of bladder cancer cells
121363891 (ITGB4)
Cell adhesion molecules [BR:
pruf04515
]
Integrins
Integrin beta subunits
121363891 (ITGB4)
CD molecules [BR:
pruf04090
]
Proteins
121363891 (ITGB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
PSI_integrin
I-EGF_1
EGF_Teneurin
EGF_integrin
EGF_TEN
EGF_2
Fn3_PBP1
SEA
vWA_SIBA-E
TMEM52
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
121363891
NCBI-ProteinID:
XP_041342586
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MRRKRMDVPPRACARLLLLSLLCTTGICQWSKNNRCVLSRAKSCTECIQVDKDCSFCTDE
SFEEPRCDLRENLLRSGCGEASLVYTQGEMRTLKNSSINMSLQRTQVSPQAMYMRLRAGE
EMSFNMDVFQPKESPVDLYILMDFSYSMSDDLDNLKSMGHNLADFLQALTSNYTIGFGKF
VDKVSSPQTDMRPEKLREPWHNADSPFSFKNVIRLTSNINHFSQELSKERISGNLDAPEG
GFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDSHG
TYVYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSSN
IVELLRTAFERIRSKMDIRADFTPKALKTEFTSAEFEKTESGSFHITRGKVSKFRMHVKA
LEYVGGQHVCSLPEKDRHGVIHVKPTSLSDSLTVSAAVVCDVCPCEQQQELDSPKCSFHG
NFVCGQCICHPGWRGDTCDCSPASSPNNEACVRPGDAEPCSGRGECLCGKCQCYSEEQSL
RFDGAFCEFDVLQCPRTSGFLCNDRGRCSRGACVCESGWEGPGCECPTSNDTCIDSRGGI
CNNHGRCECGRCICDMASLYTSSTCEISYSLGFQAVCESIRDCVRCQTWGSGNLKGNCSS
CHLQIQMVEELKKEEAGEYCSFQDEDDDCTYHYTLEGDPSVLPNTTVRVQKNKECPPGSF
LWLIPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSS
DHLDTPLVRSGSLQGRDTVRWKIHNNVHKQGVASPAATSPKDLVAYGLSLRLARLFTQNL
TKADTREFEQLRKEVEENLNEVFKHIPGCHKVQQTKFRLQPNSGKRQDHTIVDTVLTAPY
SAKPDIIKAVEKQVSHEAFNDLKVAPGYYTVTSDQDAQGMVEFQEAVELVDVRVPLFIRD
DDDDEKQLQVEAIEVPNGIAKIGRRVVNITIIKEQASSLITFLQPAYSHSRFDKLAKIPV
LREIIDNGKSQVTYRTRDLTAKNGRDYIFTEGELVFQPGETRKEVQVPLLELTEIDTLLN
NCQLKQFAVDLLHPKYGAKIGRYPQTTVTIADPELVDGVPSMTGLAQVPQSPKGRLSAPL
NPDARALSSREISFNWFPPPGKPLGYKVKYWMQGDPESEAHLIDVKTPSAELTNLYPFSD
YEMQVCAYNAVGEGTYSDIVRCRTLEEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGVIT
AYEVSYGLVNEDNVPYGAMKKVLVEDPKKRMVLIENLRESQPYRYTVKARNGAGWGPERE
ATINLATQPKRPMSIPIIPDAPIIDADGGEDYDSYLMYSTDVLRSPGGSKRPSVSDDSGS
RWKFVPLLGEDLDLRRITWRLPPETIPRLSGSSHLSSDTEGLLHEEDSAVAPGTARRSGT
PRPQAEHLMNGRVDFSFPGSGSGTLTRTANTSYHQLSSHVHQEHRVMGSSSLTRDYSTML
MGHDYQGTLLPPIHEDAGRTLLRPRDVGFRSRAKVKGYYPSIGCRDSIIMTDGPTGMCKY
IDSRKPPGIPDTPTRLVFSALGPTSLKVSWQEPRCEKEVQGYSVQYQLLNGGEVHRITIP
NPSQNSVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGTPFTL
STPCAPGPLVFTALSPDSLHLSWERPREPNGPILGYRITCEMLHGGGEPRTIYVEGDNLE
TTLTVPHLSENVPYKFKVQANTTQGFGPEREGLITIESQDRGAFSQFGGQQYTREVYKFP
TEYTTKTSISHSSLDPHFTDGMLVTTQRVENSSSTLTQEFVSHTVMASGTLTQQLERQFY
EA
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagaggatggatgtgccgccacgggcgtgtgccaggctgctcctcctgtcc
ctgctctgcaccacaggcatctgccaatggagcaaaaacaaccgctgtgtgctgtcccga
gcaaagagctgcaccgagtgcatccaggtggataaggactgctccttctgcaccgacgag
agctttgaggagccgcgctgtgacctgcgggagaacctgctgcgctccggctgcggcgag
gccagcctcgtgtacacccagggggagatgaggacgctgaagaattccagtatcaacatg
tccctgcagaggacccaggtgtccccccaggccatgtacatgcggctgcgggctggcgag
gagatgagcttcaacatggatgtcttccagcccaaggagagccctgtggatctctacatc
ctcatggacttctcctactccatgtccgatgatctggacaacctcaaaagcatggggcat
aacctagcggacttcctgcaagccctgacttccaattacaccattggatttggcaagttt
gtggacaaagtctcatcccctcagacagacatgagacccgaaaagctgcgtgagccctgg
cacaacgccgactccccgttctccttcaagaacgtcatccgcctgaccagcaacatcaac
cacttcagccaggagctcagcaaggagcgcatctctggcaacctggatgcccctgagggc
ggctttgatgccatcctgcagacagctgtttgcaaggataagattggctggagaaaggac
agcactcacctgctcgtgttctccaccgagtctgcctttcactatgaagctgatggcaca
aacgtcctggcagggatcctggcgaggaacgatgagcagtgccacctggacagccacggc
acctacgtgtatgacaccaagcaggactatccttcagtgcccaccctcgtgcgcctcttg
ggccagcacaatatcatccccatctttgctgtcaccaaccactcctacagctactatgag
aagctgcacaagtatttccccatctctgagatcggggtgctccaggaagactcttccaac
atcgtggagttgctccgcacagcctttgagcgcatccgctccaagatggacatccgggct
gacttcacccccaaagccctgaagacagagttcacctccgcagaatttgaaaagacagaa
tctggctccttccacatcacccgtggaaaagtgagcaagttccgcatgcacgtgaaggct
ctggagtacgttggtgggcagcacgtctgcagcctccccgagaaggaccggcacggagtc
atccacgtgaagcccacgtccctgagcgacagcctcacggtgtcagctgctgtggtctgc
gacgtgtgtccctgtgaacagcaacaagagttggactcacccaagtgtagtttccatggg
aactttgtgtgtggacagtgcatctgccacccgggctggcgaggggacacgtgcgactgc
tccccggcgtcgtcgcccaacaacgaggcctgcgtgcggcccggggatgcggagccgtgc
tcgggccggggcgagtgcctgtgcggcaagtgccagtgctactccgaggagcagagcctg
cgcttcgacggcgccttctgcgagttcgacgtcctgcagtgcccgcgcacctccggcttc
ctctgcaacgatcgtggccgctgctccaggggcgcctgcgtgtgcgagagcggctgggag
ggcccgggctgtgaatgccccaccagcaacgacacctgcatcgacagccgagggggcatt
tgcaataaccacgggaggtgtgaatgtggcagatgcatctgtgacatggcttcgctgtac
accagctccacctgtgaaatcagctactccctgggcttccaggctgtgtgtgagagcatc
cgggactgtgtccgctgccagacctgggggtcaggcaacctgaaagggaactgcagctcc
tgccacctccagatccagatggtggaggagctgaagaaagaggaggctggtgagtactgc
tccttccaggatgaggatgatgactgcacctaccactacaccctggagggagaccccagt
gtcctccccaacaccaccgtccgtgtgcagaagaataaagagtgcccgcctgggagcttc
ctctggctcatcccactgctcatcttcctcatcctgctcctggggctgctgctcctgctc
tgctggaagttctgtgcctgctgcaaggcttgcctggccctgctgccctgctgcgcacga
ggtcgcaccgttggcttcaaggaggaccactacatgctccgccacagcctcatgtcctcc
gaccacctggacacgcccctggtgcgcagcggctccctgcagggccgggacacggtccgc
tggaagatccacaacaacgtccacaagcagggcgtcgcctcccccgctgccaccagcccc
aaggacctcgttgcctacgggctgtccctgaggctggcccggcttttcacgcagaacctg
acgaaagcggacacgcgggagttcgagcagctgcgcaaggaagtggaggagaacctgaac
gaggttttcaagcacattcctggttgccacaaggtccagcaaaccaagttcaggttacag
cctaattctgggaaaaggcaggatcacaccattgtggacacagtgctcactgccccttac
tcagccaagccagacatcatcaaagcggtggaaaaacaggtttcccatgaggccttcaat
gacctgaaggttgccccgggttattacactgtgacctcagaccaagatgctcagggaatg
gtggagttccaagaggctgtggagctggtggatgtccgtgtcccactcttcatcagggat
gatgatgatgatgagaagcagctgcaggtggaggccatcgaggtccccaacggcatcgcg
aagattgggcgcagggttgtcaacatcaccatcatcaaagagcaagccagcagcctcatc
accttcctgcagccagcctattcccacagccgctttgataagctggccaagatccctgtc
ctcagggagatcatagacaacgggaaatcccaagtcacctacaggacccgggatctcacc
gccaagaatggcagggactacatcttcacggagggtgagctggtcttccagcctggggag
acccgaaaggaggtgcaggtgcccttgctggagctgacagagatagacacccttctcaac
aactgccagctcaagcaatttgctgtcgacctcctccaccccaagtacggcgccaagatt
ggtcgctacccccagaccacggtgaccattgctgacccagagctggtggatggtgtcccc
tccatgactggcctggcccaggtcccccagtcccccaaaggccgcctgagtgcaccactt
aatcccgatgcccgtgccctcagctccagggaaatcagcttcaactggtttcctccacca
ggaaaacccctggggtacaaggtgaaatactggatgcagggagaccctgagtcagaagcc
catctcattgatgtcaaaaccccatcagcagagctgaccaacctttaccccttctctgac
tatgagatgcaagtctgtgcctacaacgccgtgggagaagggacttactcggacatcgtc
cgctgccgcacgctggaggaggtgcccagcgagcccgggcgcttggctttcaacgtcgtg
tcttccaccgtgacccagctgagctgggctgagcctgcagaaaccaacggggtgatcaca
gcctacgaagtcagctacgggcttgtcaacgaggacaatgtaccctatggggccatgaag
aaggtgctggttgaagaccccaagaagcgcatggtgctgatcgagaacctgcgggagtcg
cagccctaccgctacacggtgaaggccaggaacggcgcgggctgggggcccgagagagaa
gccaccatcaacctcgccacacaacccaagcgacccatgtccatccccatcatccctgat
gcccccatcattgatgcagatggaggtgaggactatgacagctacctgatgtacagcaca
gacgtgctccgctctccaggcggcagcaagaggcccagtgtctctgacgattcaggctcc
aggtggaaatttgtgccgttgctgggagaagacctggatcttcgccgcatcacctggagg
ctcccacccgaaaccattccccgcctgtctggcagcagccacctctcctcggacaccgag
gggctcctccatgaggaggacagcgctgtggctcctggcactgcgaggaggagcggcacg
ccccggccccaagcagagcacttgatgaatggccgagtggacttctccttccccggcagt
ggcagtggcaccctgaccaggacagccaacaccagctaccaccagctgagctcccacgtg
caccaggagcacagggtgatgggcagctcctcgctgacaagggactactccacaatgctg
atggggcacgattaccagggaacactcctccctcccatccatgaagatgctgggaggaca
ctcctccggccccgggacgtgggtttcaggagcagggcaaaggtgaagggttactacccc
agcattggctgtcgggactctataatcatgactgatgggcccacagggatgtgcaagtac
atagactccaggaagccaccgggcatccccgacacccccacccgcctggtgttctctgcc
ctgggccccacgtccctgaaggtgagctggcaggagccgcgctgcgagaaggaggtgcag
ggctacagcgtgcagtaccagctcctcaacggaggagaggtgcacaggatcaccatcccc
aaccccagccagaactcggtggtggtggaggacctgctgcccaaccactcctacatcttc
aaggtgaaggcgcagagcgaggagggctggggccccgagagggagggagtcatcaccatc
gagtcccaggtggacccgcagagcccgctcagtcccgtgccaggtacccccttcaccctg
agcaccccctgtgcccctggacccctggttttcactgccctcagcccggattctctgcac
ctcagctgggagaggccccgtgagcccaacgggcccatcctgggctacaggatcacctgt
gagatgctgcatggaggaggggagcctaggacaatctatgttgaaggagacaacctggaa
accaccctgactgtgccccacctgagtgagaatgtcccatacaagttcaaagtgcaagcc
aacaccacccaaggcttcgggccagagagagaaggcctcatcaccattgaatctcaggac
agaggtgctttctcccagtttggaggacagcagtacacgagagaagtttacaaattcccc
actgaatacacaaccaaaaccagcatcagccattcctctctggatccccacttcacagac
gggatgctggtgaccacccagcgcgtggagaactccagcagcaccctgacccaggagttt
gtgagccacacggtgatggccagcgggaccctcacccagcagctggagaggcagttctac
gaggcctga
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integrated database retrieval system
