Pyrgilauda ruficollis (rufous-necked snowfinch): 121364150
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Entry
121364150 CDS
T07608
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121364150 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121364150 (PAN3)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121364150 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
121364150 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
121364150
NCBI-ProteinID:
XP_041343101
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MNSSGLPCSSPSPVVGPPPGAGVGVAGPAAGGAGAXGGGGGAVKLKFCRYYAKDKTCFYG
EECQFLHEEPGAAPAGPGPAAPPLGGLPLGIPPPAAAAGPGYSAHGASSGPAAAVVGPKK
AELGAGGGGGGGGGGLDGPRLAIPGMDGGGLADANLTDSYFSTSFIGVNGFGSPAETKYP
MMQRMTNSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFIT
DLEDRYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTE
NNLQTPNPSASEFIPKGGSTSRMSNVSQSNMSAFSQALFSHPSMGSPATAGLAPGMSLSA
GSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVG
GTTYFYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLI
TMAQIDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYC
LRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMM
SRHFNDPSADSYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACR
VMDPTKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACN
SLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAA
QMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFH
QVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELI
AAANGQL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagcggcctgccctgctcgtcgccgtcgccggtggtggggccgccgccgggg
gcgggggtcggcgtggcgggtccggcggccggcggggcgggggccgncggcggcggcggc
ggggccgtgaagctgaagttctgccgctactacgccaaggacaagacctgcttctacggc
gaggagtgccagttcctgcatgaggagccgggcgccgcccccgccggcccggggcccgcc
gcaccccccctcggcgggctccctctcggcatccccccgcccgccgccgccgccgggccg
ggctactcggctcacggggccagctcgggcccggcggcagcggtggtggggcctaaaaaa
gccgagctgggggcgggaggcggcggaggcggcggcggcggggggctggatggcccacgg
ctggcgattcccggaatggatggtggtgggttagctgatgctaatctaacggattcatac
tttagcaccagcttcattggcgttaatggatttggaagtcctgctgaaacgaagtatccc
atgatgcagaggatgacaaatagcagcagctcccctagccttctcaatgacagtgccaag
cagtatgcaggccatgatccactaacttcaccaaattcatccttgtttaatgactttgct
gccctcagcgtgtctcaaaggaggaagctggcaaaaccagcatttccttcgttcatcact
gacttggaggacagatataatacagtcttgcccaggaagtatcgactgggaatgctggat
gagaggatagttccggtgggatcaaaagcaagaaaatcaaagaaccctattggctgtctg
gctgacaggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatccttctgcaagtgagtttattcctaaaggaggatcaacc
tccaggatgagtaatgtatcccagtcaaatatgtctgccttctctcaagccttgttctct
cacccctccatgggaagtcctgctactgctgggttagcaccaggaatgtcattgtcagca
ggatcttctcctcttcattctcccaaaataactcctcatacatctcctgctcctcgaaga
agaagtcatactcctaacccagcaaactatatggtgcctactagtgcctctgcgtctgtc
gctaacgctgtctctcagcctccatctactggccaggttatccagaaggaaacagtgggt
ggaacaacatacttctacactgatacaactccagcacctctcacaggaatggtttttcca
aactaccacatctaccatccagctgcacctcatgttgcttacatgcagccaaaagcaaat
gcaccttccttcttcatggcagatgagctcagacaggaactcatcaacagacacttaata
actatggcccagattgatcaggctgatattcctgcagttcctgcggaagtggacagctac
cacagtctctttcctttggaaccactgccaccgcccaatcggatacagaaaacgagcaac
tttgggtacattacatcgtgctataaagctgtaaatagtaaagatgacctgccgtattgc
cttcggaggatacatggtttccgtcttgttaacacaaagtgcatggtattggttgacatg
tggaaaaagattcagcactcaaatatcgtaactttgcgtgaagtgtttaccactaaagct
tttggagaacattctttagtgtttgcctatgattttcatgctggaggagagactatgatg
agcagacacttcaatgaccctagtgctgattcctatttcacaaaacggaaatggggtcag
catgatggacctctgccacggcagcatgcggggttgcttccagagtctttgatatgggct
tatattgtgcagctcagctctgccttacggaccattcacacagcaggactggcatgcaga
gttatggatccaacgaagattctggtaacaggcaaaacaaggttacgagttaattgtgtt
ggaatctttgacgttttgacatttgacaacagtcaaaataatccactggcattaatggct
cagtttcagcaagcagatctgatctccctggggaaagttgtgttggctttggcttgcaat
tctttatcaggaattcagagagagaatttgcagaaagcaatggaactggtgacaatcaac
tattcctctgatctgaagaatctgattttgtatttgctgactgaccaaaacagacttcgc
agtgtaaacgatatcatgcctatgattggtgcacgattctatactcagttggatgctgct
cagatgcgaaatgatgttatagaagaagatctagcaaaggaggtgcaaaatggaaggttg
tttaggctcctagcaaaattgggaacaatcaatgagaggccagagtttcagaaggaccca
acgtggtcagaaactggagacaggtatttactaaagctctttcgagatcaccttttccat
caggtgacagaagcgggtactccttggattgacctcagtcacattatctcatgtcttaac
aagttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgta
cttgtggtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactgatt
gcagccgcaaatggtcagttgtag
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