Pyrgilauda ruficollis (rufous-necked snowfinch): 121364065
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Entry
121364065 CDS
T07608
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121364065 (ZEB1)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121364065 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
121364065
NCBI-ProteinID:
XP_041342939
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MADGPRCKRRKQPNPRRNNVTNYNNVVEGNSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHIVLPENSERDGSTNTCWEDEAGKERKEILGPEAQTDEIGCTVKEDECDSDAENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSNPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPANSCKNEKLPQDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGAEAEKPESPVPSETGENNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKSSSPAEND
DQAATSNVSEPQNSTNNSQNPVSTTKSQTLPGASALNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVHETPPKQTQANGNQDERQDTSSEGISNLEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKRETEERDSAEPEEMGPEVLSSEHVVVRASPSQ
IDSDERESLTREEEEYSEKEEEEDEEKDIEGLQEEKECRELQEVGDAEEVAAVEEEEGKT
EGDKNDEAVNQASNAEPEVIQNNGQVSEENNE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgtc
accaattataacaatgtggtagaaggaaactcagactcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacggatgcagcagactgtgatgctagtgtgccagaagat
gacttgccaacggaccatatagtgttaccagaaaacagtgaaagggacgggagtacaaac
acttgttgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcag
acagatgaaattggatgtacagtgaaagaagatgaatgtgattctgatgcagagaatgag
caaaaccatgaccctaatgttgaagaattccttcaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagagacaaggcacgccagaagctagtggtcaggatgaa
aatggaacacctgacgcgttttcccagctgctcacctgcccgtactgcgatcgcgggtac
aagcgctttacctctctgaaggaacacatcaaataccgccatgaaaaaaacgaggataac
ttcagctgctccttgtgcagttacacgtttgcgtacagaacgcagctcgaccgccacatg
acatcacacaaatcaggaagagacccaagacatgtgacgcagtccagcggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccggtcagggctcaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgctcaaaccctttgcaaaatggggtttttagtggtggtagc
ccgttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactaaaagtggca
gtggatggtaatgtaataaggcaagtactggaaaacaatcatgctaaccttgcatccaaa
gaacaagaaacaatcaacaatgcatctatacaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcttg
gagcagccaagtcaacttcaggttgttccacaaaatctaaaaaaagaaaactctgttcct
gcaaatagttgcaaaaatgagaaattaccacaagatctcacagtgaagtctgagaaagat
aagaactttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggagcagaagctgagaaacccgagtcccctgtcccatcagaaaccggggag
aacaacttgtctcctggtcagccacctttaaagaaccttctgtcgctcctaaaagcgtat
tatgcattaaatgcacaaccaagcgcagaagagctttcaaaaatagcagattctgtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacaaatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaatcaagcagtcctgcagaaaacgat
gatcaagcagcaacttcaaatgtgagtgaaccccagaacagcacaaataactcacaaaat
cctgtcagtacaacaaaatctcagactttaccaggggcttcagctctgaatggttcacac
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacggcagagggtgtacaagaagagccacaaatagaacctcttgacctttcgcta
ccaaagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacatgtgcaaaaaaagaaccacaaaag
gacaacagtgttacagactctgatcctattgtaaatgttatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatacatactccactacagttagtcctgcagttcatgagacaccaccaaaa
cagacccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaatatca
aatttagaagatcaaaacgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcgtta
ttgagacataagtatgaacacacaggtaaaagacctcacgagtgtggaatctgtacaaaa
gcgtttaaacacaaacaccatttgattgaacacatgcgactgcattctggggaaaagccc
taccaatgtgacaagtgtggaaagaggttttcacactcggggtcttactctcaacacatg
aaccatcgctactcctactgcaaaagggagacggaggagcgcgacagcgccgagcccgag
gagatgggccccgaggtgctgagcagcgagcacgtggtggtcagggcgtccccctcgcag
atcgactcggatgagagggagagtctgaccagggaggaggaggaatacagtgaaaaagag
gaagaggaggatgaagaaaaagacatagagggacttcaggaagaaaaagaatgtagggaa
ctacaagaagtaggggatgcagaagaagtagcagcggtagaagaggaagaagggaaaact
gaaggtgacaagaacgatgaagctgtaaatcaagcaagcaatgcagaaccagaagttata
caaaataatgggcaggtgtcagaagaaaataatgaataa
DBGET
integrated database retrieval system
