KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121364039
Entry
121364039         CDS       T07608                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121364039 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pruf03019]
    121364039 (WDR33)
Messenger RNA biogenesis [BR:pruf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     121364039 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Collagen Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 121364039
NCBI-ProteinID: XP_041342867
LinkDB
Position
Unknown
AA seq 1322 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQIGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGSAGPQGHLGPQGLPGSQAHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGSMLG
PPQEMRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLG
DGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSDR
RHEQNSGGPEHGPERGLFRGGQDWSDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPD
KRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDD
RYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRGR
DHGARGRGRGALRGARKGLLPTPDEFPRFEGGRKAESWDGNREPGPRPDHPPHDGHSPAN
RERSSSLQGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERGKGRGNSGPSQRAPKS
GRSSSLDGDHHDGFHREEAFGGGPGAGNNPSRGGRSSSNWGRGNNMNSGQSRRGGSRGGR
GR
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggccacggagatcggctccccgccccgcttcttccacatgccgcgcttccagcaccag
gcgccgcggcagctcttctacaagcggcccgacttcgcccagcagcaggccatgcagcag
ctcaccttcgacgggaagcgcatgaggaaagctgtcaacagaaagaccatagactacaat
ccttccgtcatcaaatatttggagaatagagtgtggcagcgagaccagcgagatatgcga
gcgatccagcccgatgcaggatattacaatgatttagtgcctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggagttcactttatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggagcagatgtgaaatgtgttgactggcatccaaccaaggggttagttgtt
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacactacatgctcacaaaaacacagtgatggaggtgaaactgaatctcaatggc
aactggctgctgacagcttctcgtgaccacctgtgcaagctcttcgacatccggaacctg
aaggaagagcttcaggtcttcagggggcataagaaagaggccacagctgtggcctggcat
cctgttcatgaagggctgtttgccagtggagggtctgatgggtccttgctgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctggcatggcatccccttggacacattctctgttcaggttcaaatgatcacaccagcaag
ttttggactagaaatcgacctggagataaaatgcgagatcgttacaacttgaacctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatctggagcccaacagc
ctggcagttattcctgggatgggaattcctgaacagttgaaaatagctatggagcaggag
cagatggggaaagatgagtccaatgacattgagatgacaatcccaggactggactgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaacccataccagcacagtttcagcaggcatggatgcaaaataaagttcctttgcctccc
ccacctgagccattgaatgatagaaaggaggatattaagctggaggagaaaaagaaatca
caggcagagattgagcaggaaatggcagcacttcagtacacaaacccacagctcctggag
caactgaagattgagagacttgcacaaaagcaagctgagcaggtgcagccaccgccccca
ggaggatctctccatggacctcagcctttcccagggcaaggcccaatgtcacagatgcct
caagggtttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttcagacctccaggaccccaaggacaaataggaccacaa
ggtccattacaccaaggagctggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaagggcctccacaaggaatgccacggcctcaggatttacacggacatcaagga
atgcagagacatccgggccctcatgggccaatggggcccccaggcccacagggcagcgct
ggcccacagggacacttgggaccgcagggcctgcccggctctcaggctcatttaggacca
cagggtccacctggcccacaaggtcacctgggtcctcagggtccccctggaggccaagga
atgcaggggccgcctggtccacgaggaatgcaaggacctcttcctcacggcatgcaagga
gctccaggatctcaaggcatgcagggccctatatctcaagggcctttgatgggacttaat
ccaagagggatgcagggtccaccaggacccagagataaccagggacctaatccacaaggg
atgatgatgggtcatccacaagaaatgagaggtcctcatatgcaaagtggtttactagga
catggtccccaggagatgcggggccttcagggacccccgcctcaaggttcaatgctggga
ccgccgcaagaaatgcgtgggccacccggtccccagggccagcagggacctccacaaggc
tctttggtggggcctcaaggaaacatgcaaggacctcagggacagccaaacccctcgagg
gggccgcacccttcccagggccctctgcccttccagcagcagaaaacgcctctgttgggt
gatgggcctcgcccccccttcaatcaggatggacagaacccaggtcctcctcctctgata
ccaggcctggggcagcaaggaggacaaggtcgtctgggccctcacaaccaaggacctggt
cttaataaaggtgatgcccgtgggccacccaaccatcacctgggcccgctgtcggacagg
cggcacgagcagaacagcggcggccccgagcacgggccagagaggggcctgttccgaggg
ggccaggactggagcgatggcagggacagcaggggcatgcccgacagacggggacctcac
cccgacttccacgatgacttcgatcggcccgacgacttccgggatgatttccacccagac
aagagatttggccatcggttacgggagttcgaggggagaggaggcccaccattgcaagat
gagaaatggagacgagggggacctgggcctccctttcctcctgatcacagggaatttgaa
ggaggtggttccaaccgggggcctcctggtgcttgggaaggacggagaccttcagatgac
agatatccacgggatcccgaggatgcgcgcttccgaggaaggcgagacgagagcttccga
agaggaggaccctcgagacatgagggccgggggcccaggggcagagatggttttcctggc
cctgaagattttgggccagatgatgcttttgactctccagatgaaaactccagaggaagg
gaccatggtgctcgggggcgaggtcgaggtgctctgagaggagctcggaagggtttgctt
cctactccagatgagttcccacgctttgaaggagggaggaaagcagaatcctgggatgga
aacagagaaccaggtcctcgtccagatcaccctcctcatgatgggcactctccagccaac
agagaacgttcctcttcactccagggcatggacatggcctcactgccaccacggaaacgt
ccctggcacgatggaccgggaacctctgaccacagggacatggatgctccaggtggacct
ccagaggagaggggcaaaggacgaggaaattcgggaccttcacagagagcgccaaaatct
gggaggtccagttctctagatggagaccaccacgatggattccacagggaggaagctttt
ggtggaggccctggggcaggcaataacccttctcgaggaggaaggagcagcagcaattgg
ggaagaggaaataacatgaactctggccagtcccggagaggaggatctcggggtggacga
ggccgatag

DBGET integrated database retrieval system