Pyrgilauda ruficollis (rufous-necked snowfinch): 121364049
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Entry
121364049 CDS
T07608
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04136
Autophagy - other
pruf04140
Autophagy - animal
pruf04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121364049 (ATG4B)
04140 Autophagy - animal
121364049 (ATG4B)
04136 Autophagy - other
121364049 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pruf01002
]
121364049 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121364049 (ATG4B)
03029 Mitochondrial biogenesis [BR:
pruf03029
]
121364049 (ATG4B)
Peptidases and inhibitors [BR:
pruf01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
121364049 (ATG4B)
Membrane trafficking [BR:
pruf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121364049 (ATG4B)
Mitochondrial biogenesis [BR:
pruf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121364049 (ATG4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
121364049
NCBI-ProteinID:
XP_041342903
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKEPVWILGRKYSVFTEKEEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQTDNYFSVLNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCQSNVPCAGAAACPALESDVLYNGCPEDGLRGRLTLWKPLVLLIPLRLGLTEINEAYIE
TLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPGDSGCLPDESFHC
QHPPCRMSIAELDPSIAVGFFCNTEADFNDWCQQIRKVCVYRSGQTLEQAQGSGGVPILG
SVQKLSLVRGALPMFELVERQPSHFSNPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctacgcttacctacgacaccctgaggtttgagtatgaagacttccctgag
accaaagaacccgtttggatccttggccggaaatacagtgtttttacagagaaggaagag
atcctgttggatgtgacctctcggctttggttcacctacagaaagaacttccctgctatt
ggaggaaccggtcccacctctgacacgggctggggctgcatgctgcgctgtggccagatg
atctttgctcaggccttggtctgcaggcatttgggaagagactggaggtggataaaaggg
aagaggcagacggataattacttcagtgttcttaatgccttcattgacaaaaaagacagc
tactactccattcatcagatagcccagatgggagtcggggagggaaaatccatcggccag
tggtacggcccgaacacggtcgcacaggtgctcaaaaaacttgcaacttttgatacgtgg
agttccctggcagtacacatagccatggacaacacagtggtgatggaagaaatccggagg
ctgtgccagtccaatgtgccatgtgctggagctgcagcatgccctgccctggagtcagat
gtgctctacaatgggtgcccagaggatgggctcagagggaggctcaccctgtggaaacca
ctggtgctgctgatacctctccgcctcgggctcacagagatcaatgaagcctacatcgaa
acactaaagcactgcttcatgatgccccagtccctgggagtgatcggagggaagccaaac
agtgctcactacttcattggctatgtaggtgaggagctcatttacctggacccccacacc
acgcagccggcggtggagcccggtgacagcggctgcctccccgacgagagcttccactgc
cagcaccccccgtgcaggatgagcatcgccgagctcgacccctccattgccgtgggcttt
ttctgcaacacggaggcagactttaatgactggtgccagcaaatcagaaaggtttgtgtt
tatagatctggtcagacattggaacaggcccagggaagtggcggagtccccatcctggga
agtgttcaaaagctgtccctggtcagaggagcgctgcccatgttcgagctggtggaacgc
cagccctcacacttctccaaccccgacgtcctcaatctcacaccagactcctctgatgcc
gacagattggaaaggttctttgactcagaagatgaagactttgaaatcctgtccctttga
DBGET
integrated database retrieval system
